RNA–Protein interactions for RNA: ENST00000542714.5

CHFR-221, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 4

Gene CHFR, Length 542 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-221ENST00000542714 SCG2P13521 617 aa15.35■□□□□ 0.05
CHFR-221ENST00000542714 AKAP17AQ02040 695 aaKnown RBP15.35■□□□□ 0.05
CHFR-221ENST00000542714 KIF23Q02241 960 aaPredicted RBP15.35■□□□□ 0.05
CHFR-221ENST00000542714 DNM1Q05193 864 aaKnown RBP15.35■□□□□ 0.05
CHFR-221ENST00000542714 TTBK2Q6IQ55 1244 aa15.35■□□□□ 0.05
CHFR-221ENST00000542714 PIBF1Q8WXW3 757 aa15.35■□□□□ 0.05
CHFR-221ENST00000542714 DCPSQ96C86 337 aaKnown RBP15.35■□□□□ 0.05
CHFR-221ENST00000542714 HOOK2Q96ED9 719 aa15.35■□□□□ 0.05
CHFR-221ENST00000542714 GLIS2Q9BZE0 524 aaPredicted RBP15.35■□□□□ 0.05
CHFR-221ENST00000542714 UBA5Q9GZZ9 404 aa15.35■□□□□ 0.05
CHFR-221ENST00000542714 ZSCAN16Q9H4T2 348 aaPredicted RBP15.35■□□□□ 0.05
CHFR-221ENST00000542714 RIOX1Q9H6W3 641 aa15.35■□□□□ 0.05
CHFR-221ENST00000542714 GINM1Q9NU53 330 aa15.35■□□□□ 0.05
CHFR-221ENST00000542714 KCNJ14Q9UNX9 436 aa15.35■□□□□ 0.05
CHFR-221ENST00000542714 CNPY2Q9Y2B0 182 aa15.35■□□□□ 0.05
CHFR-221ENST00000542714 TMX2Q9Y320 296 aa15.35■□□□□ 0.05
CHFR-221ENST00000542714 DDX11L8A8MPP1 907 aa15.34■□□□□ 0.05
CHFR-221ENST00000542714 F5H6K3 240 aa15.34■□□□□ 0.05
CHFR-221ENST00000542714 MMP1P03956 469 aa15.34■□□□□ 0.05
CHFR-221ENST00000542714 ASNSP08243 561 aa15.34■□□□□ 0.05
CHFR-221ENST00000542714 KLRC3Q07444 240 aa15.34■□□□□ 0.05
CHFR-221ENST00000542714 CCDC96Q2M329 555 aa15.34■□□□□ 0.05
CHFR-221ENST00000542714 KCTD1Q719H9 257 aa15.34■□□□□ 0.05
CHFR-221ENST00000542714 ZC3H15Q8WU90 426 aaKnown RBP15.34■□□□□ 0.05
CHFR-221ENST00000542714 GMCL1Q96IK5 515 aa15.34■□□□□ 0.05
CHFR-221ENST00000542714 ARHGEF10LQ9HCE6 1279 aa15.34■□□□□ 0.05
CHFR-221ENST00000542714 VPS54Q9P1Q0 977 aa15.34■□□□□ 0.05
CHFR-221ENST00000542714 RBM27Q9P2N5 1060 aaKnown RBP15.34■□□□□ 0.05
CHFR-221ENST00000542714 ATP6V1DQ9Y5K8 247 aa15.34■□□□□ 0.05
CHFR-221ENST00000542714 PARP14Q460N5 1801 aa15.33■□□□□ 0.05
CHFR-221ENST00000542714 IQCA1LA6NCM1 817 aa15.33■□□□□ 0.04
CHFR-221ENST00000542714 TRIM29Q14134 588 aa15.33■□□□□ 0.04
CHFR-221ENST00000542714 NPY5RQ15761 445 aa15.33■□□□□ 0.04
CHFR-221ENST00000542714 GPATCH4Q5T3I0 446 aaKnown RBP15.33■□□□□ 0.04
CHFR-221ENST00000542714 SULF1Q8IWU6 871 aa15.33■□□□□ 0.04
CHFR-221ENST00000542714 PIGSQ96S52 555 aa15.33■□□□□ 0.04
CHFR-221ENST00000542714 NUP88Q99567 741 aaPredicted RBP15.33■□□□□ 0.04
CHFR-221ENST00000542714 PHF20Q9BVI0 1012 aa15.33■□□□□ 0.04
CHFR-221ENST00000542714 LMBRD1Q9NUN5 540 aa15.33■□□□□ 0.04
CHFR-221ENST00000542714 PTPRFP10586 1907 aa15.33■□□□□ 0.04
CHFR-221ENST00000542714 U2AF2P26368 475 aaKnown RBP eCLIP15.32■□□□□ 0.04
CHFR-221ENST00000542714 SLC16A2P36021 539 aa15.32■□□□□ 0.04
CHFR-221ENST00000542714 SUPT20HL1Q3ZLR7 823 aa15.32■□□□□ 0.04
CHFR-221ENST00000542714 WWC2Q6AWC2 1192 aa15.32■□□□□ 0.04
CHFR-221ENST00000542714 TYW1BQ6NUM6 668 aa15.32■□□□□ 0.04
CHFR-221ENST00000542714 KRT26Q7Z3Y9 468 aa15.32■□□□□ 0.04
CHFR-221ENST00000542714 SCYL3Q8IZE3 742 aa15.32■□□□□ 0.04
CHFR-221ENST00000542714 TMEM87AQ8NBN3 555 aa15.32■□□□□ 0.04
CHFR-221ENST00000542714 OXER1Q8TDS5 423 aa15.32■□□□□ 0.04
CHFR-221ENST00000542714 GPKOWQ92917 476 aaPredicted RBP eCLIP15.32■□□□□ 0.04
CHFR-221ENST00000542714 KLRG1Q96E93 195 aa15.32■□□□□ 0.04
CHFR-221ENST00000542714 MTMR8Q96EF0 704 aa15.32■□□□□ 0.04
CHFR-221ENST00000542714 WRNIP1Q96S55 665 aa15.32■□□□□ 0.04
CHFR-221ENST00000542714 VCPKMTQ9H867 229 aa15.32■□□□□ 0.04
CHFR-221ENST00000542714 JMJD4Q9H9V9 463 aa15.32■□□□□ 0.04
CHFR-221ENST00000542714 GDPD2Q9HCC8 539 aa15.32■□□□□ 0.04
CHFR-221ENST00000542714 STXBP3O00186 592 aa15.31■□□□□ 0.04
CHFR-221ENST00000542714 ADAMTS3O15072 1205 aa15.31■□□□□ 0.04
CHFR-221ENST00000542714 USP2O75604 605 aaPredicted RBP15.31■□□□□ 0.04
CHFR-221ENST00000542714 SLC1A4P43007 532 aa15.31■□□□□ 0.04
CHFR-221ENST00000542714 EAPPQ56P03 285 aaPredicted RBP15.31■□□□□ 0.04
CHFR-221ENST00000542714 NOL9Q5SY16 702 aaKnown RBP15.31■□□□□ 0.04
CHFR-221ENST00000542714 BRAPQ7Z569 592 aa15.31■□□□□ 0.04
CHFR-221ENST00000542714 USP48Q86UV5 1035 aa15.31■□□□□ 0.04
CHFR-221ENST00000542714 DIS3L2Q8IYB7 885 aaKnown RBP15.31■□□□□ 0.04
CHFR-221ENST00000542714 ADGRF4Q8IZF3 695 aa15.31■□□□□ 0.04
CHFR-221ENST00000542714 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.31■□□□□ 0.04
CHFR-221ENST00000542714 ZKSCAN4Q969J2 545 aaPredicted RBP15.31■□□□□ 0.04
CHFR-221ENST00000542714 RRP36Q96EU6 259 aaKnown RBP15.31■□□□□ 0.04
CHFR-221ENST00000542714 VAT1LQ9HCJ6 419 aa15.31■□□□□ 0.04
CHFR-221ENST00000542714 GOPCQ9HD26 462 aa15.31■□□□□ 0.04
CHFR-221ENST00000542714 SH3GLB2Q9NR46 395 aa15.31■□□□□ 0.04
CHFR-221ENST00000542714 BTBD18B2RXH4 712 aa15.3■□□□□ 0.04
CHFR-221ENST00000542714 USP17L10C9JJH3 530 aa15.3■□□□□ 0.04
CHFR-221ENST00000542714 GOLGA6L22H0YM25 854 aa15.3■□□□□ 0.04
CHFR-221ENST00000542714 RAD21O60216 631 aa15.3■□□□□ 0.04
CHFR-221ENST00000542714 POTEIP0CG38 1075 aa15.3■□□□□ 0.04
CHFR-221ENST00000542714 POTEJP0CG39 1038 aa15.3■□□□□ 0.04
CHFR-221ENST00000542714 BMP3P12645 472 aa15.3■□□□□ 0.04
CHFR-221ENST00000542714 MYSM1Q5VVJ2 828 aa15.3■□□□□ 0.04
CHFR-221ENST00000542714 BTNL9Q6UXG8 535 aa15.3■□□□□ 0.04
CHFR-221ENST00000542714 HOMER1Q86YM7 354 aa15.3■□□□□ 0.04
CHFR-221ENST00000542714 SPICE1Q8N0Z3 855 aa15.3■□□□□ 0.04
CHFR-221ENST00000542714 TNFRSF25Q93038 417 aa15.3■□□□□ 0.04
CHFR-221ENST00000542714 CDCA5Q96FF9 252 aa15.3■□□□□ 0.04
CHFR-221ENST00000542714 FTOQ9C0B1 505 aaKnown RBP eCLIP15.3■□□□□ 0.04
CHFR-221ENST00000542714 SH2D4AQ9H788 454 aa15.3■□□□□ 0.04
CHFR-221ENST00000542714 TFIP11Q9UBB9 837 aaKnown RBP15.3■□□□□ 0.04
CHFR-221ENST00000542714 FIBPO43427 364 aa15.29■□□□□ 0.04
CHFR-221ENST00000542714 PPP1R11O60927 126 aaPredicted RBP15.29■□□□□ 0.04
CHFR-221ENST00000542714 PRPF40AO75400 957 aaKnown RBP15.29■□□□□ 0.04
CHFR-221ENST00000542714 XBP1P17861 261 aa15.29■□□□□ 0.04
CHFR-221ENST00000542714 PTPRAP18433 802 aa15.29■□□□□ 0.04
CHFR-221ENST00000542714 NCLP19338 710 aaKnown RBP15.29■□□□□ 0.04
CHFR-221ENST00000542714 KRT85P78386 507 aa15.29■□□□□ 0.04
CHFR-221ENST00000542714 NR5A1Q13285 461 aa15.29■□□□□ 0.04
CHFR-221ENST00000542714 ZYXQ15942 572 aaKnown RBP15.29■□□□□ 0.04
CHFR-221ENST00000542714 HEATR3Q7Z4Q2 680 aa15.29■□□□□ 0.04
CHFR-221ENST00000542714 USP28Q96RU2 1077 aa15.29■□□□□ 0.04
CHFR-221ENST00000542714 WDR18Q9BV38 432 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms