RNA–Protein interactions for RNA: ENST00000544550.5

SNHG1-220, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-220ENST00000544550 GOLGA6L2Q8N9W4 650 aaPredicted RBP5.22□□□□□ -1.57
SNHG1-220ENST00000544550 TTLL11Q8NHH1 800 aa5.22□□□□□ -1.57
SNHG1-220ENST00000544550 DIS3LQ8TF46 1054 aaKnown RBP5.22□□□□□ -1.57
SNHG1-220ENST00000544550 HINFPQ9BQA5 517 aa5.22□□□□□ -1.57
SNHG1-220ENST00000544550 LBHD1Q9BQE6 289 aaPredicted RBP5.22□□□□□ -1.57
SNHG1-220ENST00000544550 TMEM39BQ9GZU3 492 aa5.22□□□□□ -1.57
SNHG1-220ENST00000544550 GREM2Q9H772 168 aa5.22□□□□□ -1.57
SNHG1-220ENST00000544550 TMOD2Q9NZR1 351 aa5.22□□□□□ -1.57
SNHG1-220ENST00000544550 CXXC1Q9P0U4 656 aaPredicted RBP5.22□□□□□ -1.57
SNHG1-220ENST00000544550 GABRQQ9UN88 632 aa5.22□□□□□ -1.57
SNHG1-220ENST00000544550 KCNH4Q9UQ05 1017 aa5.22□□□□□ -1.57
SNHG1-220ENST00000544550 PCDHAC2Q9Y5I4 1007 aa5.22□□□□□ -1.57
SNHG1-220ENST00000544550 IVNS1ABPQ9Y6Y0 642 aa5.22□□□□□ -1.57
SNHG1-220ENST00000544550 KIAA0100Q14667 2235 aaKnown RBP5.21□□□□□ -1.57
SNHG1-220ENST00000544550 RPAP1Q9BWH6 1393 aaPredicted RBP5.21□□□□□ -1.58
SNHG1-220ENST00000544550 CXCL11O14625 94 aa5.21□□□□□ -1.58
SNHG1-220ENST00000544550 PRMT3O60678 531 aa5.21□□□□□ -1.58
SNHG1-220ENST00000544550 ADH1AP07327 375 aa5.21□□□□□ -1.58
SNHG1-220ENST00000544550 ELNP15502 786 aa5.21□□□□□ -1.58
SNHG1-220ENST00000544550 SMPD1P17405 629 aa5.21□□□□□ -1.58
SNHG1-220ENST00000544550 KLRK1P26718 216 aa5.21□□□□□ -1.58
SNHG1-220ENST00000544550 ARID4AP29374 1257 aaPredicted RBP5.21□□□□□ -1.58
SNHG1-220ENST00000544550 EPHA4P54764 986 aa5.21□□□□□ -1.58
SNHG1-220ENST00000544550 CHRNDQ07001 517 aa5.21□□□□□ -1.58
SNHG1-220ENST00000544550 MAP3K12Q12852 859 aa5.21□□□□□ -1.58
SNHG1-220ENST00000544550 CBLBQ13191 982 aa5.21□□□□□ -1.58
SNHG1-220ENST00000544550 MFSD14BQ5SR56 506 aa5.21□□□□□ -1.58
SNHG1-220ENST00000544550 Q6ZVU0 165 aa5.21□□□□□ -1.58
SNHG1-220ENST00000544550 FAM83AQ86UY5 434 aa5.21□□□□□ -1.58
SNHG1-220ENST00000544550 DZIP1LQ8IYY4 767 aaKnown RBP5.21□□□□□ -1.58
SNHG1-220ENST00000544550 KDF1Q8NAX2 398 aaPredicted RBP5.21□□□□□ -1.58
SNHG1-220ENST00000544550 SMCR8Q8TEV9 937 aaPredicted RBP5.21□□□□□ -1.58
SNHG1-220ENST00000544550 ZKSCAN4Q969J2 545 aaPredicted RBP5.21□□□□□ -1.58
SNHG1-220ENST00000544550 ITPKCQ96DU7 683 aa5.21□□□□□ -1.58
SNHG1-220ENST00000544550 XAGE2Q96GT9 111 aa5.21□□□□□ -1.58
SNHG1-220ENST00000544550 PRIMPOLQ96LW4 560 aa5.21□□□□□ -1.58
SNHG1-220ENST00000544550 METTL22Q9BUU2 404 aaPredicted RBP5.21□□□□□ -1.58
SNHG1-220ENST00000544550 C1QTNF1Q9BXJ1 281 aa5.21□□□□□ -1.58
SNHG1-220ENST00000544550 ZNF341Q9BYN7 854 aa5.21□□□□□ -1.58
SNHG1-220ENST00000544550 SEMA6BQ9H3T3 888 aa5.21□□□□□ -1.58
SNHG1-220ENST00000544550 TDRD3Q9H7E2 651 aaKnown RBP5.21□□□□□ -1.58
SNHG1-220ENST00000544550 PRKAG2Q9UGJ0 569 aa5.21□□□□□ -1.58
SNHG1-220ENST00000544550 OGDHLQ9ULD0 1010 aa5.21□□□□□ -1.58
SNHG1-220ENST00000544550 TTF2Q9UNY4 1162 aaKnown RBP5.21□□□□□ -1.58
SNHG1-220ENST00000544550 SLC45A1Q9Y2W3 748 aa5.21□□□□□ -1.58
SNHG1-220ENST00000544550 HCN4Q9Y3Q4 1203 aa5.21□□□□□ -1.58
SNHG1-220ENST00000544550 COL6A3P12111 3177 aa5.21□□□□□ -1.58
SNHG1-220ENST00000544550 CENPFP49454 3210 aa5.21□□□□□ -1.58
SNHG1-220ENST00000544550 SYNGAP1Q96PV0 1343 aa5.21□□□□□ -1.58
SNHG1-220ENST00000544550 H3BM21 787 aa5.2□□□□□ -1.58
SNHG1-220ENST00000544550 CHL1O00533 1208 aa5.2□□□□□ -1.58
SNHG1-220ENST00000544550 LGR5O75473 907 aa5.2□□□□□ -1.58
SNHG1-220ENST00000544550 ZIC2O95409 532 aaPredicted RBP5.2□□□□□ -1.58
SNHG1-220ENST00000544550 TIMP2P16035 220 aa5.2□□□□□ -1.58
SNHG1-220ENST00000544550 ITGA6P23229 1130 aa5.2□□□□□ -1.58
SNHG1-220ENST00000544550 CRKP46108 304 aa5.2□□□□□ -1.58
SNHG1-220ENST00000544550 WDR4P57081 412 aaKnown RBP5.2□□□□□ -1.58
SNHG1-220ENST00000544550 SMAD3P84022 425 aaKnown RBP5.2□□□□□ -1.58
SNHG1-220ENST00000544550 HDLBPQ00341 1268 aaKnown RBP5.2□□□□□ -1.58
SNHG1-220ENST00000544550 NEXNQ0ZGT2 675 aa5.2□□□□□ -1.58
SNHG1-220ENST00000544550 FKBP1CQ5VVH2 108 aa5.2□□□□□ -1.58
SNHG1-220ENST00000544550 CCER1Q8TC90 406 aaPredicted RBP5.2□□□□□ -1.58
SNHG1-220ENST00000544550 ZFAND3Q9H8U3 227 aa5.2□□□□□ -1.58
SNHG1-220ENST00000544550 HRH3Q9Y5N1 445 aa5.2□□□□□ -1.58
SNHG1-220ENST00000544550 AOX1Q06278 1338 aa5.2□□□□□ -1.58
SNHG1-220ENST00000544550 ANKRD18BA2A2Z9 1011 aa5.19□□□□□ -1.58
SNHG1-220ENST00000544550 GDF11O95390 407 aa5.19□□□□□ -1.58
SNHG1-220ENST00000544550 IL2RAP01589 272 aa5.19□□□□□ -1.58
SNHG1-220ENST00000544550 CYP2C8P10632 490 aa5.19□□□□□ -1.58
SNHG1-220ENST00000544550 IGFBP4P22692 258 aa5.19□□□□□ -1.58
SNHG1-220ENST00000544550 PTGIRP43119 386 aa5.19□□□□□ -1.58
SNHG1-220ENST00000544550 FOXK2Q01167 660 aa5.19□□□□□ -1.58
SNHG1-220ENST00000544550 KRT24Q2M2I5 525 aa5.19□□□□□ -1.58
SNHG1-220ENST00000544550 NOL9Q5SY16 702 aaKnown RBP5.19□□□□□ -1.58
SNHG1-220ENST00000544550 ATXN2LQ8WWM7 1075 aaKnown RBP5.19□□□□□ -1.58
SNHG1-220ENST00000544550 MYLIPQ8WY64 445 aa5.19□□□□□ -1.58
SNHG1-220ENST00000544550 JARID2Q92833 1246 aaPredicted RBP5.19□□□□□ -1.58
SNHG1-220ENST00000544550 TEKT1Q969V4 418 aa5.19□□□□□ -1.58
SNHG1-220ENST00000544550 PLA2G12BQ9BX93 195 aa5.19□□□□□ -1.58
SNHG1-220ENST00000544550 ARHGEF10LQ9HCE6 1279 aa5.19□□□□□ -1.58
SNHG1-220ENST00000544550 RAB6BQ9NRW1 208 aa5.19□□□□□ -1.58
SNHG1-220ENST00000544550 SERTAD1Q9UHV2 236 aa5.19□□□□□ -1.58
SNHG1-220ENST00000544550 RAPGEFL1Q9UHV5 662 aa5.19□□□□□ -1.58
SNHG1-220ENST00000544550 LAS1LQ9Y4W2 734 aaKnown RBP5.19□□□□□ -1.58
SNHG1-220ENST00000544550 RANBP2P49792 3224 aaKnown RBP5.19□□□□□ -1.58
SNHG1-220ENST00000544550 PFASO15067 1338 aa5.19□□□□□ -1.58
SNHG1-220ENST00000544550 MAST3O60307 1309 aa5.19□□□□□ -1.58
SNHG1-220ENST00000544550 OTOFQ9HC10 1997 aa5.18□□□□□ -1.58
SNHG1-220ENST00000544550 A0A0G2JLL6 359 aaPredicted RBP5.18□□□□□ -1.58
SNHG1-220ENST00000544550 A0A1W2PRU2 124 aa5.18□□□□□ -1.58
SNHG1-220ENST00000544550 A6NJY4 79 aa5.18□□□□□ -1.58
SNHG1-220ENST00000544550 COL6A1P12109 1028 aa5.18□□□□□ -1.58
SNHG1-220ENST00000544550 INPP5BP32019 993 aa5.18□□□□□ -1.58
SNHG1-220ENST00000544550 SCNN1AP37088 669 aa5.18□□□□□ -1.58
SNHG1-220ENST00000544550 TMPOP42166 694 aaKnown RBP5.18□□□□□ -1.58
SNHG1-220ENST00000544550 SMTNP53814 917 aa5.18□□□□□ -1.58
SNHG1-220ENST00000544550 CLN3Q13286 438 aa5.18□□□□□ -1.58
SNHG1-220ENST00000544550 MOGSQ13724 837 aa5.18□□□□□ -1.58
SNHG1-220ENST00000544550 FAM110CQ1W6H9 321 aa5.18□□□□□ -1.58
SNHG1-220ENST00000544550 TMCO4Q5TGY1 634 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms