RNA–Protein interactions for RNA: ENST00000541963.5

CPSF7-220, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4 BASIC

Gene CPSF7, Length 549 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-220ENST00000541963 TRIM28Q13263 835 aaKnown RBP7.2□□□□□ -1.26
CPSF7-220ENST00000541963 HSP90AB2PQ58FF8 381 aa7.2□□□□□ -1.26
CPSF7-220ENST00000541963 HGSNATQ68CP4 663 aa7.2□□□□□ -1.26
CPSF7-220ENST00000541963 GRIN3AQ8TCU5 1115 aa7.2□□□□□ -1.26
CPSF7-220ENST00000541963 STK35Q8TDR2 534 aa7.2□□□□□ -1.26
CPSF7-220ENST00000541963 WHAMMQ8TF30 809 aa7.2□□□□□ -1.26
CPSF7-220ENST00000541963 GATAD2BQ8WXI9 593 aa7.2□□□□□ -1.26
CPSF7-220ENST00000541963 RAPGEF4Q8WZA2 1011 aa7.2□□□□□ -1.26
CPSF7-220ENST00000541963 EAF1Q96JC9 268 aaPredicted RBP7.2□□□□□ -1.26
CPSF7-220ENST00000541963 RAD18Q9NS91 495 aa7.2□□□□□ -1.26
CPSF7-220ENST00000541963 KRT82Q9NSB4 513 aa7.2□□□□□ -1.26
CPSF7-220ENST00000541963 EFR3BQ9Y2G0 817 aa7.2□□□□□ -1.26
CPSF7-220ENST00000541963 PARP4Q9UKK3 1724 aaKnown RBP7.2□□□□□ -1.26
CPSF7-220ENST00000541963 KIF7Q2M1P5 1343 aa7.2□□□□□ -1.26
CPSF7-220ENST00000541963 INSRP06213 1382 aa7.2□□□□□ -1.26
CPSF7-220ENST00000541963 MYOM1P52179 1685 aa7.19□□□□□ -1.26
CPSF7-220ENST00000541963 RGPD1P0DJD0 1748 aa7.19□□□□□ -1.26
CPSF7-220ENST00000541963 TLR3O15455 904 aaKnown RBP7.19□□□□□ -1.26
CPSF7-220ENST00000541963 F13A1P00488 732 aa7.19□□□□□ -1.26
CPSF7-220ENST00000541963 SLFN14P0C7P3 912 aa7.19□□□□□ -1.26
CPSF7-220ENST00000541963 MCM4P33991 863 aa7.19□□□□□ -1.26
CPSF7-220ENST00000541963 TNNT2P45379 298 aaPredicted RBP7.19□□□□□ -1.26
CPSF7-220ENST00000541963 DGKGP49619 791 aa7.19□□□□□ -1.26
CPSF7-220ENST00000541963 ZNF165P49910 485 aa7.19□□□□□ -1.26
CPSF7-220ENST00000541963 SEPT6Q14141 434 aa7.19□□□□□ -1.26
CPSF7-220ENST00000541963 MPP2Q14168 576 aa7.19□□□□□ -1.26
CPSF7-220ENST00000541963 SETDB1Q15047 1291 aa7.19□□□□□ -1.26
CPSF7-220ENST00000541963 BNC2Q6ZN30 1099 aaPredicted RBP7.19□□□□□ -1.26
CPSF7-220ENST00000541963 PODNQ7Z5L7 613 aa7.19□□□□□ -1.26
CPSF7-220ENST00000541963 MARCH10Q8NA82 808 aaPredicted RBP7.19□□□□□ -1.26
CPSF7-220ENST00000541963 ZCRB1Q8TBF4 217 aaKnown RBP7.19□□□□□ -1.26
CPSF7-220ENST00000541963 UBP1Q9NZI7 540 aa7.19□□□□□ -1.26
CPSF7-220ENST00000541963 MKL2Q9ULH7 1088 aa7.19□□□□□ -1.26
CPSF7-220ENST00000541963 STRIP2Q9ULQ0 834 aa7.19□□□□□ -1.26
CPSF7-220ENST00000541963 PCDHA4Q9UN74 947 aa7.19□□□□□ -1.26
CPSF7-220ENST00000541963 WASHC2AQ641Q2 1341 aa7.19□□□□□ -1.26
CPSF7-220ENST00000541963 PARD3Q8TEW0 1356 aa7.19□□□□□ -1.26
CPSF7-220ENST00000541963 PLSCR1O15162 318 aa7.18□□□□□ -1.26
CPSF7-220ENST00000541963 STK10O94804 968 aaKnown RBP7.18□□□□□ -1.26
CPSF7-220ENST00000541963 GARTP22102 1010 aa7.18□□□□□ -1.26
CPSF7-220ENST00000541963 NASPP49321 788 aaPredicted RBP7.18□□□□□ -1.26
CPSF7-220ENST00000541963 ZNF252P-AS1Q0IIN9 211 aa7.18□□□□□ -1.26
CPSF7-220ENST00000541963 SEZ6Q53EL9 994 aa7.18□□□□□ -1.26
CPSF7-220ENST00000541963 PRRT3Q5FWE3 981 aa7.18□□□□□ -1.26
CPSF7-220ENST00000541963 SOGA3Q5TF21 947 aa7.18□□□□□ -1.26
CPSF7-220ENST00000541963 NBPF6Q5VWK0 638 aa7.18□□□□□ -1.26
CPSF7-220ENST00000541963 ZNF385CQ66K41 422 aaPredicted RBP7.18□□□□□ -1.26
CPSF7-220ENST00000541963 PDZD3Q86UT5 571 aa7.18□□□□□ -1.26
CPSF7-220ENST00000541963 ARMC5Q96C12 935 aa7.18□□□□□ -1.26
CPSF7-220ENST00000541963 NBPF4Q96M43 638 aa7.18□□□□□ -1.26
CPSF7-220ENST00000541963 POLKQ9UBT6 870 aa7.18□□□□□ -1.26
CPSF7-220ENST00000541963 FAM208AQ9UK61 1670 aaKnown RBP7.18□□□□□ -1.26
CPSF7-220ENST00000541963 DISP2A7MBM2 1401 aa7.18□□□□□ -1.26
CPSF7-220ENST00000541963 BCL9O00512 1426 aa7.18□□□□□ -1.26
CPSF7-220ENST00000541963 GNB5O14775 395 aa7.17□□□□□ -1.26
CPSF7-220ENST00000541963 HMGB2P26583 209 aaKnown RBP7.17□□□□□ -1.26
CPSF7-220ENST00000541963 RPL6Q02878 288 aaKnown RBP7.17□□□□□ -1.26
CPSF7-220ENST00000541963 EZH2Q15910 746 aaKnown RBP7.17□□□□□ -1.26
CPSF7-220ENST00000541963 DUOXA2Q1HG44 320 aa7.17□□□□□ -1.26
CPSF7-220ENST00000541963 HDXQ7Z353 690 aa7.17□□□□□ -1.26
CPSF7-220ENST00000541963 FBXO11Q86XK2 927 aa7.17□□□□□ -1.26
CPSF7-220ENST00000541963 ELMO3Q96BJ8 720 aa7.17□□□□□ -1.26
CPSF7-220ENST00000541963 CAMKK2Q96RR4 588 aa7.17□□□□□ -1.26
CPSF7-220ENST00000541963 CRBNQ96SW2 442 aa7.17□□□□□ -1.26
CPSF7-220ENST00000541963 PLVAPQ9BX97 442 aa7.17□□□□□ -1.26
CPSF7-220ENST00000541963 GINM1Q9NU53 330 aa7.17□□□□□ -1.26
CPSF7-220ENST00000541963 NOP53Q9NZM5 478 aaKnown RBP7.17□□□□□ -1.26
CPSF7-220ENST00000541963 MAP2P11137 1827 aaKnown RBP7.17□□□□□ -1.26
CPSF7-220ENST00000541963 TNS2Q63HR2 1409 aa7.17□□□□□ -1.26
CPSF7-220ENST00000541963 WNK3Q9BYP7 1800 aa7.16□□□□□ -1.26
CPSF7-220ENST00000541963 A0A0A0MRY4 1105 aa7.16□□□□□ -1.26
CPSF7-220ENST00000541963 CILPO75339 1184 aa7.16□□□□□ -1.26
CPSF7-220ENST00000541963 ZEB1P37275 1124 aaPredicted RBP7.16□□□□□ -1.26
CPSF7-220ENST00000541963 RASIP1Q5U651 963 aa7.16□□□□□ -1.26
CPSF7-220ENST00000541963 SLITRK4Q8IW52 837 aa7.16□□□□□ -1.26
CPSF7-220ENST00000541963 BEND7Q8N7W2 519 aaPredicted RBP7.16□□□□□ -1.26
CPSF7-220ENST00000541963 GALNT11Q8NCW6 608 aa7.16□□□□□ -1.26
CPSF7-220ENST00000541963 GPBAR1Q8TDU6 330 aa7.16□□□□□ -1.26
CPSF7-220ENST00000541963 LRRC3Q9BY71 257 aa7.16□□□□□ -1.26
CPSF7-220ENST00000541963 CCDC86Q9H6F5 360 aaKnown RBP7.16□□□□□ -1.26
CPSF7-220ENST00000541963 PICK1Q9NRD5 415 aa7.16□□□□□ -1.26
CPSF7-220ENST00000541963 SNCAIPQ9Y6H5 919 aa7.16□□□□□ -1.26
CPSF7-220ENST00000541963 LRRC37A3O60309 1634 aa7.16□□□□□ -1.26
CPSF7-220ENST00000541963 FAM221AA4D161 298 aa7.15□□□□□ -1.26
CPSF7-220ENST00000541963 DEAF1O75398 565 aaPredicted RBP7.15□□□□□ -1.26
CPSF7-220ENST00000541963 COL9A3Q14050 684 aaPredicted RBP7.15□□□□□ -1.26
CPSF7-220ENST00000541963 EXOSC6Q5RKV6 272 aaKnown RBP7.15□□□□□ -1.26
CPSF7-220ENST00000541963 CC2D1BQ5T0F9 858 aaKnown RBP7.15□□□□□ -1.26
CPSF7-220ENST00000541963 FBXW10Q5XX13 1052 aa7.15□□□□□ -1.26
CPSF7-220ENST00000541963 MCF2L2Q86YR7 1114 aa7.15□□□□□ -1.26
CPSF7-220ENST00000541963 FMR1NBQ8N0W7 255 aaPredicted RBP7.15□□□□□ -1.26
CPSF7-220ENST00000541963 USHBP1Q8N6Y0 703 aa7.15□□□□□ -1.26
CPSF7-220ENST00000541963 DHX38Q92620 1227 aaKnown RBP7.15□□□□□ -1.26
CPSF7-220ENST00000541963 FERD3LQ96RJ6 166 aa7.15□□□□□ -1.26
CPSF7-220ENST00000541963 R3HCC1Q9Y3T6 440 aaKnown RBP7.15□□□□□ -1.26
CPSF7-220ENST00000541963 ANKRD26Q9UPS8 1709 aa7.15□□□□□ -1.27
CPSF7-220ENST00000541963 LOC100289279A0A1B0GTE1 492 aa7.14□□□□□ -1.27
CPSF7-220ENST00000541963 DDX3YO15523 660 aaKnown RBP7.14□□□□□ -1.27
CPSF7-220ENST00000541963 IMPDH2P12268 514 aa7.14□□□□□ -1.27
CPSF7-220ENST00000541963 LIG1P18858 919 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms