RNA–Protein interactions for RNA: ENST00000544246.5

PCDH9-204, Transcript of protocadherin 9, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCDH9, Length 6,234 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-204ENST00000544246 ZNF335Q9H4Z2 1342 aaPredicted RBP11.42□□□□□ -0.58
PCDH9-204ENST00000544246 ANXA1P04083 346 aa11.42□□□□□ -0.58
PCDH9-204ENST00000544246 LMNB1P20700 586 aa11.42□□□□□ -0.58
PCDH9-204ENST00000544246 ZNF75DP51815 510 aa11.42□□□□□ -0.58
PCDH9-204ENST00000544246 ESRRGP62508 458 aa11.42□□□□□ -0.58
PCDH9-204ENST00000544246 SCYL2Q6P3W7 929 aa11.42□□□□□ -0.58
PCDH9-204ENST00000544246 COPS6Q7L5N1 327 aa11.42□□□□□ -0.58
PCDH9-204ENST00000544246 CCDC138Q96M89 665 aa11.42□□□□□ -0.58
PCDH9-204ENST00000544246 MEIS3Q99687 375 aa11.42□□□□□ -0.58
PCDH9-204ENST00000544246 TBC1D7Q9P0N9 293 aa11.42□□□□□ -0.58
PCDH9-204ENST00000544246 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.42□□□□□ -0.58
PCDH9-204ENST00000544246 ZBED4O75132 1171 aa11.42□□□□□ -0.58
PCDH9-204ENST00000544246 GPC4O75487 556 aa11.42□□□□□ -0.58
PCDH9-204ENST00000544246 ADCY7P51828 1080 aa11.42□□□□□ -0.58
PCDH9-204ENST00000544246 ARHGAP44Q17R89 818 aa11.42□□□□□ -0.58
PCDH9-204ENST00000544246 KSR2Q6VAB6 950 aa11.42□□□□□ -0.58
PCDH9-204ENST00000544246 U2AF1L4Q8WU68 220 aaKnown RBP11.42□□□□□ -0.58
PCDH9-204ENST00000544246 ADGRF5Q8IZF2 1346 aa11.42□□□□□ -0.58
PCDH9-204ENST00000544246 SAT1P21673 171 aa11.42□□□□□ -0.58
PCDH9-204ENST00000544246 TTC38Q5R3I4 469 aa11.42□□□□□ -0.58
PCDH9-204ENST00000544246 LRRC8CQ8TDW0 803 aa11.42□□□□□ -0.58
PCDH9-204ENST00000544246 IFIH1Q9BYX4 1025 aaKnown RBP11.42□□□□□ -0.58
PCDH9-204ENST00000544246 ANAPC5Q9UJX4 755 aa11.42□□□□□ -0.58
PCDH9-204ENST00000544246 THAP12O43422 761 aa11.41□□□□□ -0.58
PCDH9-204ENST00000544246 PEX19P40855 299 aa11.41□□□□□ -0.58
PCDH9-204ENST00000544246 HERC4Q5GLZ8 1057 aaPredicted RBP11.41□□□□□ -0.58
PCDH9-204ENST00000544246 TYW1BQ6NUM6 668 aa11.41□□□□□ -0.58
PCDH9-204ENST00000544246 TEX11Q8IYF3 940 aa11.41□□□□□ -0.58
PCDH9-204ENST00000544246 ANKRD44Q8N8A2 993 aa11.41□□□□□ -0.58
PCDH9-204ENST00000544246 SLF1Q9BQI6 1058 aa11.41□□□□□ -0.58
PCDH9-204ENST00000544246 LSM14BQ9BX40 385 aaKnown RBP11.41□□□□□ -0.58
PCDH9-204ENST00000544246 KCNG1Q9UIX4 513 aa11.41□□□□□ -0.58
PCDH9-204ENST00000544246 BZW2Q9Y6E2 419 aaKnown RBP11.41□□□□□ -0.58
PCDH9-204ENST00000544246 CAPN9O14815 690 aa11.41□□□□□ -0.58
PCDH9-204ENST00000544246 POLR2DO15514 142 aaKnown RBP11.41□□□□□ -0.58
PCDH9-204ENST00000544246 PDE6AP16499 860 aa11.41□□□□□ -0.58
PCDH9-204ENST00000544246 TNNI1P19237 187 aa11.41□□□□□ -0.58
PCDH9-204ENST00000544246 HP1BP3Q5SSJ5 553 aaPredicted RBP11.41□□□□□ -0.58
PCDH9-204ENST00000544246 TPTE2Q6XPS3 522 aa11.41□□□□□ -0.58
PCDH9-204ENST00000544246 CDKL2Q92772 493 aa11.41□□□□□ -0.58
PCDH9-204ENST00000544246 TEKT2Q9UIF3 430 aa11.41□□□□□ -0.58
PCDH9-204ENST00000544246 FAM83GA6ND36 823 aa11.41□□□□□ -0.58
PCDH9-204ENST00000544246 PPP2R5EQ16537 467 aa11.41□□□□□ -0.58
PCDH9-204ENST00000544246 BBOF1Q8ND07 529 aa11.41□□□□□ -0.58
PCDH9-204ENST00000544246 ATP6V0A1Q93050 837 aa11.41□□□□□ -0.58
PCDH9-204ENST00000544246 KRT82Q9NSB4 513 aa11.41□□□□□ -0.58
PCDH9-204ENST00000544246 LRWD1Q9UFC0 647 aa11.41□□□□□ -0.58
PCDH9-204ENST00000544246 EVI5O60447 810 aa11.41□□□□□ -0.58
PCDH9-204ENST00000544246 NR1I2O75469 434 aa11.41□□□□□ -0.58
PCDH9-204ENST00000544246 MBD4O95243 580 aa11.41□□□□□ -0.58
PCDH9-204ENST00000544246 ABTB1Q969K4 478 aaPredicted RBP11.41□□□□□ -0.58
PCDH9-204ENST00000544246 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.41□□□□□ -0.58
PCDH9-204ENST00000544246 KRIT1O00522 736 aa11.41□□□□□ -0.58
PCDH9-204ENST00000544246 HSPA8P11142 646 aaKnown RBP11.41□□□□□ -0.58
PCDH9-204ENST00000544246 ATF7P17544 494 aaPredicted RBP11.41□□□□□ -0.58
PCDH9-204ENST00000544246 TFCP2Q12800 502 aa11.41□□□□□ -0.58
PCDH9-204ENST00000544246 BRD3Q15059 726 aa11.41□□□□□ -0.58
PCDH9-204ENST00000544246 KRT25Q7Z3Z0 450 aa11.41□□□□□ -0.58
PCDH9-204ENST00000544246 DZIP3Q86Y13 1208 aaKnown RBP11.41□□□□□ -0.58
PCDH9-204ENST00000544246 ZCRB1Q8TBF4 217 aaKnown RBP11.41□□□□□ -0.58
PCDH9-204ENST00000544246 CAPS2Q9BXY5 557 aa11.41□□□□□ -0.58
PCDH9-204ENST00000544246 SUFUQ9UMX1 484 aa11.41□□□□□ -0.58
PCDH9-204ENST00000544246 EEF1DP29692 281 aaKnown RBP11.4□□□□□ -0.58
PCDH9-204ENST00000544246 RAP1GDS1P52306 607 aa11.4□□□□□ -0.58
PCDH9-204ENST00000544246 RINT1Q6NUQ1 792 aa11.4□□□□□ -0.58
PCDH9-204ENST00000544246 DYMQ7RTS9 669 aa11.4□□□□□ -0.58
PCDH9-204ENST00000544246 NELFCDQ8IXH7 590 aa11.4□□□□□ -0.58
PCDH9-204ENST00000544246 ACSBG1Q96GR2 724 aa11.4□□□□□ -0.58
PCDH9-204ENST00000544246 TMEM87BQ96K49 555 aa11.4□□□□□ -0.58
PCDH9-204ENST00000544246 ST7Q9NRC1 585 aa11.4□□□□□ -0.58
PCDH9-204ENST00000544246 MYO5CQ9NQX4 1742 aa11.4□□□□□ -0.58
PCDH9-204ENST00000544246 NVLO15381 856 aaKnown RBP11.4□□□□□ -0.58
PCDH9-204ENST00000544246 IFNB1P01574 187 aa11.4□□□□□ -0.58
PCDH9-204ENST00000544246 ATF2P15336 505 aa11.4□□□□□ -0.58
PCDH9-204ENST00000544246 ATICP31939 592 aa11.4□□□□□ -0.58
PCDH9-204ENST00000544246 ZSCAN26Q16670 478 aa11.4□□□□□ -0.58
PCDH9-204ENST00000544246 CABLES1Q8TDN4 633 aa11.4□□□□□ -0.58
PCDH9-204ENST00000544246 PLEKHA4Q9H4M7 779 aa11.4□□□□□ -0.58
PCDH9-204ENST00000544246 SPATS2LQ9NUQ6 558 aaKnown RBP11.4□□□□□ -0.58
PCDH9-204ENST00000544246 NSFL1CQ9UNZ2 370 aaKnown RBP11.4□□□□□ -0.58
PCDH9-204ENST00000544246 LRMPQ12912 555 aa11.4□□□□□ -0.58
PCDH9-204ENST00000544246 DDB1Q16531 1140 aa11.4□□□□□ -0.58
PCDH9-204ENST00000544246 CALCRLQ16602 461 aa11.4□□□□□ -0.58
PCDH9-204ENST00000544246 RRAGAQ7L523 313 aa11.4□□□□□ -0.58
PCDH9-204ENST00000544246 SMC5Q8IY18 1101 aa11.4□□□□□ -0.58
PCDH9-204ENST00000544246 IFT122Q9HBG6 1241 aa11.4□□□□□ -0.58
PCDH9-204ENST00000544246 ANLNQ9NQW6 1124 aa11.4□□□□□ -0.58
PCDH9-204ENST00000544246 CLASP1Q7Z460 1538 aa11.4□□□□□ -0.58
PCDH9-204ENST00000544246 NPHP4O75161 1426 aaPredicted RBP11.4□□□□□ -0.58
PCDH9-204ENST00000544246 RLBP1P12271 317 aa11.4□□□□□ -0.58
PCDH9-204ENST00000544246 SAR1BQ9Y6B6 198 aa11.4□□□□□ -0.58
PCDH9-204ENST00000544246 IRS4O14654 1257 aaPredicted RBP11.4□□□□□ -0.59
PCDH9-204ENST00000544246 ABL1P00519 1130 aa11.4□□□□□ -0.59
PCDH9-204ENST00000544246 NONOQ15233 471 aaKnown RBP eCLIP11.4□□□□□ -0.59
PCDH9-204ENST00000544246 FNBP4Q8N3X1 1017 aaPredicted RBP11.4□□□□□ -0.59
PCDH9-204ENST00000544246 PA2G4Q9UQ80 394 aaKnown RBP11.4□□□□□ -0.59
PCDH9-204ENST00000544246 SCINQ9Y6U3 715 aa11.4□□□□□ -0.59
PCDH9-204ENST00000544246 SPDYE2BA6NHP3 402 aa11.39□□□□□ -0.59
PCDH9-204ENST00000544246 SPDYE6P0CI01 402 aa11.39□□□□□ -0.59
PCDH9-204ENST00000544246 RPS6KB1P23443 525 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms