RNA–Protein interactions for RNA: ENST00000544484.5

CHD4-211, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene CHD4, Length 6,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-211ENST00000544484 NEK8Q86SG6 692 aa14.19□□□□□ -0.14
CHD4-211ENST00000544484 CCDC84Q86UT8 332 aaPredicted RBP14.19□□□□□ -0.14
CHD4-211ENST00000544484 DESI2Q9BSY9 194 aa14.19□□□□□ -0.14
CHD4-211ENST00000544484 GCC2Q8IWJ2 1684 aa14.19□□□□□ -0.14
CHD4-211ENST00000544484 COBLO75128 1261 aa14.19□□□□□ -0.14
CHD4-211ENST00000544484 IL6STP40189 918 aaPredicted RBP14.19□□□□□ -0.14
CHD4-211ENST00000544484 PTGDRQ13258 359 aa14.19□□□□□ -0.14
CHD4-211ENST00000544484 PTPROQ16827 1216 aa14.19□□□□□ -0.14
CHD4-211ENST00000544484 ZMYM1Q5SVZ6 1142 aa14.19□□□□□ -0.14
CHD4-211ENST00000544484 FAM102BQ5T8I3 360 aa14.19□□□□□ -0.14
CHD4-211ENST00000544484 SPICE1Q8N0Z3 855 aa14.19□□□□□ -0.14
CHD4-211ENST00000544484 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.19□□□□□ -0.142e-9■■■■□ 22
CHD4-211ENST00000544484 MED23Q9ULK4 1368 aa14.19□□□□□ -0.14
CHD4-211ENST00000544484 ERFEQ4G0M1 354 aa14.19□□□□□ -0.14
CHD4-211ENST00000544484 PPM1EQ8WY54 764 aa14.19□□□□□ -0.14
CHD4-211ENST00000544484 SMC6Q96SB8 1091 aa14.19□□□□□ -0.14
CHD4-211ENST00000544484 KCNJ18B7U540 433 aa14.19□□□□□ -0.14
CHD4-211ENST00000544484 TMEM232C9JQI7 657 aa14.19□□□□□ -0.14
CHD4-211ENST00000544484 DAPK3O43293 454 aa14.19□□□□□ -0.14
CHD4-211ENST00000544484 KCNJ12Q14500 433 aa14.19□□□□□ -0.14
CHD4-211ENST00000544484 ARHGEF16Q5VV41 709 aa14.19□□□□□ -0.14
CHD4-211ENST00000544484 CCDC94Q9BW85 323 aaPredicted RBP14.19□□□□□ -0.14
CHD4-211ENST00000544484 LSM14BQ9BX40 385 aaKnown RBP14.19□□□□□ -0.14
CHD4-211ENST00000544484 PLEKHG1Q9ULL1 1385 aa14.19□□□□□ -0.14
CHD4-211ENST00000544484 CLRN2A0PK11 232 aa14.19□□□□□ -0.14
CHD4-211ENST00000544484 OR52Z1P0C646 297 aa14.19□□□□□ -0.14
CHD4-211ENST00000544484 FBXO11Q86XK2 927 aa14.19□□□□□ -0.14
CHD4-211ENST00000544484 ASIC3Q9UHC3 531 aa14.19□□□□□ -0.14
CHD4-211ENST00000544484 ARHGEF5Q12774 1597 aa14.18□□□□□ -0.14
CHD4-211ENST00000544484 PRKAB2O43741 272 aa14.18□□□□□ -0.14
CHD4-211ENST00000544484 FLOT1O75955 427 aa14.18□□□□□ -0.14
CHD4-211ENST00000544484 BCRP11274 1271 aa14.18□□□□□ -0.14
CHD4-211ENST00000544484 DNM2P50570 870 aa14.18□□□□□ -0.14
CHD4-211ENST00000544484 GPT2Q8TD30 523 aa14.18□□□□□ -0.14
CHD4-211ENST00000544484 IFIH1Q9BYX4 1025 aaKnown RBP14.18□□□□□ -0.14
CHD4-211ENST00000544484 SLC39A2Q9NP94 309 aa14.18□□□□□ -0.14
CHD4-211ENST00000544484 UTP11Q9Y3A2 253 aaKnown RBP14.18□□□□□ -0.14
CHD4-211ENST00000544484 CYP4A11Q02928 519 aa14.18□□□□□ -0.14
CHD4-211ENST00000544484 PPP2R5DQ14738 602 aa14.18□□□□□ -0.14
CHD4-211ENST00000544484 SLFN13Q68D06 897 aa14.18□□□□□ -0.14
CHD4-211ENST00000544484 CSRNP2Q9H175 543 aa14.18□□□□□ -0.14
CHD4-211ENST00000544484 QTRT2Q9H974 415 aaKnown RBP14.18□□□□□ -0.14
CHD4-211ENST00000544484 MYO5CQ9NQX4 1742 aa14.18□□□□□ -0.14
CHD4-211ENST00000544484 USP6P35125 1406 aa14.18□□□□□ -0.14
CHD4-211ENST00000544484 ACTN4O43707 911 aaKnown RBP14.18□□□□□ -0.14
CHD4-211ENST00000544484 CD2BP2O95400 341 aaKnown RBP14.18□□□□□ -0.14
CHD4-211ENST00000544484 VIMP08670 466 aaKnown RBP14.18□□□□□ -0.14
CHD4-211ENST00000544484 MORC3Q14149 939 aa14.18□□□□□ -0.14
CHD4-211ENST00000544484 MYOCDQ8IZQ8 938 aa14.18□□□□□ -0.14
CHD4-211ENST00000544484 METTL13Q8N6R0 699 aa14.18□□□□□ -0.14
CHD4-211ENST00000544484 GPR161Q8N6U8 529 aaKnown RBP14.18□□□□□ -0.14
CHD4-211ENST00000544484 GDAP1L1Q96MZ0 367 aa14.18□□□□□ -0.14
CHD4-211ENST00000544484 CSADQ9Y600 493 aa14.18□□□□□ -0.14
CHD4-211ENST00000544484 RASGRP4Q8TDF6 673 aa14.18□□□□□ -0.14
CHD4-211ENST00000544484 FANCLQ9NW38 375 aa14.18□□□□□ -0.14
CHD4-211ENST00000544484 ABCB4P21439 1286 aa14.18□□□□□ -0.14
CHD4-211ENST00000544484 CMA1P23946 247 aa14.18□□□□□ -0.14
CHD4-211ENST00000544484 CDAN1Q8IWY9 1227 aa14.18□□□□□ -0.14
CHD4-211ENST00000544484 GPATCH11Q8N954 259 aa14.18□□□□□ -0.14
CHD4-211ENST00000544484 FBXO18Q8NFZ0 1043 aa14.18□□□□□ -0.14
CHD4-211ENST00000544484 TNFAIP1Q13829 316 aa14.17□□□□□ -0.14
CHD4-211ENST00000544484 PEX26Q7Z412 305 aa14.17□□□□□ -0.14
CHD4-211ENST00000544484 SAMD15Q9P1V8 674 aa14.17□□□□□ -0.14
CHD4-211ENST00000544484 DDX25Q9UHL0 483 aaKnown RBP14.17□□□□□ -0.14
CHD4-211ENST00000544484 PSMC4P43686 418 aa14.17□□□□□ -0.14
CHD4-211ENST00000544484 KRBA2Q6ZNG9 492 aa14.17□□□□□ -0.14
CHD4-211ENST00000544484 RAB3IL1Q8TBN0 382 aa14.17□□□□□ -0.14
CHD4-211ENST00000544484 NKIRAS1Q9NYS0 192 aa14.17□□□□□ -0.14
CHD4-211ENST00000544484 NLRP1Q9C000 1473 aa14.17□□□□□ -0.14
CHD4-211ENST00000544484 ERBB3P21860 1342 aa14.17□□□□□ -0.14
CHD4-211ENST00000544484 SYMPKQ92797 1274 aaKnown RBP14.17□□□□□ -0.14
CHD4-211ENST00000544484 HGSO14964 777 aaPredicted RBP14.17□□□□□ -0.14
CHD4-211ENST00000544484 RPS6KA1Q15418 735 aa14.17□□□□□ -0.14
CHD4-211ENST00000544484 CCDC14Q49A88 953 aa14.17□□□□□ -0.14
CHD4-211ENST00000544484 MLXIPQ9HAP2 919 aa14.17□□□□□ -0.14
CHD4-211ENST00000544484 PCDHA1Q9Y5I3 950 aa14.17□□□□□ -0.14
CHD4-211ENST00000544484 KDM3AQ9Y4C1 1321 aa14.17□□□□□ -0.14
CHD4-211ENST00000544484 CIAO1O76071 339 aa14.17□□□□□ -0.14
CHD4-211ENST00000544484 POLR2MP0CAP2 368 aa14.17□□□□□ -0.14
CHD4-211ENST00000544484 XRCC5P13010 732 aaKnown RBP14.17□□□□□ -0.14
CHD4-211ENST00000544484 POLA2Q14181 598 aa14.17□□□□□ -0.14
CHD4-211ENST00000544484 DEPTORQ8TB45 409 aa14.17□□□□□ -0.14
CHD4-211ENST00000544484 U2AF1L4Q8WU68 220 aaKnown RBP14.17□□□□□ -0.14
CHD4-211ENST00000544484 RGS12O14924 1447 aa14.16□□□□□ -0.14
CHD4-211ENST00000544484 SF3A3Q12874 501 aaKnown RBP eCLIP14.16□□□□□ -0.144e-6■■■■□ 22.2
CHD4-211ENST00000544484 DBNDD1Q9H9R9 158 aa14.16□□□□□ -0.14
CHD4-211ENST00000544484 UBXN2AP68543 259 aa14.16□□□□□ -0.14
CHD4-211ENST00000544484 XKR9Q5GH70 373 aa14.16□□□□□ -0.14
CHD4-211ENST00000544484 APOA5Q6Q788 366 aa14.16□□□□□ -0.14
CHD4-211ENST00000544484 OGFRQ9NZT2 677 aa14.16□□□□□ -0.14
CHD4-211ENST00000544484 WDR17Q8IZU2 1322 aa14.16□□□□□ -0.14
CHD4-211ENST00000544484 KIAA1524Q8TCG1 905 aa14.16□□□□□ -0.14
CHD4-211ENST00000544484 XDHP47989 1333 aa14.16□□□□□ -0.14
CHD4-211ENST00000544484 NLGN1Q8N2Q7 840 aa14.16□□□□□ -0.14
CHD4-211ENST00000544484 TRIM7Q9C029 511 aa14.16□□□□□ -0.14
CHD4-211ENST00000544484 PUS7LQ9H0K6 701 aaKnown RBP14.16□□□□□ -0.14
CHD4-211ENST00000544484 ST7Q9NRC1 585 aa14.16□□□□□ -0.14
CHD4-211ENST00000544484 PANK4Q9NVE7 773 aa14.16□□□□□ -0.14
CHD4-211ENST00000544484 DDAH1O94760 285 aa14.16□□□□□ -0.14
CHD4-211ENST00000544484 SERPINB2P05120 415 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms