RNA–Protein interactions for RNA: ENST00000543660.1

NPIPB4-219, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

TSL 5

Gene NPIPB4, Length 353 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-219ENST00000543660 P2RX7Q99572 595 aaKnown RBP6.07□□□□□ -1.44
NPIPB4-219ENST00000543660 LRFN3Q9BTN0 628 aa6.07□□□□□ -1.44
NPIPB4-219ENST00000543660 ZNF576Q9H609 170 aa6.07□□□□□ -1.44
NPIPB4-219ENST00000543660 PDLIM7Q9NR12 457 aa6.07□□□□□ -1.44
NPIPB4-219ENST00000543660 TOR4AQ9NXH8 423 aa6.07□□□□□ -1.44
NPIPB4-219ENST00000543660 FLRT1Q9NZU1 646 aa6.07□□□□□ -1.44
NPIPB4-219ENST00000543660 RBPJLQ9UBG7 517 aa6.07□□□□□ -1.44
NPIPB4-219ENST00000543660 ATP11BQ9Y2G3 1177 aa6.07□□□□□ -1.44
NPIPB4-219ENST00000543660 RFX7Q2KHR2 1363 aa6.06□□□□□ -1.44
NPIPB4-219ENST00000543660 KIF16BQ96L93 1317 aa6.06□□□□□ -1.44
NPIPB4-219ENST00000543660 HSFX4A0A1B0GTS1 333 aaPredicted RBP6.06□□□□□ -1.44
NPIPB4-219ENST00000543660 HSFX3A0A1B0GWH4 333 aaPredicted RBP6.06□□□□□ -1.44
NPIPB4-219ENST00000543660 RCCD1A6NED2 376 aa6.06□□□□□ -1.44
NPIPB4-219ENST00000543660 GRM8O00222 908 aa6.06□□□□□ -1.44
NPIPB4-219ENST00000543660 APAF1O14727 1248 aa6.06□□□□□ -1.44
NPIPB4-219ENST00000543660 PDE8BO95263 885 aa6.06□□□□□ -1.44
NPIPB4-219ENST00000543660 CD2BP2O95400 341 aaKnown RBP6.06□□□□□ -1.44
NPIPB4-219ENST00000543660 IGHA2P01877 340 aa6.06□□□□□ -1.44
NPIPB4-219ENST00000543660 BMP1P13497 986 aa6.06□□□□□ -1.44
NPIPB4-219ENST00000543660 FGFR2P21802 821 aa6.06□□□□□ -1.44
NPIPB4-219ENST00000543660 MAPK4P31152 587 aa6.06□□□□□ -1.44
NPIPB4-219ENST00000543660 RGS2P41220 211 aa6.06□□□□□ -1.44
NPIPB4-219ENST00000543660 PABPC4Q13310 644 aaKnown RBP eCLIP6.06□□□□□ -1.44
NPIPB4-219ENST00000543660 ADGRE1Q14246 886 aa6.06□□□□□ -1.44
NPIPB4-219ENST00000543660 RALBP1Q15311 655 aa6.06□□□□□ -1.44
NPIPB4-219ENST00000543660 TRIM60Q495X7 471 aa6.06□□□□□ -1.44
NPIPB4-219ENST00000543660 GPR142Q7Z601 462 aa6.06□□□□□ -1.44
NPIPB4-219ENST00000543660 ALYREFQ86V81 257 aaKnown RBP6.06□□□□□ -1.44
NPIPB4-219ENST00000543660 SCUBE3Q8IX30 993 aa6.06□□□□□ -1.44
NPIPB4-219ENST00000543660 ZNF280CQ8ND82 737 aa6.06□□□□□ -1.44
NPIPB4-219ENST00000543660 GPRC5AQ8NFJ5 357 aa6.06□□□□□ -1.44
NPIPB4-219ENST00000543660 WDR66Q8TBY9 1149 aa6.06□□□□□ -1.44
NPIPB4-219ENST00000543660 TSR2Q969E8 191 aaKnown RBP6.06□□□□□ -1.44
NPIPB4-219ENST00000543660 RNPC3Q96LT9 517 aaKnown RBP6.06□□□□□ -1.44
NPIPB4-219ENST00000543660 APBA2Q99767 749 aa6.06□□□□□ -1.44
NPIPB4-219ENST00000543660 PORCNQ9H237 461 aa6.06□□□□□ -1.44
NPIPB4-219ENST00000543660 EPHX3Q9H6B9 360 aa6.06□□□□□ -1.44
NPIPB4-219ENST00000543660 DDX4Q9NQI0 724 aaKnown RBP6.06□□□□□ -1.44
NPIPB4-219ENST00000543660 PRDM5Q9NQX1 630 aaPredicted RBP6.06□□□□□ -1.44
NPIPB4-219ENST00000543660 GMPR2Q9P2T1 348 aaKnown RBP6.06□□□□□ -1.44
NPIPB4-219ENST00000543660 DDX20Q9UHI6 824 aaKnown RBP6.06□□□□□ -1.44
NPIPB4-219ENST00000543660 DACH1Q9UI36 760 aa6.06□□□□□ -1.44
NPIPB4-219ENST00000543660 HCN4Q9Y3Q4 1203 aa6.06□□□□□ -1.44
NPIPB4-219ENST00000543660 ADGRG1Q9Y653 693 aa6.06□□□□□ -1.44
NPIPB4-219ENST00000543660 DOCK1Q14185 1865 aa6.06□□□□□ -1.44
NPIPB4-219ENST00000543660 LOC285556D6RIA3 1793 aa6.06□□□□□ -1.44
NPIPB4-219ENST00000543660 RLFQ13129 1914 aa6.05□□□□□ -1.44
NPIPB4-219ENST00000543660 FRMPD3Q5JV73 1810 aa6.05□□□□□ -1.44
NPIPB4-219ENST00000543660 DOCK2Q92608 1830 aa6.05□□□□□ -1.44
NPIPB4-219ENST00000543660 RBM47A0AV96 593 aaKnown RBP6.05□□□□□ -1.44
NPIPB4-219ENST00000543660 F6X3S4 739 aa6.05□□□□□ -1.44
NPIPB4-219ENST00000543660 MSCO60682 206 aa6.05□□□□□ -1.44
NPIPB4-219ENST00000543660 BRD2P25440 801 aaKnown RBP6.05□□□□□ -1.44
NPIPB4-219ENST00000543660 HOXA7P31268 230 aaPredicted RBP6.05□□□□□ -1.44
NPIPB4-219ENST00000543660 HERVK_113P62684 666 aa6.05□□□□□ -1.44
NPIPB4-219ENST00000543660 PTGDRQ13258 359 aa6.05□□□□□ -1.44
NPIPB4-219ENST00000543660 RRP1BQ14684 758 aaKnown RBP6.05□□□□□ -1.44
NPIPB4-219ENST00000543660 WDR43Q15061 677 aaKnown RBP eCLIP6.05□□□□□ -1.44
NPIPB4-219ENST00000543660 TWISTNBQ3B726 338 aaPredicted RBP6.05□□□□□ -1.44
NPIPB4-219ENST00000543660 METTL24Q5JXM2 366 aa6.05□□□□□ -1.44
NPIPB4-219ENST00000543660 GJC2Q5T442 439 aaPredicted RBP6.05□□□□□ -1.44
NPIPB4-219ENST00000543660 C1orf53Q5VUE5 145 aa6.05□□□□□ -1.44
NPIPB4-219ENST00000543660 PLEKHH3Q7Z736 793 aa6.05□□□□□ -1.44
NPIPB4-219ENST00000543660 ZSCAN29Q8IWY8 852 aaPredicted RBP6.05□□□□□ -1.44
NPIPB4-219ENST00000543660 CYP4X1Q8N118 509 aa6.05□□□□□ -1.44
NPIPB4-219ENST00000543660 TRPV1Q8NER1 839 aa6.05□□□□□ -1.44
NPIPB4-219ENST00000543660 TIFAQ96CG3 184 aa6.05□□□□□ -1.44
NPIPB4-219ENST00000543660 SPSB2Q99619 263 aa6.05□□□□□ -1.44
NPIPB4-219ENST00000543660 TCF20Q9UGU0 1960 aaKnown RBP6.05□□□□□ -1.44
NPIPB4-219ENST00000543660 UTYO14607 1347 aa6.04□□□□□ -1.44
NPIPB4-219ENST00000543660 GAKO14976 1311 aa6.04□□□□□ -1.44
NPIPB4-219ENST00000543660 FAM196BA6NMK8 535 aa6.04□□□□□ -1.44
NPIPB4-219ENST00000543660 USP17L5A8MUK1 530 aa6.04□□□□□ -1.44
NPIPB4-219ENST00000543660 LDHBP07195 334 aaKnown RBP6.04□□□□□ -1.44
NPIPB4-219ENST00000543660 CNGA1P29973 690 aa6.04□□□□□ -1.44
NPIPB4-219ENST00000543660 ERVK-9P63128 1117 aa6.04□□□□□ -1.44
NPIPB4-219ENST00000543660 ERVK-24P63145 666 aa6.04□□□□□ -1.44
NPIPB4-219ENST00000543660 IRX3P78415 501 aaPredicted RBP6.04□□□□□ -1.44
NPIPB4-219ENST00000543660 TLE2Q04725 743 aa6.04□□□□□ -1.44
NPIPB4-219ENST00000543660 CCDC85BQ15834 202 aaPredicted RBP6.04□□□□□ -1.44
NPIPB4-219ENST00000543660 TMEM259Q4ZIN3 620 aa6.04□□□□□ -1.44
NPIPB4-219ENST00000543660 MFSD14CQ5VZR4 134 aa6.04□□□□□ -1.44
NPIPB4-219ENST00000543660 EDC3Q96F86 508 aaKnown RBP6.04□□□□□ -1.44
NPIPB4-219ENST00000543660 SUCLG2Q96I99 432 aa6.04□□□□□ -1.44
NPIPB4-219ENST00000543660 GAS2L1Q99501 681 aaPredicted RBP6.04□□□□□ -1.44
NPIPB4-219ENST00000543660 TBC1D2Q9BYX2 928 aa6.04□□□□□ -1.44
NPIPB4-219ENST00000543660 OSBPL5Q9H0X9 879 aaPredicted RBP6.04□□□□□ -1.44
NPIPB4-219ENST00000543660 BCL11AQ9H165 835 aa6.04□□□□□ -1.44
NPIPB4-219ENST00000543660 PRDM12Q9H4Q4 367 aa6.04□□□□□ -1.44
NPIPB4-219ENST00000543660 C11orf16Q9NQ32 467 aa6.04□□□□□ -1.44
NPIPB4-219ENST00000543660 CXXC1Q9P0U4 656 aaPredicted RBP6.04□□□□□ -1.44
NPIPB4-219ENST00000543660 WDFY4Q6ZS81 3184 aa6.04□□□□□ -1.44
NPIPB4-219ENST00000543660 MYBBP1AQ9BQG0 1328 aaKnown RBP6.03□□□□□ -1.44
NPIPB4-219ENST00000543660 SALL1Q9NSC2 1324 aa6.03□□□□□ -1.44
NPIPB4-219ENST00000543660 KIAA0355O15063 1070 aa6.03□□□□□ -1.44
NPIPB4-219ENST00000543660 HOXC6P09630 235 aa6.03□□□□□ -1.44
NPIPB4-219ENST00000543660 IFIT1P09914 478 aaKnown RBP6.03□□□□□ -1.44
NPIPB4-219ENST00000543660 CYBAP13498 195 aa6.03□□□□□ -1.44
NPIPB4-219ENST00000543660 CYP2C19P33261 490 aa6.03□□□□□ -1.44
NPIPB4-219ENST00000543660 ZEB1P37275 1124 aaPredicted RBP6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms