RNA–Protein interactions for RNA: ENST00000544584.1

CLSTN3-215, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-215ENST00000544584 CCDC171Q6TFL3 1326 aa6.62□□□□□ -1.35
CLSTN3-215ENST00000544584 RAD50Q92878 1312 aa6.62□□□□□ -1.35
CLSTN3-215ENST00000544584 RANBP6O60518 1105 aaKnown RBP6.62□□□□□ -1.35
CLSTN3-215ENST00000544584 TFRCP02786 760 aaKnown RBP6.62□□□□□ -1.35
CLSTN3-215ENST00000544584 CENPBP07199 599 aaPredicted RBP6.62□□□□□ -1.35
CLSTN3-215ENST00000544584 GJB1P08034 283 aa6.62□□□□□ -1.35
CLSTN3-215ENST00000544584 FCER1AP12319 257 aa6.62□□□□□ -1.35
CLSTN3-215ENST00000544584 EEF2P13639 858 aaKnown RBP6.62□□□□□ -1.35
CLSTN3-215ENST00000544584 AKR1B1P15121 316 aa6.62□□□□□ -1.35
CLSTN3-215ENST00000544584 SDSP20132 328 aa6.62□□□□□ -1.35
CLSTN3-215ENST00000544584 SLC1A4P43007 532 aa6.62□□□□□ -1.35
CLSTN3-215ENST00000544584 GJA8P48165 433 aa6.62□□□□□ -1.35
CLSTN3-215ENST00000544584 TFAP4Q01664 338 aa6.62□□□□□ -1.35
CLSTN3-215ENST00000544584 SART3Q15020 963 aaKnown RBP6.62□□□□□ -1.35
CLSTN3-215ENST00000544584 KIAA1211Q6ZU35 1233 aa6.62□□□□□ -1.35
CLSTN3-215ENST00000544584 GPR142Q7Z601 462 aa6.62□□□□□ -1.35
CLSTN3-215ENST00000544584 CCDC84Q86UT8 332 aaPredicted RBP6.62□□□□□ -1.35
CLSTN3-215ENST00000544584 FAM160B2Q86V87 743 aa6.62□□□□□ -1.35
CLSTN3-215ENST00000544584 PLEKHM2Q8IWE5 1019 aa6.62□□□□□ -1.35
CLSTN3-215ENST00000544584 NEDD1Q8NHV4 660 aa6.62□□□□□ -1.35
CLSTN3-215ENST00000544584 MKL1Q969V6 931 aa6.62□□□□□ -1.35
CLSTN3-215ENST00000544584 MPHOSPH6Q99547 160 aaKnown RBP6.62□□□□□ -1.35
CLSTN3-215ENST00000544584 APBA2Q99767 749 aa6.62□□□□□ -1.35
CLSTN3-215ENST00000544584 ARHGAP39Q9C0H5 1083 aa6.62□□□□□ -1.35
CLSTN3-215ENST00000544584 HMX1Q9NP08 348 aaPredicted RBP6.62□□□□□ -1.35
CLSTN3-215ENST00000544584 MTMR4Q9NYA4 1195 aa6.62□□□□□ -1.35
CLSTN3-215ENST00000544584 FRMD4AQ9P2Q2 1039 aaPredicted RBP6.62□□□□□ -1.35
CLSTN3-215ENST00000544584 ANAPC4Q9UJX5 808 aa6.62□□□□□ -1.35
CLSTN3-215ENST00000544584 FEM1BQ9UK73 627 aa6.62□□□□□ -1.35
CLSTN3-215ENST00000544584 STX8Q9UNK0 236 aa6.62□□□□□ -1.35
CLSTN3-215ENST00000544584 ARIH1Q9Y4X5 557 aaPredicted RBP6.62□□□□□ -1.35
CLSTN3-215ENST00000544584 CACNA1AO00555 2505 aa6.62□□□□□ -1.35
CLSTN3-215ENST00000544584 SALL3Q9BXA9 1300 aa6.61□□□□□ -1.35
CLSTN3-215ENST00000544584 ERICH2A1L162 156 aa6.61□□□□□ -1.35
CLSTN3-215ENST00000544584 SPDYE16A6NNV3 312 aaPredicted RBP6.61□□□□□ -1.35
CLSTN3-215ENST00000544584 B4DLN1 442 aa6.61□□□□□ -1.35
CLSTN3-215ENST00000544584 POTEB2H3BUK9 544 aa6.61□□□□□ -1.35
CLSTN3-215ENST00000544584 M0R2C6 588 aa6.61□□□□□ -1.35
CLSTN3-215ENST00000544584 TNFRSF10AO00220 468 aa6.61□□□□□ -1.35
CLSTN3-215ENST00000544584 ORC4O43929 436 aa6.61□□□□□ -1.35
CLSTN3-215ENST00000544584 EIF5BO60841 1220 aaKnown RBP6.61□□□□□ -1.35
CLSTN3-215ENST00000544584 IGHDP01880 384 aa6.61□□□□□ -1.35
CLSTN3-215ENST00000544584 INHAP05111 366 aa6.61□□□□□ -1.35
CLSTN3-215ENST00000544584 CYP2D6P10635 497 aa6.61□□□□□ -1.35
CLSTN3-215ENST00000544584 HSPD1P10809 573 aaKnown RBP6.61□□□□□ -1.35
CLSTN3-215ENST00000544584 CCL5P13501 91 aa6.61□□□□□ -1.35
CLSTN3-215ENST00000544584 RASA1P20936 1047 aa6.61□□□□□ -1.35
CLSTN3-215ENST00000544584 DSG3P32926 999 aa6.61□□□□□ -1.35
CLSTN3-215ENST00000544584 STAT2P52630 851 aa6.61□□□□□ -1.35
CLSTN3-215ENST00000544584 MRPL12P52815 198 aaKnown RBP6.61□□□□□ -1.35
CLSTN3-215ENST00000544584 TRAF1Q13077 416 aa6.61□□□□□ -1.35
CLSTN3-215ENST00000544584 KCTD2Q14681 263 aa6.61□□□□□ -1.35
CLSTN3-215ENST00000544584 RRP1BQ14684 758 aaKnown RBP6.61□□□□□ -1.35
CLSTN3-215ENST00000544584 MTFR1Q15390 333 aa6.61□□□□□ -1.35
CLSTN3-215ENST00000544584 SAMD1Q6SPF0 538 aaPredicted RBP6.61□□□□□ -1.35
CLSTN3-215ENST00000544584 CWC27Q6UX04 472 aaKnown RBP6.61□□□□□ -1.35
CLSTN3-215ENST00000544584 CENPQQ7L2Z9 268 aaPredicted RBP6.61□□□□□ -1.35
CLSTN3-215ENST00000544584 SPICE1Q8N0Z3 855 aa6.61□□□□□ -1.35
CLSTN3-215ENST00000544584 ANKLE1Q8NAG6 615 aa6.61□□□□□ -1.35
CLSTN3-215ENST00000544584 SLC44A5Q8NCS7 719 aa6.61□□□□□ -1.35
CLSTN3-215ENST00000544584 GMCL1P1Q8NEA9 526 aa6.61□□□□□ -1.35
CLSTN3-215ENST00000544584 ACER1Q8TDN7 264 aa6.61□□□□□ -1.35
CLSTN3-215ENST00000544584 OTUD7AQ8TE49 926 aaPredicted RBP6.61□□□□□ -1.35
CLSTN3-215ENST00000544584 SH3TC2Q8TF17 1288 aa6.61□□□□□ -1.35
CLSTN3-215ENST00000544584 TTC14Q96N46 770 aa6.61□□□□□ -1.35
CLSTN3-215ENST00000544584 SLF1Q9BQI6 1058 aa6.61□□□□□ -1.35
CLSTN3-215ENST00000544584 DSCC1Q9BVC3 393 aa6.61□□□□□ -1.35
CLSTN3-215ENST00000544584 KRT23Q9C075 422 aa6.61□□□□□ -1.35
CLSTN3-215ENST00000544584 SPATC1LQ9H0A9 340 aa6.61□□□□□ -1.35
CLSTN3-215ENST00000544584 RBPJLQ9UBG7 517 aa6.61□□□□□ -1.35
CLSTN3-215ENST00000544584 NRBP1Q9UHY1 535 aa6.61□□□□□ -1.35
CLSTN3-215ENST00000544584 U3KPZ7 1027 aaPredicted RBP6.61□□□□□ -1.35
CLSTN3-215ENST00000544584 CDH23Q9H251 3354 aa6.6□□□□□ -1.35
CLSTN3-215ENST00000544584 MYH7P12883 1935 aa6.6□□□□□ -1.35
CLSTN3-215ENST00000544584 NAV1Q8NEY1 1877 aa6.6□□□□□ -1.35
CLSTN3-215ENST00000544584 PLIN4Q96Q06 1357 aa6.6□□□□□ -1.35
CLSTN3-215ENST00000544584 CYP2D7A0A087X1C5 515 aa6.6□□□□□ -1.35
CLSTN3-215ENST00000544584 F5H6K3 240 aa6.6□□□□□ -1.35
CLSTN3-215ENST00000544584 EVI5O60447 810 aa6.6□□□□□ -1.35
CLSTN3-215ENST00000544584 PRDM1O75626 825 aa6.6□□□□□ -1.35
CLSTN3-215ENST00000544584 ECM2O94769 699 aaPredicted RBP6.6□□□□□ -1.35
CLSTN3-215ENST00000544584 SGPL1O95470 568 aa6.6□□□□□ -1.35
CLSTN3-215ENST00000544584 MYCP01106 439 aaPredicted RBP6.6□□□□□ -1.35
CLSTN3-215ENST00000544584 FGAP02671 866 aa6.6□□□□□ -1.35
CLSTN3-215ENST00000544584 SLURP2P0DP57 97 aa6.6□□□□□ -1.35
CLSTN3-215ENST00000544584 BMP3P12645 472 aa6.6□□□□□ -1.35
CLSTN3-215ENST00000544584 CYP2B6P20813 491 aa6.6□□□□□ -1.35
CLSTN3-215ENST00000544584 GUCY1A2P33402 732 aa6.6□□□□□ -1.35
CLSTN3-215ENST00000544584 STAT3P40763 770 aa6.6□□□□□ -1.35
CLSTN3-215ENST00000544584 OAZ1P54368 228 aa6.6□□□□□ -1.35
CLSTN3-215ENST00000544584 KLRC3Q07444 240 aa6.6□□□□□ -1.35
CLSTN3-215ENST00000544584 MAP2K5Q13163 448 aa6.6□□□□□ -1.35
CLSTN3-215ENST00000544584 TKFCQ3LXA3 575 aa6.6□□□□□ -1.35
CLSTN3-215ENST00000544584 AKNAD1Q5T1N1 836 aa6.6□□□□□ -1.35
CLSTN3-215ENST00000544584 SLFN13Q68D06 897 aa6.6□□□□□ -1.35
CLSTN3-215ENST00000544584 NCAPG2Q86XI2 1143 aa6.6□□□□□ -1.35
CLSTN3-215ENST00000544584 TDHQ8IZJ6 230 aa6.6□□□□□ -1.35
CLSTN3-215ENST00000544584 MSL3Q8N5Y2 521 aaKnown RBP6.6□□□□□ -1.35
CLSTN3-215ENST00000544584 STAG1Q8WVM7 1258 aa6.6□□□□□ -1.35
CLSTN3-215ENST00000544584 DDX11Q96FC9 970 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms