RNA–Protein interactions for RNA: ENST00000542552.1

ECHDC2-223, Transcript of enoyl-CoA hydratase domain containing 2, humanhuman

TSL 1 (best)

Gene ECHDC2, Length 981 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC2-223ENST00000542552 ELNP15502 786 aa18.3■□□□□ 0.52
ECHDC2-223ENST00000542552 PPP4R3BQ5MIZ7 849 aa18.3■□□□□ 0.52
ECHDC2-223ENST00000542552 MORN1Q5T089 497 aa18.3■□□□□ 0.52
ECHDC2-223ENST00000542552 AKNAD1Q5T1N1 836 aa18.3■□□□□ 0.52
ECHDC2-223ENST00000542552 TBC1D10CQ8IV04 446 aa18.3■□□□□ 0.52
ECHDC2-223ENST00000542552 NUP88Q99567 741 aaPredicted RBP18.3■□□□□ 0.52
ECHDC2-223ENST00000542552 PPP1R9AQ9ULJ8 1098 aa18.3■□□□□ 0.52
ECHDC2-223ENST00000542552 ZNF213O14771 459 aa18.29■□□□□ 0.52
ECHDC2-223ENST00000542552 NMT2O60551 498 aa18.29■□□□□ 0.52
ECHDC2-223ENST00000542552 XRCC5P13010 732 aaKnown RBP18.29■□□□□ 0.52
ECHDC2-223ENST00000542552 MLLT1Q03111 559 aaPredicted RBP18.29■□□□□ 0.52
ECHDC2-223ENST00000542552 MTFR1Q15390 333 aa18.29■□□□□ 0.52
ECHDC2-223ENST00000542552 LRRC47Q8N1G4 583 aaKnown RBP18.29■□□□□ 0.52
ECHDC2-223ENST00000542552 SHCBP1Q8NEM2 672 aa18.29■□□□□ 0.52
ECHDC2-223ENST00000542552 SOCS4Q8WXH5 440 aa18.29■□□□□ 0.52
ECHDC2-223ENST00000542552 NUDT12Q9BQG2 462 aa18.29■□□□□ 0.52
ECHDC2-223ENST00000542552 MOV10L1Q9BXT6 1211 aaKnown RBP18.29■□□□□ 0.52
ECHDC2-223ENST00000542552 SPATC1LQ9H0A9 340 aa18.29■□□□□ 0.52
ECHDC2-223ENST00000542552 TCP11L1Q9NUJ3 509 aa18.29■□□□□ 0.52
ECHDC2-223ENST00000542552 VWA5AO00534 786 aa18.28■□□□□ 0.52
ECHDC2-223ENST00000542552 RAD21O60216 631 aa18.28■□□□□ 0.52
ECHDC2-223ENST00000542552 TMEM132BQ14DG7 1078 aa18.28■□□□□ 0.52
ECHDC2-223ENST00000542552 MFSD6Q6ZSS7 791 aa18.28■□□□□ 0.52
ECHDC2-223ENST00000542552 CCAR1Q8IX12 1150 aaKnown RBP18.28■□□□□ 0.52
ECHDC2-223ENST00000542552 REPS2Q8NFH8 660 aa18.28■□□□□ 0.52
ECHDC2-223ENST00000542552 NKX2-3Q8TAU0 364 aa18.28■□□□□ 0.52
ECHDC2-223ENST00000542552 RUFY2Q8WXA3 655 aa18.28■□□□□ 0.52
ECHDC2-223ENST00000542552 TMEM106CQ9BVX2 250 aa18.28■□□□□ 0.52
ECHDC2-223ENST00000542552 SLC15A5A6NIM6 579 aa18.27■□□□□ 0.52
ECHDC2-223ENST00000542552 INHAP05111 366 aa18.27■□□□□ 0.52
ECHDC2-223ENST00000542552 CCL5P13501 91 aa18.27■□□□□ 0.52
ECHDC2-223ENST00000542552 PTPREP23469 700 aa18.27■□□□□ 0.52
ECHDC2-223ENST00000542552 NT5C2P49902 561 aa18.27■□□□□ 0.52
ECHDC2-223ENST00000542552 UBXN2AP68543 259 aa18.27■□□□□ 0.52
ECHDC2-223ENST00000542552 SLFN13Q68D06 897 aa18.27■□□□□ 0.52
ECHDC2-223ENST00000542552 GMCL1Q96IK5 515 aa18.27■□□□□ 0.52
ECHDC2-223ENST00000542552 SLF1Q9BQI6 1058 aa18.27■□□□□ 0.52
ECHDC2-223ENST00000542552 RNF41Q9H4P4 317 aaPredicted RBP18.27■□□□□ 0.52
ECHDC2-223ENST00000542552 BIN2Q9UBW5 565 aaPredicted RBP18.27■□□□□ 0.52
ECHDC2-223ENST00000542552 CTNNA3Q9UI47 895 aa18.27■□□□□ 0.52
ECHDC2-223ENST00000542552 STX8Q9UNK0 236 aa18.27■□□□□ 0.52
ECHDC2-223ENST00000542552 ZNF236Q9UL36 1845 aa18.27■□□□□ 0.52
ECHDC2-223ENST00000542552 SGSM2O43147 1006 aa18.26■□□□□ 0.51
ECHDC2-223ENST00000542552 MYCP01106 439 aaPredicted RBP18.26■□□□□ 0.51
ECHDC2-223ENST00000542552 EN2P19622 333 aaPredicted RBP18.26■□□□□ 0.51
ECHDC2-223ENST00000542552 CYP2B6P20813 491 aa18.26■□□□□ 0.51
ECHDC2-223ENST00000542552 GRB14Q14449 540 aa18.26■□□□□ 0.51
ECHDC2-223ENST00000542552 RRP12Q5JTH9 1297 aaKnown RBP18.26■□□□□ 0.51
ECHDC2-223ENST00000542552 SKAP1Q86WV1 359 aa18.26■□□□□ 0.51
ECHDC2-223ENST00000542552 PRPF38AQ8NAV1 312 aaKnown RBP18.26■□□□□ 0.51
ECHDC2-223ENST00000542552 TOMM22Q9NS69 142 aa18.26■□□□□ 0.51
ECHDC2-223ENST00000542552 FEM1BQ9UK73 627 aa18.26■□□□□ 0.51
ECHDC2-223ENST00000542552 ZNF214Q9UL59 606 aaPredicted RBP18.26■□□□□ 0.51
ECHDC2-223ENST00000542552 NEDD4P46934 1319 aa18.25■□□□□ 0.51
ECHDC2-223ENST00000542552 STRNO43815 780 aa18.25■□□□□ 0.51
ECHDC2-223ENST00000542552 HMGCRP04035 888 aa18.25■□□□□ 0.51
ECHDC2-223ENST00000542552 BMP3P12645 472 aa18.25■□□□□ 0.51
ECHDC2-223ENST00000542552 ERCC3P19447 782 aa18.25■□□□□ 0.51
ECHDC2-223ENST00000542552 RGS2P41220 211 aa18.25■□□□□ 0.51
ECHDC2-223ENST00000542552 MAP2K5Q13163 448 aa18.25■□□□□ 0.51
ECHDC2-223ENST00000542552 IMMTQ16891 758 aaKnown RBP18.25■□□□□ 0.51
ECHDC2-223ENST00000542552 RCSD1Q6JBY9 416 aa18.25■□□□□ 0.51
ECHDC2-223ENST00000542552 TRIB2Q92519 343 aa18.25■□□□□ 0.51
ECHDC2-223ENST00000542552 UNC93B1Q9H1C4 597 aa18.25■□□□□ 0.51
ECHDC2-223ENST00000542552 MROH8Q9H579 483 aa18.25■□□□□ 0.51
ECHDC2-223ENST00000542552 SLC25A27O95847 323 aa18.24■□□□□ 0.51
ECHDC2-223ENST00000542552 GJB1P08034 283 aa18.24■□□□□ 0.51
ECHDC2-223ENST00000542552 HOXC6P09630 235 aa18.24■□□□□ 0.51
ECHDC2-223ENST00000542552 PTH1RQ03431 593 aa18.24■□□□□ 0.51
ECHDC2-223ENST00000542552 BMP2KLQ5H9B9 411 aa18.24■□□□□ 0.51
ECHDC2-223ENST00000542552 WDR78Q5VTH9 848 aa18.24■□□□□ 0.51
ECHDC2-223ENST00000542552 SAMD1Q6SPF0 538 aaPredicted RBP18.24■□□□□ 0.51
ECHDC2-223ENST00000542552 RIOX2Q8IUF8 465 aa18.24■□□□□ 0.51
ECHDC2-223ENST00000542552 TRMT44Q8IYL2 757 aaKnown RBP18.24■□□□□ 0.51
ECHDC2-223ENST00000542552 ESR2Q92731 530 aa18.24■□□□□ 0.51
ECHDC2-223ENST00000542552 CCDC136Q96JN2 1154 aa18.24■□□□□ 0.51
ECHDC2-223ENST00000542552 TTC14Q96N46 770 aa18.24■□□□□ 0.51
ECHDC2-223ENST00000542552 APBA2Q99767 749 aa18.24■□□□□ 0.51
ECHDC2-223ENST00000542552 RNF208Q9H0X6 261 aa18.24■□□□□ 0.51
ECHDC2-223ENST00000542552 CWC22Q9HCG8 908 aaKnown RBP18.24■□□□□ 0.51
ECHDC2-223ENST00000542552 ATP2A1O14983 1001 aa18.23■□□□□ 0.51
ECHDC2-223ENST00000542552 PLA2G6O60733 806 aa18.23■□□□□ 0.51
ECHDC2-223ENST00000542552 IGHA2P01877 340 aa18.23■□□□□ 0.51
ECHDC2-223ENST00000542552 TOP1P11387 765 aaKnown RBP18.23■□□□□ 0.51
ECHDC2-223ENST00000542552 MCCP23508 829 aa18.23■□□□□ 0.51
ECHDC2-223ENST00000542552 STAT3P40763 770 aa18.23■□□□□ 0.51
ECHDC2-223ENST00000542552 GJA8P48165 433 aa18.23■□□□□ 0.51
ECHDC2-223ENST00000542552 TRIM32Q13049 653 aa18.23■□□□□ 0.51
ECHDC2-223ENST00000542552 PLS1Q14651 629 aa18.23■□□□□ 0.51
ECHDC2-223ENST00000542552 MAP3K21Q5TCX8 1036 aa18.23■□□□□ 0.51
ECHDC2-223ENST00000542552 ABRAQ8N0Z2 381 aa18.23■□□□□ 0.51
ECHDC2-223ENST00000542552 TMEM47Q9BQJ4 181 aa18.23■□□□□ 0.51
ECHDC2-223ENST00000542552 SLC38A10Q9HBR0 1119 aa18.23■□□□□ 0.51
ECHDC2-223ENST00000542552 PAK6Q9NQU5 681 aaPredicted RBP18.23■□□□□ 0.51
ECHDC2-223ENST00000542552 IVNS1ABPQ9Y6Y0 642 aa18.23■□□□□ 0.51
ECHDC2-223ENST00000542552 ZNFX1Q9P2E3 1918 aaKnown RBP18.23■□□□□ 0.51
ECHDC2-223ENST00000542552 SLC1A4P43007 532 aa18.22■□□□□ 0.51
ECHDC2-223ENST00000542552 CCL14Q16627 93 aa18.22■□□□□ 0.51
ECHDC2-223ENST00000542552 SHISA4Q96DD7 197 aa18.22■□□□□ 0.51
ECHDC2-223ENST00000542552 PDE4DIPQ5VU43 2346 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms