RNA–Protein interactions for RNA: ENST00000543928.5

SP140-213, Transcript of SP140 nuclear body protein, humanhuman

TSL 2

Gene SP140, Length 640 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-213ENST00000543928 TANGO6Q9C0B7 1094 aa15.98■□□□□ 0.15
SP140-213ENST00000543928 UPF2Q9HAU5 1272 aaKnown RBP15.98■□□□□ 0.15
SP140-213ENST00000543928 LY9Q9HBG7 655 aa15.98■□□□□ 0.15
SP140-213ENST00000543928 ZSWIM6Q9HCJ5 1215 aa15.98■□□□□ 0.15
SP140-213ENST00000543928 PNMA3Q9UL41 463 aa15.98■□□□□ 0.15
SP140-213ENST00000543928 PCNTO95613 3336 aa15.97■□□□□ 0.15
SP140-213ENST00000543928 CA12O43570 354 aa15.97■□□□□ 0.15
SP140-213ENST00000543928 RPS6KB1P23443 525 aa15.97■□□□□ 0.15
SP140-213ENST00000543928 SLC1A4P43007 532 aa15.97■□□□□ 0.15
SP140-213ENST00000543928 IRX3P78415 501 aaPredicted RBP15.97■□□□□ 0.15
SP140-213ENST00000543928 C1QBPQ07021 282 aaKnown RBP15.97■□□□□ 0.15
SP140-213ENST00000543928 CRHR2Q13324 411 aa15.97■□□□□ 0.15
SP140-213ENST00000543928 CATSPERGQ6ZRH7 1159 aa15.97■□□□□ 0.15
SP140-213ENST00000543928 RASGRP2Q7LDG7 609 aa15.97■□□□□ 0.15
SP140-213ENST00000543928 ASCC2Q9H1I8 757 aaPredicted RBP15.97■□□□□ 0.15
SP140-213ENST00000543928 SAGE1Q9NXZ1 904 aa15.97■□□□□ 0.15
SP140-213ENST00000543928 TBC1D8O95759 1140 aa15.96■□□□□ 0.15
SP140-213ENST00000543928 BMP3P12645 472 aa15.96■□□□□ 0.15
SP140-213ENST00000543928 NFXL1Q6ZNB6 911 aa15.96■□□□□ 0.15
SP140-213ENST00000543928 RUFY3Q7L099 469 aa15.96■□□□□ 0.15
SP140-213ENST00000543928 DCAF4Q8WV16 495 aa15.96■□□□□ 0.15
SP140-213ENST00000543928 IL17RAQ96F46 866 aa15.96■□□□□ 0.15
SP140-213ENST00000543928 GMCL1Q96IK5 515 aa15.96■□□□□ 0.15
SP140-213ENST00000543928 UPF3BQ9BZI7 483 aaKnown RBP15.96■□□□□ 0.15
SP140-213ENST00000543928 ZFYVE28Q9HCC9 887 aa15.96■□□□□ 0.15
SP140-213ENST00000543928 ISY1Q9ULR0 285 aaKnown RBP15.96■□□□□ 0.15
SP140-213ENST00000543928 CYP46A1Q9Y6A2 500 aa15.96■□□□□ 0.15
SP140-213ENST00000543928 FLOT1O75955 427 aa15.95■□□□□ 0.14
SP140-213ENST00000543928 ATXN8OSP0DMR3 200 aa15.95■□□□□ 0.14
SP140-213ENST00000543928 PDHBP11177 359 aa15.95■□□□□ 0.14
SP140-213ENST00000543928 LIFRP42702 1097 aa15.95■□□□□ 0.14
SP140-213ENST00000543928 RBM25P49756 843 aaKnown RBP15.95■□□□□ 0.14
SP140-213ENST00000543928 FGD1P98174 961 aa15.95■□□□□ 0.14
SP140-213ENST00000543928 CCDC96Q2M329 555 aa15.95■□□□□ 0.14
SP140-213ENST00000543928 Q6ZUG5 572 aa15.95■□□□□ 0.14
SP140-213ENST00000543928 KCTD1Q719H9 257 aa15.95■□□□□ 0.14
SP140-213ENST00000543928 TMTC2Q8N394 836 aa15.95■□□□□ 0.14
SP140-213ENST00000543928 SMCR8Q8TEV9 937 aaPredicted RBP15.95■□□□□ 0.14
SP140-213ENST00000543928 P2RX7Q99572 595 aaKnown RBP15.95■□□□□ 0.14
SP140-213ENST00000543928 CFHR5Q9BXR6 569 aa15.95■□□□□ 0.14
SP140-213ENST00000543928 R3HDMLQ9H3Y0 253 aa15.95■□□□□ 0.14
SP140-213ENST00000543928 CCDC69A6NI79 296 aa15.94■□□□□ 0.14
SP140-213ENST00000543928 TMEM232C9JQI7 657 aa15.94■□□□□ 0.14
SP140-213ENST00000543928 HSPA1AP0DMV8 641 aaKnown RBP15.94■□□□□ 0.14
SP140-213ENST00000543928 HSPA1BP0DMV9 641 aaKnown RBP15.94■□□□□ 0.14
SP140-213ENST00000543928 SNHG28P0DPA3 235 aa15.94■□□□□ 0.14
SP140-213ENST00000543928 HERVK_113P62684 666 aa15.94■□□□□ 0.14
SP140-213ENST00000543928 COG2Q14746 738 aa15.94■□□□□ 0.14
SP140-213ENST00000543928 CATIPQ7Z7H3 387 aa15.94■□□□□ 0.14
SP140-213ENST00000543928 FBXO28Q9NVF7 368 aa15.94■□□□□ 0.14
SP140-213ENST00000543928 TSKSQ9UJT2 592 aa15.94■□□□□ 0.14
SP140-213ENST00000543928 FRMPD2Q68DX3 1309 aaPredicted RBP15.94■□□□□ 0.14
SP140-213ENST00000543928 ADGRA2Q96PE1 1338 aa15.94■□□□□ 0.14
SP140-213ENST00000543928 SPDYE16A6NNV3 312 aaPredicted RBP15.93■□□□□ 0.14
SP140-213ENST00000543928 TLR2O60603 784 aa15.93■□□□□ 0.14
SP140-213ENST00000543928 DSG3P32926 999 aa15.93■□□□□ 0.14
SP140-213ENST00000543928 ZNF543Q08ER8 600 aa15.93■□□□□ 0.14
SP140-213ENST00000543928 SGMS1Q86VZ5 419 aa15.93■□□□□ 0.14
SP140-213ENST00000543928 ZNF654Q8IZM8 581 aa15.93■□□□□ 0.14
SP140-213ENST00000543928 SLF1Q9BQI6 1058 aa15.93■□□□□ 0.14
SP140-213ENST00000543928 GPCPD1Q9NPB8 672 aa15.93■□□□□ 0.14
SP140-213ENST00000543928 CPA4Q9UI42 421 aa15.93■□□□□ 0.14
SP140-213ENST00000543928 FEM1BQ9UK73 627 aa15.93■□□□□ 0.14
SP140-213ENST00000543928 RLFQ13129 1914 aa15.92■□□□□ 0.14
SP140-213ENST00000543928 DDAH1O94760 285 aa15.92■□□□□ 0.14
SP140-213ENST00000543928 PARP1P09874 1014 aaKnown RBP15.92■□□□□ 0.14
SP140-213ENST00000543928 GOLGA8HP0CJ92 632 aa15.92■□□□□ 0.14
SP140-213ENST00000543928 STAT2P52630 851 aa15.92■□□□□ 0.14
SP140-213ENST00000543928 TROAPQ12815 778 aa15.92■□□□□ 0.14
SP140-213ENST00000543928 IKQ13123 557 aaPredicted RBP15.92■□□□□ 0.14
SP140-213ENST00000543928 ASPRV1Q53RT3 343 aa15.92■□□□□ 0.14
SP140-213ENST00000543928 TTBK2Q6IQ55 1244 aa15.92■□□□□ 0.14
SP140-213ENST00000543928 NUP133Q8WUM0 1156 aa15.92■□□□□ 0.14
SP140-213ENST00000543928 BRF1Q92994 677 aa15.92■□□□□ 0.14
SP140-213ENST00000543928 ATG4CQ96DT6 458 aa15.92■□□□□ 0.14
SP140-213ENST00000543928 TBC1D32Q96NH3 1257 aa15.92■□□□□ 0.14
SP140-213ENST00000543928 KIF2CQ99661 725 aa15.92■□□□□ 0.14
SP140-213ENST00000543928 MYL10Q9BUA6 226 aa15.92■□□□□ 0.14
SP140-213ENST00000543928 PDRG1Q9NUG6 133 aa15.92■□□□□ 0.14
SP140-213ENST00000543928 HOXC10Q9NYD6 342 aa15.92■□□□□ 0.14
SP140-213ENST00000543928 BRPF3Q9ULD4 1205 aa15.92■□□□□ 0.14
SP140-213ENST00000543928 PPP1R9AQ9ULJ8 1098 aa15.92■□□□□ 0.14
SP140-213ENST00000543928 SLC12A7Q9Y666 1083 aa15.92■□□□□ 0.14
SP140-213ENST00000543928 MYPNQ86TC9 1320 aa15.92■□□□□ 0.14
SP140-213ENST00000543928 PARP14Q460N5 1801 aa15.91■□□□□ 0.14
SP140-213ENST00000543928 FOXN1O15353 648 aa15.91■□□□□ 0.14
SP140-213ENST00000543928 GCLCP48506 637 aaPredicted RBP15.91■□□□□ 0.14
SP140-213ENST00000543928 GRM4Q14833 912 aa15.91■□□□□ 0.14
SP140-213ENST00000543928 GPATCH4Q5T3I0 446 aaKnown RBP15.91■□□□□ 0.14
SP140-213ENST00000543928 POTEEQ6S8J3 1075 aa15.91■□□□□ 0.14
SP140-213ENST00000543928 C17orf99Q6UX52 265 aa15.91■□□□□ 0.14
SP140-213ENST00000543928 LBX2Q6XYB7 198 aa15.91■□□□□ 0.14
SP140-213ENST00000543928 FAM160B2Q86V87 743 aa15.91■□□□□ 0.14
SP140-213ENST00000543928 RAB11FIP4Q86YS3 637 aa15.91■□□□□ 0.14
SP140-213ENST00000543928 FBXL16Q8N461 479 aa15.91■□□□□ 0.14
SP140-213ENST00000543928 PRPF38AQ8NAV1 312 aaKnown RBP15.91■□□□□ 0.14
SP140-213ENST00000543928 GTF3C2Q8WUA4 911 aaPredicted RBP15.91■□□□□ 0.14
SP140-213ENST00000543928 CHURC1Q8WUH1 139 aa15.91■□□□□ 0.14
SP140-213ENST00000543928 KIFC2Q96AC6 838 aa15.91■□□□□ 0.14
SP140-213ENST00000543928 PAGR1Q9BTK6 254 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms