RNA–Protein interactions for RNA: ENST00000543162.1

DDB1-221, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-221ENST00000543162 SRBD1Q8N5C6 995 aaKnown RBP12.39□□□□□ -0.43
DDB1-221ENST00000543162 RNF26Q9BY78 433 aaPredicted RBP12.39□□□□□ -0.43
DDB1-221ENST00000543162 KIAA1683Q9H0B3 1180 aa12.39□□□□□ -0.43
DDB1-221ENST00000543162 VCPKMTQ9H867 229 aa12.39□□□□□ -0.43
DDB1-221ENST00000543162 GPCPD1Q9NPB8 672 aa12.39□□□□□ -0.43
DDB1-221ENST00000543162 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.39□□□□□ -0.43
DDB1-221ENST00000543162 SNCAIPQ9Y6H5 919 aa12.39□□□□□ -0.43
DDB1-221ENST00000543162 ZHX2Q9Y6X8 837 aa12.39□□□□□ -0.43
DDB1-221ENST00000543162 OTOFQ9HC10 1997 aa12.39□□□□□ -0.43
DDB1-221ENST00000543162 PAPPA2Q9BXP8 1791 aa12.38□□□□□ -0.43
DDB1-221ENST00000543162 USP17L10C9JJH3 530 aa12.38□□□□□ -0.43
DDB1-221ENST00000543162 UBE2Q2LH0YL09 131 aa12.38□□□□□ -0.43
DDB1-221ENST00000543162 FDPSP14324 419 aaKnown RBP12.38□□□□□ -0.43
DDB1-221ENST00000543162 SMARCA1P28370 1054 aa12.38□□□□□ -0.43
DDB1-221ENST00000543162 FKBP1BP68106 108 aa12.38□□□□□ -0.43
DDB1-221ENST00000543162 SPP2Q13103 211 aa12.38□□□□□ -0.43
DDB1-221ENST00000543162 LARP1BQ659C4 914 aaKnown RBP12.38□□□□□ -0.43
DDB1-221ENST00000543162 KCTD1Q719H9 257 aa12.38□□□□□ -0.43
DDB1-221ENST00000543162 SPICE1Q8N0Z3 855 aa12.38□□□□□ -0.43
DDB1-221ENST00000543162 ZNF280CQ8ND82 737 aa12.38□□□□□ -0.43
DDB1-221ENST00000543162 WASF1Q92558 559 aa12.38□□□□□ -0.43
DDB1-221ENST00000543162 V9GY48 417 aaPredicted RBP12.38□□□□□ -0.43
DDB1-221ENST00000543162 CNTNAP5Q8WYK1 1306 aa12.37□□□□□ -0.43
DDB1-221ENST00000543162 TRIM75PA6NK02 468 aa12.37□□□□□ -0.43
DDB1-221ENST00000543162 PRPF3O43395 683 aaKnown RBP12.37□□□□□ -0.43
DDB1-221ENST00000543162 CELF2O95319 508 aaKnown RBP12.37□□□□□ -0.43
DDB1-221ENST00000543162 DEXIO95424 95 aa12.37□□□□□ -0.43
DDB1-221ENST00000543162 ITGBL1O95965 494 aaPredicted RBP12.37□□□□□ -0.43
DDB1-221ENST00000543162 BMP3P12645 472 aa12.37□□□□□ -0.43
DDB1-221ENST00000543162 PDIA4P13667 645 aaKnown RBP12.37□□□□□ -0.43
DDB1-221ENST00000543162 SYT1P21579 422 aa12.37□□□□□ -0.43
DDB1-221ENST00000543162 USP14P54578 494 aa12.37□□□□□ -0.43
DDB1-221ENST00000543162 NUCB2P80303 420 aa12.37□□□□□ -0.43
DDB1-221ENST00000543162 MTMR2Q13614 643 aa12.37□□□□□ -0.43
DDB1-221ENST00000543162 LDLRAD1Q5T700 205 aa12.37□□□□□ -0.43
DDB1-221ENST00000543162 C2orf69Q8N8R5 385 aa12.37□□□□□ -0.43
DDB1-221ENST00000543162 LPAR1Q92633 364 aa12.37□□□□□ -0.43
DDB1-221ENST00000543162 CLMNQ96JQ2 1002 aa12.37□□□□□ -0.43
DDB1-221ENST00000543162 NUP88Q99567 741 aaPredicted RBP12.37□□□□□ -0.43
DDB1-221ENST00000543162 ALG1Q9BT22 464 aa12.37□□□□□ -0.43
DDB1-221ENST00000543162 SPZ1Q9BXG8 430 aa12.37□□□□□ -0.43
DDB1-221ENST00000543162 UBA5Q9GZZ9 404 aa12.37□□□□□ -0.43
DDB1-221ENST00000543162 ELP3Q9H9T3 547 aa12.37□□□□□ -0.43
DDB1-221ENST00000543162 GBA2Q9HCG7 927 aaPredicted RBP12.37□□□□□ -0.43
DDB1-221ENST00000543162 RBM27Q9P2N5 1060 aaKnown RBP12.37□□□□□ -0.43
DDB1-221ENST00000543162 VPS37CA5D8V6 355 aaPredicted RBP12.36□□□□□ -0.43
DDB1-221ENST00000543162 UNCXA6NJT0 531 aa12.36□□□□□ -0.43
DDB1-221ENST00000543162 C19orf81C9J6K1 198 aa12.36□□□□□ -0.43
DDB1-221ENST00000543162 H3BQV1 296 aa12.36□□□□□ -0.43
DDB1-221ENST00000543162 KIF3CO14782 793 aa12.36□□□□□ -0.43
DDB1-221ENST00000543162 STX6O43752 255 aa12.36□□□□□ -0.43
DDB1-221ENST00000543162 FOSBP53539 338 aa12.36□□□□□ -0.43
DDB1-221ENST00000543162 BACE1P56817 501 aa12.36□□□□□ -0.43
DDB1-221ENST00000543162 IKQ13123 557 aaPredicted RBP12.36□□□□□ -0.43
DDB1-221ENST00000543162 KIAA1755Q5JYT7 1200 aa12.36□□□□□ -0.43
DDB1-221ENST00000543162 FAM83BQ5T0W9 1011 aa12.36□□□□□ -0.43
DDB1-221ENST00000543162 IFFO2Q5TF58 517 aa12.36□□□□□ -0.43
DDB1-221ENST00000543162 TTBK2Q6IQ55 1244 aa12.36□□□□□ -0.43
DDB1-221ENST00000543162 ERO1BQ86YB8 467 aa12.36□□□□□ -0.43
DDB1-221ENST00000543162 RBM46Q8TBY0 533 aaKnown RBP12.36□□□□□ -0.43
DDB1-221ENST00000543162 PIBF1Q8WXW3 757 aa12.36□□□□□ -0.43
DDB1-221ENST00000543162 RRP36Q96EU6 259 aaKnown RBP12.36□□□□□ -0.43
DDB1-221ENST00000543162 C8orf76Q96K31 380 aa12.36□□□□□ -0.43
DDB1-221ENST00000543162 CPVLQ9H3G5 476 aa12.36□□□□□ -0.43
DDB1-221ENST00000543162 VAT1LQ9HCJ6 419 aa12.36□□□□□ -0.43
DDB1-221ENST00000543162 AFG3L2Q9Y4W6 797 aa12.36□□□□□ -0.43
DDB1-221ENST00000543162 MYH6P13533 1939 aa12.36□□□□□ -0.43
DDB1-221ENST00000543162 PHIPQ8WWQ0 1821 aa12.36□□□□□ -0.43
DDB1-221ENST00000543162 BAZ2BQ9UIF8 2168 aaKnown RBP12.36□□□□□ -0.43
DDB1-221ENST00000543162 WDR33Q9C0J8 1336 aaKnown RBP12.36□□□□□ -0.43
DDB1-221ENST00000543162 hCG_1642624A0A1W2PR95 340 aa12.35□□□□□ -0.43
DDB1-221ENST00000543162 SPDYE5A6NIY4 337 aa12.35□□□□□ -0.43
DDB1-221ENST00000543162 TMEM232C9JQI7 657 aa12.35□□□□□ -0.43
DDB1-221ENST00000543162 WDR46O15213 610 aaKnown RBP12.35□□□□□ -0.43
DDB1-221ENST00000543162 CYTH3O43739 400 aa12.35□□□□□ -0.43
DDB1-221ENST00000543162 SLC16A2P36021 539 aa12.35□□□□□ -0.43
DDB1-221ENST00000543162 PPATQ06203 517 aa12.35□□□□□ -0.43
DDB1-221ENST00000543162 PKP1Q13835 747 aa12.35□□□□□ -0.43
DDB1-221ENST00000543162 TRIM29Q14134 588 aa12.35□□□□□ -0.43
DDB1-221ENST00000543162 SLC35G1Q2M3R5 365 aa12.35□□□□□ -0.43
DDB1-221ENST00000543162 ADGRF4Q8IZF3 695 aa12.35□□□□□ -0.43
DDB1-221ENST00000543162 SLC10A4Q96EP9 437 aa12.35□□□□□ -0.43
DDB1-221ENST00000543162 OTUD5Q96G74 571 aa12.35□□□□□ -0.43
DDB1-221ENST00000543162 AIFM3Q96NN9 605 aa12.35□□□□□ -0.43
DDB1-221ENST00000543162 RIOX1Q9H6W3 641 aa12.35□□□□□ -0.43
DDB1-221ENST00000543162 EMILIN3Q9NT22 766 aa12.35□□□□□ -0.43
DDB1-221ENST00000543162 TMOD4Q9NZQ9 345 aa12.35□□□□□ -0.43
DDB1-221ENST00000543162 SEC63Q9UGP8 760 aaKnown RBP12.35□□□□□ -0.43
DDB1-221ENST00000543162 TRPM7Q96QT4 1865 aa12.34□□□□□ -0.43
DDB1-221ENST00000543162 SCG2P13521 617 aa12.34□□□□□ -0.43
DDB1-221ENST00000543162 XBP1P17861 261 aa12.34□□□□□ -0.43
DDB1-221ENST00000543162 STAT2P52630 851 aa12.34□□□□□ -0.43
DDB1-221ENST00000543162 HMGCS2P54868 508 aa12.34□□□□□ -0.43
DDB1-221ENST00000543162 PPIL2Q13356 520 aa12.34□□□□□ -0.43
DDB1-221ENST00000543162 PKN1Q16512 942 aa12.34□□□□□ -0.43
DDB1-221ENST00000543162 PFKFB3Q16875 520 aaPredicted RBP12.34□□□□□ -0.43
DDB1-221ENST00000543162 SYDE2Q5VT97 1194 aa12.34□□□□□ -0.43
DDB1-221ENST00000543162 BTNL9Q6UXG8 535 aa12.34□□□□□ -0.43
DDB1-221ENST00000543162 FAM160B2Q86V87 743 aa12.34□□□□□ -0.43
DDB1-221ENST00000543162 HOMER1Q86YM7 354 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms