RNA–Protein interactions for RNA: ENST00000542032.1

LEMD3-204, Transcript of LEM domain containing 3, humanhuman

TSL 3

Gene LEMD3, Length 645 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-204ENST00000542032 KIAA1522Q9P206 1035 aaPredicted RBP6.18□□□□□ -1.42
LEMD3-204ENST00000542032 DUSP13Q9UII6 198 aa6.18□□□□□ -1.42
LEMD3-204ENST00000542032 TMEM59LQ9UK28 342 aa6.18□□□□□ -1.42
LEMD3-204ENST00000542032 ZNRF3Q9ULT6 936 aa6.18□□□□□ -1.42
LEMD3-204ENST00000542032 MCM4P33991 863 aa6.17□□□□□ -1.42
LEMD3-204ENST00000542032 RNF4P78317 190 aa6.17□□□□□ -1.42
LEMD3-204ENST00000542032 NBPF9Q3BBW0 867 aa6.17□□□□□ -1.42
LEMD3-204ENST00000542032 INTS3Q68E01 1043 aaKnown RBP6.17□□□□□ -1.42
LEMD3-204ENST00000542032 ADAMTS10Q9H324 1103 aa6.17□□□□□ -1.42
LEMD3-204ENST00000542032 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.17□□□□□ -1.42
LEMD3-204ENST00000542032 SLAMF8Q9P0V8 285 aa6.17□□□□□ -1.42
LEMD3-204ENST00000542032 LRRC10BA6NIK2 292 aa6.16□□□□□ -1.42
LEMD3-204ENST00000542032 TSPAN15O95858 294 aa6.16□□□□□ -1.42
LEMD3-204ENST00000542032 HPXP02790 462 aa6.16□□□□□ -1.42
LEMD3-204ENST00000542032 GLI1P08151 1106 aa6.16□□□□□ -1.42
LEMD3-204ENST00000542032 ZGLP1P0C6A0 271 aa6.16□□□□□ -1.42
LEMD3-204ENST00000542032 TEKQ02763 1124 aa6.16□□□□□ -1.42
LEMD3-204ENST00000542032 EGR3Q06889 387 aa6.16□□□□□ -1.42
LEMD3-204ENST00000542032 KCNMB1Q16558 191 aa6.16□□□□□ -1.42
LEMD3-204ENST00000542032 TTC6Q86TZ1 520 aa6.16□□□□□ -1.42
LEMD3-204ENST00000542032 TMEM192Q8IY95 271 aa6.16□□□□□ -1.42
LEMD3-204ENST00000542032 TAB3Q8N5C8 712 aaPredicted RBP6.16□□□□□ -1.42
LEMD3-204ENST00000542032 RBBP8NLQ8NC74 664 aaPredicted RBP6.16□□□□□ -1.42
LEMD3-204ENST00000542032 SYTL5Q8TDW5 730 aaPredicted RBP6.16□□□□□ -1.42
LEMD3-204ENST00000542032 MRRFQ96E11 262 aaKnown RBP6.16□□□□□ -1.42
LEMD3-204ENST00000542032 KIRREL1Q96J84 757 aa6.16□□□□□ -1.42
LEMD3-204ENST00000542032 SLC9A7Q96T83 725 aa6.16□□□□□ -1.42
LEMD3-204ENST00000542032 PCDHA11Q9Y5I1 949 aa6.16□□□□□ -1.42
LEMD3-204ENST00000542032 UNCXA6NJT0 531 aa6.15□□□□□ -1.42
LEMD3-204ENST00000542032 ACRP10323 421 aa6.15□□□□□ -1.42
LEMD3-204ENST00000542032 IMPDH2P12268 514 aa6.15□□□□□ -1.42
LEMD3-204ENST00000542032 NMIQ13287 307 aaPredicted RBP6.15□□□□□ -1.42
LEMD3-204ENST00000542032 ANKLE2Q86XL3 938 aa6.15□□□□□ -1.42
LEMD3-204ENST00000542032 USHBP1Q8N6Y0 703 aa6.15□□□□□ -1.42
LEMD3-204ENST00000542032 DAGLBQ8NCG7 672 aa6.15□□□□□ -1.42
LEMD3-204ENST00000542032 FAM53CQ9NYF3 392 aa6.15□□□□□ -1.42
LEMD3-204ENST00000542032 CLEC3AO75596 197 aa6.14□□□□□ -1.43
LEMD3-204ENST00000542032 SNW1Q13573 536 aaKnown RBP6.14□□□□□ -1.43
LEMD3-204ENST00000542032 ZNF654Q8IZM8 581 aa6.14□□□□□ -1.43
LEMD3-204ENST00000542032 RASGRP4Q8TDF6 673 aa6.14□□□□□ -1.43
LEMD3-204ENST00000542032 LTKP29376 864 aa6.13□□□□□ -1.43
LEMD3-204ENST00000542032 ERVFC1P60507 584 aa6.13□□□□□ -1.43
LEMD3-204ENST00000542032 HDLBPQ00341 1268 aaKnown RBP6.13□□□□□ -1.43
LEMD3-204ENST00000542032 COL9A2Q14055 689 aaPredicted RBP6.13□□□□□ -1.43
LEMD3-204ENST00000542032 NR0B2Q15466 257 aa6.13□□□□□ -1.43
LEMD3-204ENST00000542032 TMC3Q7Z5M5 1100 aa6.13□□□□□ -1.43
LEMD3-204ENST00000542032 PDZD8Q8NEN9 1154 aa6.13□□□□□ -1.43
LEMD3-204ENST00000542032 LINC01599Q8WXQ3 324 aa6.13□□□□□ -1.43
LEMD3-204ENST00000542032 C20orf173Q96LM9 149 aa6.13□□□□□ -1.43
LEMD3-204ENST00000542032 SLC6A18Q96N87 628 aa6.13□□□□□ -1.43
LEMD3-204ENST00000542032 G6PC3Q9BUM1 346 aa6.13□□□□□ -1.43
LEMD3-204ENST00000542032 EBF1Q9UH73 591 aa6.13□□□□□ -1.43
LEMD3-204ENST00000542032 SOX9P48436 509 aa6.12□□□□□ -1.43
LEMD3-204ENST00000542032 HK2P52789 917 aa6.12□□□□□ -1.43
LEMD3-204ENST00000542032 PAK2Q13177 524 aa6.12□□□□□ -1.43
LEMD3-204ENST00000542032 MLANAQ16655 118 aa6.12□□□□□ -1.43
LEMD3-204ENST00000542032 CLEC16AQ2KHT3 1053 aa6.12□□□□□ -1.43
LEMD3-204ENST00000542032 TMEM67Q5HYA8 995 aa6.12□□□□□ -1.43
LEMD3-204ENST00000542032 RNF111Q6ZNA4 994 aa6.12□□□□□ -1.43
LEMD3-204ENST00000542032 ZNF655Q8N720 491 aaPredicted RBP6.12□□□□□ -1.43
LEMD3-204ENST00000542032 LINC00116Q8NCU8 138 aa6.12□□□□□ -1.43
LEMD3-204ENST00000542032 ABHD4Q8TB40 342 aa6.12□□□□□ -1.43
LEMD3-204ENST00000542032 RELTQ969Z4 430 aa6.12□□□□□ -1.43
LEMD3-204ENST00000542032 TCTN2Q96GX1 697 aa6.12□□□□□ -1.43
LEMD3-204ENST00000542032 LIN37Q96GY3 246 aaPredicted RBP6.12□□□□□ -1.43
LEMD3-204ENST00000542032 TM9SF2Q99805 663 aa6.12□□□□□ -1.43
LEMD3-204ENST00000542032 PRDM14Q9GZV8 571 aa6.12□□□□□ -1.43
LEMD3-204ENST00000542032 PRR13Q9NZ81 148 aa6.12□□□□□ -1.43
LEMD3-204ENST00000542032 SHOXO15266 292 aa6.11□□□□□ -1.43
LEMD3-204ENST00000542032 SIGLEC6O43699 453 aa6.11□□□□□ -1.43
LEMD3-204ENST00000542032 RAC2P15153 192 aa6.11□□□□□ -1.43
LEMD3-204ENST00000542032 GJA8P48165 433 aa6.11□□□□□ -1.43
LEMD3-204ENST00000542032 CHMP4BP1P59074 171 aa6.11□□□□□ -1.43
LEMD3-204ENST00000542032 NT5DC4Q86YG4 428 aa6.11□□□□□ -1.43
LEMD3-204ENST00000542032 MYLIPQ8WY64 445 aa6.11□□□□□ -1.43
LEMD3-204ENST00000542032 DHX38Q92620 1227 aaKnown RBP6.11□□□□□ -1.43
LEMD3-204ENST00000542032 ZNF512BQ96KM6 892 aaPredicted RBP6.11□□□□□ -1.43
LEMD3-204ENST00000542032 SPATA32Q96LK8 384 aa6.11□□□□□ -1.43
LEMD3-204ENST00000542032 ASCC2Q9H1I8 757 aaPredicted RBP6.11□□□□□ -1.43
LEMD3-204ENST00000542032 TMPRSS5Q9H3S3 457 aa6.11□□□□□ -1.43
LEMD3-204ENST00000542032 GINM1Q9NU53 330 aa6.11□□□□□ -1.43
LEMD3-204ENST00000542032 SUCOQ9UBS9 1254 aaKnown RBP6.11□□□□□ -1.43
LEMD3-204ENST00000542032 PPT2Q9UMR5 302 aa6.11□□□□□ -1.43
LEMD3-204ENST00000542032 PRAMEF1O95521 474 aa6.1□□□□□ -1.43
LEMD3-204ENST00000542032 HOXA5P20719 270 aa6.1□□□□□ -1.43
LEMD3-204ENST00000542032 GGNQ86UU5 652 aa6.1□□□□□ -1.43
LEMD3-204ENST00000542032 LILRA2Q8N149 483 aa6.1□□□□□ -1.43
LEMD3-204ENST00000542032 DHRS1Q96LJ7 313 aa6.1□□□□□ -1.43
LEMD3-204ENST00000542032 FERD3LQ96RJ6 166 aa6.1□□□□□ -1.43
LEMD3-204ENST00000542032 PPP1R16BQ96T49 567 aa6.1□□□□□ -1.43
LEMD3-204ENST00000542032 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.1□□□□□ -1.43
LEMD3-204ENST00000542032 TMEM82A0PJX8 343 aa6.09□□□□□ -1.43
LEMD3-204ENST00000542032 FITM1A5D6W6 292 aa6.09□□□□□ -1.43
LEMD3-204ENST00000542032 NOTOA8MTQ0 251 aa6.09□□□□□ -1.43
LEMD3-204ENST00000542032 C9IYK1 514 aa6.09□□□□□ -1.43
LEMD3-204ENST00000542032 GUCY2CP25092 1073 aa6.09□□□□□ -1.43
LEMD3-204ENST00000542032 PMS1P54277 932 aaKnown RBP6.09□□□□□ -1.43
LEMD3-204ENST00000542032 AUHQ13825 339 aaKnown RBP6.09□□□□□ -1.43
LEMD3-204ENST00000542032 BBS9Q3SYG4 887 aa6.09□□□□□ -1.43
LEMD3-204ENST00000542032 TIGD5Q53EQ6 642 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms