RNA–Protein interactions for RNA: ENST00000542717.1

CHD4-209, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 204 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-209ENST00000542717 ASGR1P07306 291 aa4.16□□□□□ -1.74
CHD4-209ENST00000542717 BACE1P56817 501 aa4.16□□□□□ -1.74
CHD4-209ENST00000542717 IFIT5Q13325 482 aaKnown RBP4.16□□□□□ -1.74
CHD4-209ENST00000542717 ANGPT1Q15389 498 aa4.16□□□□□ -1.74
CHD4-209ENST00000542717 DIXDC1Q155Q3 683 aa4.16□□□□□ -1.74
CHD4-209ENST00000542717 KRT24Q2M2I5 525 aa4.16□□□□□ -1.74
CHD4-209ENST00000542717 CAVIN4Q5BKX8 364 aa4.16□□□□□ -1.74
CHD4-209ENST00000542717 PPM1JQ5JR12 505 aa4.16□□□□□ -1.74
CHD4-209ENST00000542717 PRR23BQ6ZRT6 265 aa4.16□□□□□ -1.74
CHD4-209ENST00000542717 SHCBP1Q8NEM2 672 aa4.16□□□□□ -1.74
CHD4-209ENST00000542717 MRPL38Q96DV4 380 aaKnown RBP4.16□□□□□ -1.74
CHD4-209ENST00000542717 FAM84BQ96KN1 310 aaPredicted RBP4.16□□□□□ -1.74
CHD4-209ENST00000542717 RPGRIP1Q96KN7 1286 aa4.16□□□□□ -1.74
CHD4-209ENST00000542717 RTKNQ9BST9 563 aa4.16□□□□□ -1.74
CHD4-209ENST00000542717 WNT8AQ9H1J5 351 aa4.16□□□□□ -1.74
CHD4-209ENST00000542717 NSUN3Q9H649 340 aaKnown RBP4.16□□□□□ -1.74
CHD4-209ENST00000542717 IGFLR1Q9H665 355 aa4.16□□□□□ -1.74
CHD4-209ENST00000542717 NCDNQ9UBB6 729 aa4.16□□□□□ -1.74
CHD4-209ENST00000542717 CD207Q9UJ71 328 aa4.16□□□□□ -1.74
CHD4-209ENST00000542717 ANGPTL2Q9UKU9 493 aa4.16□□□□□ -1.74
CHD4-209ENST00000542717 LHX6Q9UPM6 363 aa4.16□□□□□ -1.74
CHD4-209ENST00000542717 CNPY2Q9Y2B0 182 aa4.16□□□□□ -1.74
CHD4-209ENST00000542717 SUGT1Q9Y2Z0 365 aa4.16□□□□□ -1.74
CHD4-209ENST00000542717 LAS1LQ9Y4W2 734 aaKnown RBP4.16□□□□□ -1.74
CHD4-209ENST00000542717 PCDHGC5Q9Y5F6 944 aa4.16□□□□□ -1.74
CHD4-209ENST00000542717 TRIOO75962 3097 aa4.16□□□□□ -1.74
CHD4-209ENST00000542717 SYNRGQ9UMZ2 1314 aa4.16□□□□□ -1.74
CHD4-209ENST00000542717 VPS13AQ96RL7 3174 aa4.15□□□□□ -1.74
CHD4-209ENST00000542717 LOC285556D6RIA3 1793 aa4.15□□□□□ -1.74
CHD4-209ENST00000542717 LINC01553A4QN01 128 aa4.15□□□□□ -1.75
CHD4-209ENST00000542717 DDTLA6NHG4 134 aaPredicted RBP4.15□□□□□ -1.75
CHD4-209ENST00000542717 CYSRT1A8MQ03 144 aa4.15□□□□□ -1.75
CHD4-209ENST00000542717 USP17L15C9J2P7 530 aa4.15□□□□□ -1.75
CHD4-209ENST00000542717 USP17L13C9JLJ4 530 aa4.15□□□□□ -1.75
CHD4-209ENST00000542717 USP17L11C9JVI0 530 aa4.15□□□□□ -1.75
CHD4-209ENST00000542717 USP17L18D6R9N7 530 aa4.15□□□□□ -1.75
CHD4-209ENST00000542717 USP17L22D6RA61 530 aa4.15□□□□□ -1.75
CHD4-209ENST00000542717 USP17L17D6RBQ6 530 aa4.15□□□□□ -1.75
CHD4-209ENST00000542717 USP17L19D6RCP7 530 aa4.15□□□□□ -1.75
CHD4-209ENST00000542717 USP17L20D6RJB6 530 aa4.15□□□□□ -1.75
CHD4-209ENST00000542717 COBLO75128 1261 aa4.15□□□□□ -1.75
CHD4-209ENST00000542717 CNMDO75829 334 aa4.15□□□□□ -1.75
CHD4-209ENST00000542717 CD4P01730 458 aa4.15□□□□□ -1.75
CHD4-209ENST00000542717 ERVK-21P61565 698 aa4.15□□□□□ -1.75
CHD4-209ENST00000542717 USP17L24Q0WX57 530 aa4.15□□□□□ -1.75
CHD4-209ENST00000542717 NEXNQ0ZGT2 675 aa4.15□□□□□ -1.75
CHD4-209ENST00000542717 UBE4AQ14139 1066 aa4.15□□□□□ -1.75
CHD4-209ENST00000542717 PLS1Q14651 629 aa4.15□□□□□ -1.75
CHD4-209ENST00000542717 NEUROD2Q15784 382 aa4.15□□□□□ -1.75
CHD4-209ENST00000542717 GNASQ5JWF2 1037 aa4.15□□□□□ -1.75
CHD4-209ENST00000542717 ASTLQ6HA08 431 aaPredicted RBP4.15□□□□□ -1.75
CHD4-209ENST00000542717 FAM117BQ6P1L5 589 aa4.15□□□□□ -1.75
CHD4-209ENST00000542717 LRSAM1Q6UWE0 723 aa4.15□□□□□ -1.75
CHD4-209ENST00000542717 LDHAL6AQ6ZMR3 332 aa4.15□□□□□ -1.75
CHD4-209ENST00000542717 TMCO2Q7Z6W1 182 aaPredicted RBP4.15□□□□□ -1.75
CHD4-209ENST00000542717 CDCA7LQ96GN5 454 aa4.15□□□□□ -1.75
CHD4-209ENST00000542717 MAML3Q96JK9 1138 aa4.15□□□□□ -1.75
CHD4-209ENST00000542717 METTL22Q9BUU2 404 aaPredicted RBP4.15□□□□□ -1.75
CHD4-209ENST00000542717 NOC4LQ9BVI4 516 aaKnown RBP4.15□□□□□ -1.75
CHD4-209ENST00000542717 MBIPQ9NS73 344 aa4.15□□□□□ -1.75
CHD4-209ENST00000542717 NRBP1Q9UHY1 535 aa4.15□□□□□ -1.75
CHD4-209ENST00000542717 ZHX1Q9UKY1 873 aaPredicted RBP4.15□□□□□ -1.75
CHD4-209ENST00000542717 ZMIZ1Q9ULJ6 1067 aa4.15□□□□□ -1.75
CHD4-209ENST00000542717 R4GN57 208 aa4.15□□□□□ -1.75
CHD4-209ENST00000542717 NAV2Q8IVL1 2488 aa4.15□□□□□ -1.75
CHD4-209ENST00000542717 MYH3P11055 1940 aa4.15□□□□□ -1.75
CHD4-209ENST00000542717 MYO15AQ9UKN7 3530 aa4.15□□□□□ -1.75
CHD4-209ENST00000542717 MAST4O15021 2626 aa4.14□□□□□ -1.75
CHD4-209ENST00000542717 DOCK2Q92608 1830 aa4.14□□□□□ -1.75
CHD4-209ENST00000542717 MYADML2A6NDP7 307 aa4.14□□□□□ -1.75
CHD4-209ENST00000542717 PRR5-ARHGAP8B1AHC4 643 aa4.14□□□□□ -1.75
CHD4-209ENST00000542717 LOC730098B7Z3J9 87 aa4.14□□□□□ -1.75
CHD4-209ENST00000542717 CSPG5O95196 566 aa4.14□□□□□ -1.75
CHD4-209ENST00000542717 PROS1P07225 676 aa4.14□□□□□ -1.75
CHD4-209ENST00000542717 TAL1P17542 331 aaPredicted RBP4.14□□□□□ -1.75
CHD4-209ENST00000542717 ICAM3P32942 547 aa4.14□□□□□ -1.75
CHD4-209ENST00000542717 LTBRP36941 435 aa4.14□□□□□ -1.75
CHD4-209ENST00000542717 CAP2P40123 477 aa4.14□□□□□ -1.75
CHD4-209ENST00000542717 NDUFV1P49821 464 aa4.14□□□□□ -1.75
CHD4-209ENST00000542717 ARHGAP8P85298 464 aa4.14□□□□□ -1.75
CHD4-209ENST00000542717 MAP3K10Q02779 954 aa4.14□□□□□ -1.75
CHD4-209ENST00000542717 LMNB2Q03252 620 aa4.14□□□□□ -1.75
CHD4-209ENST00000542717 DLX2Q07687 328 aaPredicted RBP4.14□□□□□ -1.75
CHD4-209ENST00000542717 GPM6BQ13491 265 aa4.14□□□□□ -1.75
CHD4-209ENST00000542717 ITGA7Q13683 1181 aa4.14□□□□□ -1.75
CHD4-209ENST00000542717 ZYXQ15942 572 aaKnown RBP4.14□□□□□ -1.75
CHD4-209ENST00000542717 PTPN21Q16825 1174 aa4.14□□□□□ -1.75
CHD4-209ENST00000542717 ZC3H14Q6PJT7 736 aaKnown RBP4.14□□□□□ -1.75
CHD4-209ENST00000542717 USP17L2Q6R6M4 530 aa4.14□□□□□ -1.75
CHD4-209ENST00000542717 SH3BP5LQ7L8J4 393 aa4.14□□□□□ -1.75
CHD4-209ENST00000542717 NCAPG2Q86XI2 1143 aa4.14□□□□□ -1.75
CHD4-209ENST00000542717 RETREG2Q8NC44 543 aa4.14□□□□□ -1.75
CHD4-209ENST00000542717 KLHDC9Q8NEP7 349 aa4.14□□□□□ -1.75
CHD4-209ENST00000542717 FLCNQ8NFG4 579 aa4.14□□□□□ -1.75
CHD4-209ENST00000542717 RAD9AQ99638 391 aa4.14□□□□□ -1.75
CHD4-209ENST00000542717 FEZ1Q99689 392 aa4.14□□□□□ -1.75
CHD4-209ENST00000542717 C17orf80Q9BSJ5 609 aa4.14□□□□□ -1.75
CHD4-209ENST00000542717 WDR18Q9BV38 432 aa4.14□□□□□ -1.75
CHD4-209ENST00000542717 TRPV6Q9H1D0 765 aa4.14□□□□□ -1.75
CHD4-209ENST00000542717 PHAXQ9H814 394 aaKnown RBP4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms