RNA–Protein interactions for RNA: ENST00000544004.1

AP000439.1-201, humanhuman

TSL 4 BASIC

Gene AP000439.1, Length 581 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000439.1-201ENST00000544004 CYP7A1P22680 504 aa13.79□□□□□ -0.2
AP000439.1-201ENST00000544004 DSG3P32926 999 aa13.79□□□□□ -0.2
AP000439.1-201ENST00000544004 G3BP1Q13283 466 aaKnown RBP eCLIP13.79□□□□□ -0.2
AP000439.1-201ENST00000544004 RAB30Q15771 203 aa13.79□□□□□ -0.2
AP000439.1-201ENST00000544004 CCDC158Q5M9N0 1113 aa13.79□□□□□ -0.2
AP000439.1-201ENST00000544004 ZNF365Q70YC5 407 aa13.79□□□□□ -0.2
AP000439.1-201ENST00000544004 MIGA1Q8NAN2 632 aa13.79□□□□□ -0.2
AP000439.1-201ENST00000544004 CDCA7LQ96GN5 454 aa13.79□□□□□ -0.2
AP000439.1-201ENST00000544004 NKX2-4Q9H2Z4 354 aa13.79□□□□□ -0.2
AP000439.1-201ENST00000544004 PIH1D3Q9NQM4 214 aaKnown RBP13.79□□□□□ -0.2
AP000439.1-201ENST00000544004 PARP14Q460N5 1801 aa13.78□□□□□ -0.2
AP000439.1-201ENST00000544004 E9PSI1 815 aa13.78□□□□□ -0.2
AP000439.1-201ENST00000544004 PGK2P07205 417 aa13.78□□□□□ -0.2
AP000439.1-201ENST00000544004 ZAP70P43403 619 aa13.78□□□□□ -0.2
AP000439.1-201ENST00000544004 PLCD1P51178 756 aa13.78□□□□□ -0.2
AP000439.1-201ENST00000544004 TFF2Q03403 129 aa13.78□□□□□ -0.2
AP000439.1-201ENST00000544004 PSRC1Q6PGN9 363 aaPredicted RBP13.78□□□□□ -0.2
AP000439.1-201ENST00000544004 MICALL1Q8N3F8 863 aa13.78□□□□□ -0.2
AP000439.1-201ENST00000544004 TMEM199Q8N511 208 aa13.78□□□□□ -0.2
AP000439.1-201ENST00000544004 ATG4CQ96DT6 458 aa13.78□□□□□ -0.2
AP000439.1-201ENST00000544004 MMP19Q99542 508 aa13.78□□□□□ -0.2
AP000439.1-201ENST00000544004 DBNDD2Q9BQY9 259 aa13.78□□□□□ -0.2
AP000439.1-201ENST00000544004 API5Q9BZZ5 524 aaKnown RBP13.78□□□□□ -0.2
AP000439.1-201ENST00000544004 EPHX3Q9H6B9 360 aa13.78□□□□□ -0.2
AP000439.1-201ENST00000544004 SLC28A3Q9HAS3 691 aa13.78□□□□□ -0.2
AP000439.1-201ENST00000544004 ROBO3Q96MS0 1386 aa13.78□□□□□ -0.2
AP000439.1-201ENST00000544004 MOXD2PA6NHM9 499 aa13.77□□□□□ -0.21
AP000439.1-201ENST00000544004 APBB1O00213 710 aa13.77□□□□□ -0.21
AP000439.1-201ENST00000544004 MPHOSPH10O00566 681 aaKnown RBP13.77□□□□□ -0.21
AP000439.1-201ENST00000544004 IGSF3O75054 1194 aa13.77□□□□□ -0.21
AP000439.1-201ENST00000544004 FLOT1O75955 427 aa13.77□□□□□ -0.21
AP000439.1-201ENST00000544004 GNAI3P08754 354 aa13.77□□□□□ -0.21
AP000439.1-201ENST00000544004 KCNQ1P51787 676 aa13.77□□□□□ -0.21
AP000439.1-201ENST00000544004 KCNA10Q16322 511 aa13.77□□□□□ -0.21
AP000439.1-201ENST00000544004 KIAA1755Q5JYT7 1200 aa13.77□□□□□ -0.21
AP000439.1-201ENST00000544004 MROH7Q68CQ1 1323 aa13.77□□□□□ -0.21
AP000439.1-201ENST00000544004 SAMD1Q6SPF0 538 aaPredicted RBP13.77□□□□□ -0.21
AP000439.1-201ENST00000544004 KLHDC9Q8NEP7 349 aa13.77□□□□□ -0.21
AP000439.1-201ENST00000544004 PPP1R12CQ9BZL4 782 aa13.77□□□□□ -0.21
AP000439.1-201ENST00000544004 SYNRGQ9UMZ2 1314 aa13.77□□□□□ -0.21
AP000439.1-201ENST00000544004 DIS3Q9Y2L1 958 aaKnown RBP13.77□□□□□ -0.21
AP000439.1-201ENST00000544004 IDH1O75874 414 aaKnown RBP13.76□□□□□ -0.21
AP000439.1-201ENST00000544004 SLC25A27O95847 323 aa13.76□□□□□ -0.21
AP000439.1-201ENST00000544004 CDK7P50613 346 aa13.76□□□□□ -0.21
AP000439.1-201ENST00000544004 TMEM132BQ14DG7 1078 aa13.76□□□□□ -0.21
AP000439.1-201ENST00000544004 AAK1Q2M2I8 961 aa13.76□□□□□ -0.21
AP000439.1-201ENST00000544004 ZNF792Q3KQV3 632 aa13.76□□□□□ -0.21
AP000439.1-201ENST00000544004 CERS3Q8IU89 383 aa13.76□□□□□ -0.21
AP000439.1-201ENST00000544004 GLT1D1Q96MS3 346 aa13.76□□□□□ -0.21
AP000439.1-201ENST00000544004 YBX2Q9Y2T7 364 aaKnown RBP13.76□□□□□ -0.21
AP000439.1-201ENST00000544004 CHD7Q9P2D1 2997 aa13.76□□□□□ -0.21
AP000439.1-201ENST00000544004 NAV1Q8NEY1 1877 aa13.76□□□□□ -0.21
AP000439.1-201ENST00000544004 ELP1O95163 1332 aa13.75□□□□□ -0.21
AP000439.1-201ENST00000544004 PNMA6EA0A0J9YXQ4 647 aa13.75□□□□□ -0.21
AP000439.1-201ENST00000544004 MYADML2A6NDP7 307 aa13.75□□□□□ -0.21
AP000439.1-201ENST00000544004 POLR3DP05423 398 aaPredicted RBP13.75□□□□□ -0.21
AP000439.1-201ENST00000544004 SLFN5Q08AF3 891 aa13.75□□□□□ -0.21
AP000439.1-201ENST00000544004 KCTD2Q14681 263 aa13.75□□□□□ -0.21
AP000439.1-201ENST00000544004 TNNI3KQ59H18 835 aa13.75□□□□□ -0.21
AP000439.1-201ENST00000544004 CCSAPQ6IQ19 270 aaPredicted RBP13.75□□□□□ -0.21
AP000439.1-201ENST00000544004 SPICE1Q8N0Z3 855 aa13.75□□□□□ -0.21
AP000439.1-201ENST00000544004 MAGEB6Q8N7X4 407 aa13.75□□□□□ -0.21
AP000439.1-201ENST00000544004 HERVK_113Q902F9 699 aa13.75□□□□□ -0.21
AP000439.1-201ENST00000544004 VTI1AQ96AJ9 217 aa13.75□□□□□ -0.21
AP000439.1-201ENST00000544004 IL23AQ9NPF7 189 aa13.75□□□□□ -0.21
AP000439.1-201ENST00000544004 CNPY2Q9Y2B0 182 aa13.75□□□□□ -0.21
AP000439.1-201ENST00000544004 FPGT-TNNI3KV9GXZ4 949 aa13.75□□□□□ -0.21
AP000439.1-201ENST00000544004 MYH8P13535 1937 aa13.74□□□□□ -0.21
AP000439.1-201ENST00000544004 IRX5P78411 483 aaPredicted RBP13.74□□□□□ -0.21
AP000439.1-201ENST00000544004 EVX2Q03828 476 aa13.74□□□□□ -0.21
AP000439.1-201ENST00000544004 GABPAQ06546 454 aa13.74□□□□□ -0.21
AP000439.1-201ENST00000544004 SKIV2LQ15477 1246 aaKnown RBP13.74□□□□□ -0.21
AP000439.1-201ENST00000544004 TMEM31Q5JXX7 168 aa13.74□□□□□ -0.21
AP000439.1-201ENST00000544004 RIOX2Q8IUF8 465 aa13.74□□□□□ -0.21
AP000439.1-201ENST00000544004 ZNF512BQ96KM6 892 aaPredicted RBP13.74□□□□□ -0.21
AP000439.1-201ENST00000544004 MTIF3Q9H2K0 278 aaKnown RBP13.74□□□□□ -0.21
AP000439.1-201ENST00000544004 GPR108Q9NPR9 543 aa13.74□□□□□ -0.21
AP000439.1-201ENST00000544004 FAM184BQ9ULE4 1060 aa13.74□□□□□ -0.21
AP000439.1-201ENST00000544004 ARVCFO00192 962 aa13.73□□□□□ -0.21
AP000439.1-201ENST00000544004 ANP32CO43423 234 aa13.73□□□□□ -0.21
AP000439.1-201ENST00000544004 FGBP02675 491 aa13.73□□□□□ -0.21
AP000439.1-201ENST00000544004 ASGR1P07306 291 aa13.73□□□□□ -0.21
AP000439.1-201ENST00000544004 C6orf222P0C671 652 aaPredicted RBP13.73□□□□□ -0.21
AP000439.1-201ENST00000544004 CYP2C18P33260 490 aa13.73□□□□□ -0.21
AP000439.1-201ENST00000544004 RABGGTBP53611 331 aa13.73□□□□□ -0.21
AP000439.1-201ENST00000544004 PPP2R2DQ66LE6 453 aa13.73□□□□□ -0.21
AP000439.1-201ENST00000544004 FAM126BQ8IXS8 530 aa13.73□□□□□ -0.21
AP000439.1-201ENST00000544004 PCSK9Q8NBP7 692 aaKnown RBP13.73□□□□□ -0.21
AP000439.1-201ENST00000544004 A0A0U1RQG5 324 aaPredicted RBP13.72□□□□□ -0.21
AP000439.1-201ENST00000544004 ERC2O15083 957 aa13.72□□□□□ -0.21
AP000439.1-201ENST00000544004 WDR46O15213 610 aaKnown RBP13.72□□□□□ -0.21
AP000439.1-201ENST00000544004 TLR3O15455 904 aaKnown RBP13.72□□□□□ -0.21
AP000439.1-201ENST00000544004 DUSP11O75319 330 aaKnown RBP13.72□□□□□ -0.21
AP000439.1-201ENST00000544004 SNAI1O95863 264 aaPredicted RBP13.72□□□□□ -0.21
AP000439.1-201ENST00000544004 GNAI2P04899 355 aa13.72□□□□□ -0.21
AP000439.1-201ENST00000544004 TMEM179Q6ZVK1 233 aa13.72□□□□□ -0.21
AP000439.1-201ENST00000544004 OTOP2Q7RTS6 562 aa13.72□□□□□ -0.21
AP000439.1-201ENST00000544004 CLEC10AQ8IUN9 316 aa13.72□□□□□ -0.21
AP000439.1-201ENST00000544004 SIAH1Q8IUQ4 282 aa13.72□□□□□ -0.21
AP000439.1-201ENST00000544004 VCPKMTQ9H867 229 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms