RNA–Protein interactions for RNA: ENST00000543721.1

LMO3-229, Transcript of LIM domain only 3, humanhuman

TSL 2

Gene LMO3, Length 3,626 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-229ENST00000543721 APOA5Q6Q788 366 aa5.58□□□□□ -1.52
LMO3-229ENST00000543721 NFXL1Q6ZNB6 911 aa5.58□□□□□ -1.52
LMO3-229ENST00000543721 ANKRD13DQ6ZTN6 518 aa5.58□□□□□ -1.52
LMO3-229ENST00000543721 SGMS1Q86VZ5 419 aa5.58□□□□□ -1.52
LMO3-229ENST00000543721 TMTC2Q8N394 836 aa5.58□□□□□ -1.52
LMO3-229ENST00000543721 MREGQ8N565 214 aa5.58□□□□□ -1.52
LMO3-229ENST00000543721 EIF1ADQ8N9N8 165 aaKnown RBP5.58□□□□□ -1.52
LMO3-229ENST00000543721 KLHDC4Q8TBB5 520 aa5.58□□□□□ -1.52
LMO3-229ENST00000543721 RIN2Q8WYP3 895 aaPredicted RBP5.58□□□□□ -1.52
LMO3-229ENST00000543721 SGIP1Q9BQI5 828 aa5.58□□□□□ -1.52
LMO3-229ENST00000543721 ATP6V0A4Q9HBG4 840 aa5.58□□□□□ -1.52
LMO3-229ENST00000543721 CAPN11Q9UMQ6 739 aa5.58□□□□□ -1.52
LMO3-229ENST00000543721 C4AP0C0L4 1744 aa5.58□□□□□ -1.52
LMO3-229ENST00000543721 C4BP0C0L5 1744 aa5.58□□□□□ -1.52
LMO3-229ENST00000543721 PIK3C2AO00443 1686 aa5.58□□□□□ -1.52
LMO3-229ENST00000543721 SLIT3O75094 1523 aa5.58□□□□□ -1.52
LMO3-229ENST00000543721 FOXN1O15353 648 aa5.58□□□□□ -1.52
LMO3-229ENST00000543721 FGAP02671 866 aa5.58□□□□□ -1.52
LMO3-229ENST00000543721 ATP1A1P05023 1023 aaKnown RBP5.58□□□□□ -1.52
LMO3-229ENST00000543721 IDEP14735 1019 aa5.58□□□□□ -1.52
LMO3-229ENST00000543721 LSP1P33241 339 aa5.58□□□□□ -1.52
LMO3-229ENST00000543721 DNM2P50570 870 aa5.58□□□□□ -1.52
LMO3-229ENST00000543721 PAK1Q13153 545 aa5.58□□□□□ -1.52
LMO3-229ENST00000543721 NAA35Q5VZE5 725 aa5.58□□□□□ -1.52
LMO3-229ENST00000543721 RCSD1Q6JBY9 416 aa5.58□□□□□ -1.52
LMO3-229ENST00000543721 KCNH5Q8NCM2 988 aa5.58□□□□□ -1.52
LMO3-229ENST00000543721 CCHCR1Q8TD31 782 aa5.58□□□□□ -1.52
LMO3-229ENST00000543721 ZNF473Q8WTR7 871 aaKnown RBP5.58□□□□□ -1.52
LMO3-229ENST00000543721 SGSM3Q96HU1 749 aa5.58□□□□□ -1.52
LMO3-229ENST00000543721 ALS2CR12Q96Q35 445 aa5.58□□□□□ -1.52
LMO3-229ENST00000543721 JADE2Q9NQC1 790 aa5.58□□□□□ -1.52
LMO3-229ENST00000543721 STIM2Q9P246 746 aa5.58□□□□□ -1.52
LMO3-229ENST00000543721 MAGEC2Q9UBF1 373 aaPredicted RBP5.58□□□□□ -1.52
LMO3-229ENST00000543721 HYOU1Q9Y4L1 999 aa5.58□□□□□ -1.52
LMO3-229ENST00000543721 CCDC189A1A4V9 331 aa5.57□□□□□ -1.52
LMO3-229ENST00000543721 TRIM75PA6NK02 468 aa5.57□□□□□ -1.52
LMO3-229ENST00000543721 KCNJ18B7U540 433 aa5.57□□□□□ -1.52
LMO3-229ENST00000543721 PPP1R3GB7ZBB8 358 aa5.57□□□□□ -1.52
LMO3-229ENST00000543721 DEXIO95424 95 aa5.57□□□□□ -1.52
LMO3-229ENST00000543721 PPP1R2P41236 205 aa5.57□□□□□ -1.52
LMO3-229ENST00000543721 ANTXR2P58335 489 aa5.57□□□□□ -1.52
LMO3-229ENST00000543721 KCNJ12Q14500 433 aa5.57□□□□□ -1.52
LMO3-229ENST00000543721 PTGISQ16647 500 aa5.57□□□□□ -1.52
LMO3-229ENST00000543721 NBPF20Q3BBV1 942 aa5.57□□□□□ -1.52
LMO3-229ENST00000543721 TCP11X2Q5H9J9 407 aa5.57□□□□□ -1.52
LMO3-229ENST00000543721 PARP9Q8IXQ6 854 aa5.57□□□□□ -1.52
LMO3-229ENST00000543721 DIS3L2Q8IYB7 885 aaKnown RBP5.57□□□□□ -1.52
LMO3-229ENST00000543721 WHAMMQ8TF30 809 aa5.57□□□□□ -1.52
LMO3-229ENST00000543721 HOOK2Q96ED9 719 aa5.57□□□□□ -1.52
LMO3-229ENST00000543721 MED15Q96RN5 788 aa5.57□□□□□ -1.52
LMO3-229ENST00000543721 SNX12Q9UMY4 172 aa5.57□□□□□ -1.52
LMO3-229ENST00000543721 SAMM50Q9Y512 469 aa5.57□□□□□ -1.52
LMO3-229ENST00000543721 NID2Q14112 1375 aa5.57□□□□□ -1.52
LMO3-229ENST00000543721 TMEM2Q9UHN6 1383 aa5.57□□□□□ -1.52
LMO3-229ENST00000543721 MST1RQ04912 1400 aa5.57□□□□□ -1.52
LMO3-229ENST00000543721 M0R2C6 588 aa5.57□□□□□ -1.52
LMO3-229ENST00000543721 MYO1FO00160 1098 aa5.57□□□□□ -1.52
LMO3-229ENST00000543721 GTPBP6O43824 516 aaPredicted RBP5.57□□□□□ -1.52
LMO3-229ENST00000543721 GHRP10912 638 aa5.57□□□□□ -1.52
LMO3-229ENST00000543721 NR1D1P20393 614 aa5.57□□□□□ -1.52
LMO3-229ENST00000543721 CLNS1AP54105 237 aaKnown RBP5.57□□□□□ -1.52
LMO3-229ENST00000543721 SARNPP82979 210 aaKnown RBP5.57□□□□□ -1.52
LMO3-229ENST00000543721 UBXN1Q04323 297 aa5.57□□□□□ -1.52
LMO3-229ENST00000543721 DPYDQ12882 1025 aa5.57□□□□□ -1.52
LMO3-229ENST00000543721 MEA1Q16626 185 aa5.57□□□□□ -1.52
LMO3-229ENST00000543721 ZNF827Q17R98 1081 aa5.57□□□□□ -1.52
LMO3-229ENST00000543721 EPHA10Q5JZY3 1008 aa5.57□□□□□ -1.52
LMO3-229ENST00000543721 LRIG3Q6UXM1 1119 aa5.57□□□□□ -1.52
LMO3-229ENST00000543721 NLRP14Q86W24 1093 aa5.57□□□□□ -1.52
LMO3-229ENST00000543721 FAM114A1Q8IWE2 563 aa5.57□□□□□ -1.52
LMO3-229ENST00000543721 OSBP2Q969R2 916 aa5.57□□□□□ -1.52
LMO3-229ENST00000543721 PAGE5Q96GU1 130 aa5.57□□□□□ -1.52
LMO3-229ENST00000543721 CAPZA3Q96KX2 299 aa5.57□□□□□ -1.52
LMO3-229ENST00000543721 PURBQ96QR8 312 aaKnown RBP5.57□□□□□ -1.52
LMO3-229ENST00000543721 CNNM2Q9H8M5 875 aa5.57□□□□□ -1.52
LMO3-229ENST00000543721 STRN4Q9NRL3 753 aa5.57□□□□□ -1.52
LMO3-229ENST00000543721 CEP126Q9P2H0 1117 aa5.57□□□□□ -1.52
LMO3-229ENST00000543721 NFAT5O94916 1531 aa5.57□□□□□ -1.52
LMO3-229ENST00000543721 LGALS16A8MUM7 142 aa5.57□□□□□ -1.52
LMO3-229ENST00000543721 EYA2O00167 538 aa5.57□□□□□ -1.52
LMO3-229ENST00000543721 MDH1P40925 334 aaKnown RBP5.57□□□□□ -1.52
LMO3-229ENST00000543721 STX17P56962 302 aa5.57□□□□□ -1.52
LMO3-229ENST00000543721 PDCLQ13371 301 aa5.57□□□□□ -1.52
LMO3-229ENST00000543721 PPP2R5AQ15172 486 aa5.57□□□□□ -1.52
LMO3-229ENST00000543721 SPECC1Q5M775 1068 aa5.57□□□□□ -1.52
LMO3-229ENST00000543721 RRAGBQ5VZM2 374 aa5.57□□□□□ -1.52
LMO3-229ENST00000543721 RUFY4Q6ZNE9 571 aa5.57□□□□□ -1.52
LMO3-229ENST00000543721 CCDC13Q8IYE1 715 aa5.57□□□□□ -1.52
LMO3-229ENST00000543721 MB21D1Q8N884 522 aa5.57□□□□□ -1.52
LMO3-229ENST00000543721 ABTB2Q8N961 1025 aa5.57□□□□□ -1.52
LMO3-229ENST00000543721 XAGE3Q8WTP9 111 aa5.57□□□□□ -1.52
LMO3-229ENST00000543721 AIDAQ96BJ3 306 aa5.57□□□□□ -1.52
LMO3-229ENST00000543721 CCT8L2Q96SF2 557 aa5.57□□□□□ -1.52
LMO3-229ENST00000543721 SLC26A6Q9BXS9 759 aa5.57□□□□□ -1.52
LMO3-229ENST00000543721 SLC40A1Q9NP59 571 aa5.57□□□□□ -1.52
LMO3-229ENST00000543721 GPHNQ9NQX3 736 aaPredicted RBP5.57□□□□□ -1.52
LMO3-229ENST00000543721 SLC12A7Q9Y666 1083 aa5.57□□□□□ -1.52
LMO3-229ENST00000543721 DDX60Q8IY21 1712 aaKnown RBP5.57□□□□□ -1.52
LMO3-229ENST00000543721 A0A087WZG4 1122 aa5.56□□□□□ -1.52
LMO3-229ENST00000543721 GBP2P32456 591 aaPredicted RBP5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms