RNA–Protein interactions for RNA: ENST00000544432.5

VAMP1-208, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 3

Gene VAMP1, Length 759 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-208ENST00000544432 MAP2K5Q13163 448 aa16.53■□□□□ 0.24
VAMP1-208ENST00000544432 MAP3K21Q5TCX8 1036 aa16.53■□□□□ 0.24
VAMP1-208ENST00000544432 U2AF1L4Q8WU68 220 aaKnown RBP16.53■□□□□ 0.24
VAMP1-208ENST00000544432 TRIB2Q92519 343 aa16.53■□□□□ 0.24
VAMP1-208ENST00000544432 SHISA4Q96DD7 197 aa16.53■□□□□ 0.24
VAMP1-208ENST00000544432 ATG4CQ96DT6 458 aa16.53■□□□□ 0.24
VAMP1-208ENST00000544432 APBA2Q99767 749 aa16.53■□□□□ 0.24
VAMP1-208ENST00000544432 MOV10L1Q9BXT6 1211 aaKnown RBP16.53■□□□□ 0.24
VAMP1-208ENST00000544432 CWC22Q9HCG8 908 aaKnown RBP16.53■□□□□ 0.24
VAMP1-208ENST00000544432 PPP1R9AQ9ULJ8 1098 aa16.53■□□□□ 0.24
VAMP1-208ENST00000544432 IVNS1ABPQ9Y6Y0 642 aa16.53■□□□□ 0.24
VAMP1-208ENST00000544432 PLXNB2O15031 1838 aa16.53■□□□□ 0.24
VAMP1-208ENST00000544432 RPTORQ8N122 1335 aa16.52■□□□□ 0.24
VAMP1-208ENST00000544432 ORC4O43929 436 aa16.52■□□□□ 0.24
VAMP1-208ENST00000544432 NDUFB10O96000 172 aa16.52■□□□□ 0.24
VAMP1-208ENST00000544432 GRB14Q14449 540 aa16.52■□□□□ 0.24
VAMP1-208ENST00000544432 ZNF589Q86UQ0 364 aaPredicted RBP16.52■□□□□ 0.24
VAMP1-208ENST00000544432 GMCL1P1Q8NEA9 526 aa16.52■□□□□ 0.24
VAMP1-208ENST00000544432 CRISPLD2Q9H0B8 497 aa16.52■□□□□ 0.24
VAMP1-208ENST00000544432 MROH8Q9H579 483 aa16.52■□□□□ 0.24
VAMP1-208ENST00000544432 SLC25A27O95847 323 aa16.51■□□□□ 0.23
VAMP1-208ENST00000544432 ZKSCAN1P17029 563 aaPredicted RBP16.51■□□□□ 0.23
VAMP1-208ENST00000544432 PDE4AP27815 886 aa16.51■□□□□ 0.23
VAMP1-208ENST00000544432 NOVP48745 357 aa16.51■□□□□ 0.23
VAMP1-208ENST00000544432 CTDSPL2Q05D32 466 aa16.51■□□□□ 0.23
VAMP1-208ENST00000544432 TMEM132BQ14DG7 1078 aa16.51■□□□□ 0.23
VAMP1-208ENST00000544432 FAM47AQ5JRC9 791 aa16.51■□□□□ 0.23
VAMP1-208ENST00000544432 FAM83BQ5T0W9 1011 aa16.51■□□□□ 0.23
VAMP1-208ENST00000544432 PRPF38BQ5VTL8 546 aaKnown RBP16.51■□□□□ 0.23
VAMP1-208ENST00000544432 UBE2Q1Q7Z7E8 422 aa16.51■□□□□ 0.23
VAMP1-208ENST00000544432 ABRAQ8N0Z2 381 aa16.51■□□□□ 0.23
VAMP1-208ENST00000544432 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.51■□□□□ 0.23
VAMP1-208ENST00000544432 HMX1Q9NP08 348 aaPredicted RBP16.51■□□□□ 0.23
VAMP1-208ENST00000544432 VWA5AO00534 786 aa16.5■□□□□ 0.23
VAMP1-208ENST00000544432 PCP11498 1178 aaKnown RBP16.5■□□□□ 0.23
VAMP1-208ENST00000544432 ERCC3P19447 782 aa16.5■□□□□ 0.23
VAMP1-208ENST00000544432 WDR78Q5VTH9 848 aa16.5■□□□□ 0.23
VAMP1-208ENST00000544432 REPS2Q8NFH8 660 aa16.5■□□□□ 0.23
VAMP1-208ENST00000544432 DEFB118Q96PH6 123 aa16.5■□□□□ 0.23
VAMP1-208ENST00000544432 DIAPH3Q9NSV4 1193 aa16.5■□□□□ 0.23
VAMP1-208ENST00000544432 FBXO28Q9NVF7 368 aa16.5■□□□□ 0.23
VAMP1-208ENST00000544432 TACC3Q9Y6A5 838 aa16.5■□□□□ 0.23
VAMP1-208ENST00000544432 A0A0G2JMZ2 1700 aa16.5■□□□□ 0.23
VAMP1-208ENST00000544432 TSPY2A6NKD2 308 aa16.49■□□□□ 0.23
VAMP1-208ENST00000544432 RAD21O60216 631 aa16.49■□□□□ 0.23
VAMP1-208ENST00000544432 IGHA2P01877 340 aa16.49■□□□□ 0.23
VAMP1-208ENST00000544432 COPB2P35606 906 aa16.49■□□□□ 0.23
VAMP1-208ENST00000544432 NT5C2P49902 561 aa16.49■□□□□ 0.23
VAMP1-208ENST00000544432 TRIM32Q13049 653 aa16.49■□□□□ 0.23
VAMP1-208ENST00000544432 RIOX2Q8IUF8 465 aa16.49■□□□□ 0.23
VAMP1-208ENST00000544432 PRPF38AQ8NAV1 312 aaKnown RBP16.49■□□□□ 0.23
VAMP1-208ENST00000544432 SLF1Q9BQI6 1058 aa16.49■□□□□ 0.23
VAMP1-208ENST00000544432 INCENPQ9NQS7 918 aa16.49■□□□□ 0.23
VAMP1-208ENST00000544432 RANBP6O60518 1105 aaKnown RBP16.48■□□□□ 0.23
VAMP1-208ENST00000544432 TFRCP02786 760 aaKnown RBP16.48■□□□□ 0.23
VAMP1-208ENST00000544432 PRKAR2AP13861 404 aaKnown RBP16.48■□□□□ 0.23
VAMP1-208ENST00000544432 STAT3P40763 770 aa16.48■□□□□ 0.23
VAMP1-208ENST00000544432 CACNB2Q08289 660 aaPredicted RBP16.48■□□□□ 0.23
VAMP1-208ENST00000544432 PLS1Q14651 629 aa16.48■□□□□ 0.23
VAMP1-208ENST00000544432 CCL14Q16627 93 aa16.48■□□□□ 0.23
VAMP1-208ENST00000544432 TTC22Q5TAA0 569 aa16.48■□□□□ 0.23
VAMP1-208ENST00000544432 SLFN13Q68D06 897 aa16.48■□□□□ 0.23
VAMP1-208ENST00000544432 CWC27Q6UX04 472 aaKnown RBP16.48■□□□□ 0.23
VAMP1-208ENST00000544432 GMCL1Q96IK5 515 aa16.48■□□□□ 0.23
VAMP1-208ENST00000544432 NUP88Q99567 741 aaPredicted RBP16.48■□□□□ 0.23
VAMP1-208ENST00000544432 IL17RBQ9NRM6 502 aa16.48■□□□□ 0.23
VAMP1-208ENST00000544432 TCP11L1Q9NUJ3 509 aa16.48■□□□□ 0.23
VAMP1-208ENST00000544432 SLC5A4Q9NY91 659 aa16.48■□□□□ 0.23
VAMP1-208ENST00000544432 FEM1BQ9UK73 627 aa16.48■□□□□ 0.23
VAMP1-208ENST00000544432 ZNF214Q9UL59 606 aaPredicted RBP16.48■□□□□ 0.23
VAMP1-208ENST00000544432 ATP2A1O14983 1001 aa16.47■□□□□ 0.23
VAMP1-208ENST00000544432 PLA2G6O60733 806 aa16.47■□□□□ 0.23
VAMP1-208ENST00000544432 FDX1P10109 184 aa16.47■□□□□ 0.23
VAMP1-208ENST00000544432 BMP3P12645 472 aa16.47■□□□□ 0.23
VAMP1-208ENST00000544432 ADORA2AP29274 412 aa16.47■□□□□ 0.23
VAMP1-208ENST00000544432 MFSD14CQ5VZR4 134 aa16.47■□□□□ 0.23
VAMP1-208ENST00000544432 OLFML2BQ68BL8 750 aa16.47■□□□□ 0.23
VAMP1-208ENST00000544432 NCAPG2Q86XI2 1143 aa16.47■□□□□ 0.23
VAMP1-208ENST00000544432 ANKLE1Q8NAG6 615 aa16.47■□□□□ 0.23
VAMP1-208ENST00000544432 DSCC1Q9BVC3 393 aa16.47■□□□□ 0.23
VAMP1-208ENST00000544432 FARP2O94887 1054 aaPredicted RBP16.46■□□□□ 0.23
VAMP1-208ENST00000544432 FCER1AP12319 257 aa16.46■□□□□ 0.23
VAMP1-208ENST00000544432 GSPT1P15170 499 aaKnown RBP16.46■□□□□ 0.23
VAMP1-208ENST00000544432 AKNAD1Q5T1N1 836 aa16.46■□□□□ 0.23
VAMP1-208ENST00000544432 SAMD1Q6SPF0 538 aaPredicted RBP16.46■□□□□ 0.23
VAMP1-208ENST00000544432 DPP9Q86TI2 863 aa16.46■□□□□ 0.23
VAMP1-208ENST00000544432 LRRC47Q8N1G4 583 aaKnown RBP16.46■□□□□ 0.23
VAMP1-208ENST00000544432 NPLOC4Q8TAT6 608 aa16.46■□□□□ 0.23
VAMP1-208ENST00000544432 STAG1Q8WVM7 1258 aa16.46■□□□□ 0.23
VAMP1-208ENST00000544432 RNF41Q9H4P4 317 aaPredicted RBP16.46■□□□□ 0.23
VAMP1-208ENST00000544432 FLRT1Q9NZU1 646 aa16.46■□□□□ 0.23
VAMP1-208ENST00000544432 OGDHLQ9ULD0 1010 aa16.46■□□□□ 0.23
VAMP1-208ENST00000544432 PARP14Q460N5 1801 aa16.46■□□□□ 0.23
VAMP1-208ENST00000544432 ZNF236Q9UL36 1845 aa16.45■□□□□ 0.22
VAMP1-208ENST00000544432 COBLO75128 1261 aa16.45■□□□□ 0.22
VAMP1-208ENST00000544432 ZBED4O75132 1171 aa16.45■□□□□ 0.22
VAMP1-208ENST00000544432 MFSD6Q6ZSS7 791 aa16.45■□□□□ 0.22
VAMP1-208ENST00000544432 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.45■□□□□ 0.22
VAMP1-208ENST00000544432 FAM160B2Q86V87 743 aa16.45■□□□□ 0.22
VAMP1-208ENST00000544432 CHURC1Q8WUH1 139 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms