RNA–Protein interactions for RNA: ENST00000541899.1

LRTOMT-219, Transcript of leucine rich transmembrane and O-methyltransferase domain containing, humanhuman

TSL 5

Gene LRTOMT, Length 540 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTOMT-219ENST00000541899 NOGQ13253 232 aa18.13■□□□□ 0.49
LRTOMT-219ENST00000541899 CYP4F22Q6NT55 531 aa18.13■□□□□ 0.49
LRTOMT-219ENST00000541899 CTCFLQ8NI51 663 aaPredicted RBP18.13■□□□□ 0.49
LRTOMT-219ENST00000541899 CHMP4CQ96CF2 233 aa18.13■□□□□ 0.49
LRTOMT-219ENST00000541899 SH2B1Q9NRF2 756 aaPredicted RBP18.13■□□□□ 0.49
LRTOMT-219ENST00000541899 RBM28Q9NW13 759 aaKnown RBP18.13■□□□□ 0.49
LRTOMT-219ENST00000541899 MAD2L2Q9UI95 211 aa18.13■□□□□ 0.49
LRTOMT-219ENST00000541899 AGTPBP1Q9UPW5 1226 aa18.13■□□□□ 0.49
LRTOMT-219ENST00000541899 GOLGA8BA8MQT2 603 aa18.12■□□□□ 0.49
LRTOMT-219ENST00000541899 PFKFB2O60825 505 aa18.12■□□□□ 0.49
LRTOMT-219ENST00000541899 TM4SF4P48230 202 aa18.12■□□□□ 0.49
LRTOMT-219ENST00000541899 GNAQP50148 359 aa18.12■□□□□ 0.49
LRTOMT-219ENST00000541899 METAP2P50579 478 aaKnown RBP eCLIP18.12■□□□□ 0.49
LRTOMT-219ENST00000541899 PABPC4Q13310 644 aaKnown RBP eCLIP18.12■□□□□ 0.49
LRTOMT-219ENST00000541899 ME3Q16798 604 aa18.12■□□□□ 0.49
LRTOMT-219ENST00000541899 GPAT2Q6NUI2 795 aa18.12■□□□□ 0.49
LRTOMT-219ENST00000541899 BTNL9Q6UXG8 535 aa18.12■□□□□ 0.49
LRTOMT-219ENST00000541899 ANKRD23Q86SG2 305 aa18.12■□□□□ 0.49
LRTOMT-219ENST00000541899 MICU3Q86XE3 530 aa18.12■□□□□ 0.49
LRTOMT-219ENST00000541899 SPICE1Q8N0Z3 855 aa18.12■□□□□ 0.49
LRTOMT-219ENST00000541899 NUP133Q8WUM0 1156 aa18.12■□□□□ 0.49
LRTOMT-219ENST00000541899 CAPNS2Q96L46 248 aa18.12■□□□□ 0.49
LRTOMT-219ENST00000541899 LZTS2Q9BRK4 669 aa18.12■□□□□ 0.49
LRTOMT-219ENST00000541899 ZCCHC17Q9NP64 241 aaKnown RBP18.12■□□□□ 0.49
LRTOMT-219ENST00000541899 FEM1BQ9UK73 627 aa18.12■□□□□ 0.49
LRTOMT-219ENST00000541899 PARP14Q460N5 1801 aa18.12■□□□□ 0.49
LRTOMT-219ENST00000541899 CCL15-CCL14A0A0B4J2E2 113 aa18.11■□□□□ 0.49
LRTOMT-219ENST00000541899 GOLGA8AA7E2F4 631 aa18.11■□□□□ 0.49
LRTOMT-219ENST00000541899 USP17L15C9J2P7 530 aa18.11■□□□□ 0.49
LRTOMT-219ENST00000541899 USP17L13C9JLJ4 530 aa18.11■□□□□ 0.49
LRTOMT-219ENST00000541899 USP17L11C9JVI0 530 aa18.11■□□□□ 0.49
LRTOMT-219ENST00000541899 USP17L18D6R9N7 530 aa18.11■□□□□ 0.49
LRTOMT-219ENST00000541899 USP17L22D6RA61 530 aa18.11■□□□□ 0.49
LRTOMT-219ENST00000541899 USP17L17D6RBQ6 530 aa18.11■□□□□ 0.49
LRTOMT-219ENST00000541899 USP17L19D6RCP7 530 aa18.11■□□□□ 0.49
LRTOMT-219ENST00000541899 USP17L20D6RJB6 530 aa18.11■□□□□ 0.49
LRTOMT-219ENST00000541899 USP17L24Q0WX57 530 aa18.11■□□□□ 0.49
LRTOMT-219ENST00000541899 SREBF2Q12772 1141 aa18.11■□□□□ 0.49
LRTOMT-219ENST00000541899 DGKZQ13574 1117 aa18.11■□□□□ 0.49
LRTOMT-219ENST00000541899 CCL15Q16663 113 aa18.11■□□□□ 0.49
LRTOMT-219ENST00000541899 RTN1Q16799 776 aa18.11■□□□□ 0.49
LRTOMT-219ENST00000541899 FAM83BQ5T0W9 1011 aa18.11■□□□□ 0.49
LRTOMT-219ENST00000541899 GADL1Q6ZQY3 521 aa18.11■□□□□ 0.49
LRTOMT-219ENST00000541899 CATSPERGQ6ZRH7 1159 aa18.11■□□□□ 0.49
LRTOMT-219ENST00000541899 FAM160B2Q86V87 743 aa18.11■□□□□ 0.49
LRTOMT-219ENST00000541899 CHURC1Q8WUH1 139 aa18.11■□□□□ 0.49
LRTOMT-219ENST00000541899 BRI3BPQ8WY22 251 aa18.11■□□□□ 0.49
LRTOMT-219ENST00000541899 LARP6Q9BRS8 491 aaKnown RBP18.11■□□□□ 0.49
LRTOMT-219ENST00000541899 MYL10Q9BUA6 226 aa18.11■□□□□ 0.49
LRTOMT-219ENST00000541899 SLKQ9H2G2 1235 aaPredicted RBP18.11■□□□□ 0.49
LRTOMT-219ENST00000541899 RPAP3Q9H6T3 665 aaPredicted RBP18.11■□□□□ 0.49
LRTOMT-219ENST00000541899 FAM217BQ9NTX9 383 aaPredicted RBP18.11■□□□□ 0.49
LRTOMT-219ENST00000541899 MYPNQ86TC9 1320 aa18.1■□□□□ 0.49
LRTOMT-219ENST00000541899 WDR33Q9C0J8 1336 aaKnown RBP18.1■□□□□ 0.49
LRTOMT-219ENST00000541899 RAD21O60216 631 aa18.1■□□□□ 0.49
LRTOMT-219ENST00000541899 MAP2K2P36507 400 aa18.1■□□□□ 0.49
LRTOMT-219ENST00000541899 MKRN3Q13064 507 aaKnown RBP18.1■□□□□ 0.49
LRTOMT-219ENST00000541899 MTMR7Q9Y216 660 aa18.1■□□□□ 0.49
LRTOMT-219ENST00000541899 RLFQ13129 1914 aa18.1■□□□□ 0.49
LRTOMT-219ENST00000541899 KLRF2D3W0D1 207 aa18.09■□□□□ 0.49
LRTOMT-219ENST00000541899 DHX16O60231 1041 aaKnown RBP18.09■□□□□ 0.49
LRTOMT-219ENST00000541899 RXRAP19793 462 aa18.09■□□□□ 0.49
LRTOMT-219ENST00000541899 CDC27P30260 824 aa18.09■□□□□ 0.49
LRTOMT-219ENST00000541899 STAT2P52630 851 aa18.09■□□□□ 0.49
LRTOMT-219ENST00000541899 SCRN1Q12765 414 aa18.09■□□□□ 0.49
LRTOMT-219ENST00000541899 CCDC96Q2M329 555 aa18.09■□□□□ 0.49
LRTOMT-219ENST00000541899 TREML2Q5T2D2 321 aa18.09■□□□□ 0.49
LRTOMT-219ENST00000541899 PAXIP1Q6ZW49 1069 aaPredicted RBP18.09■□□□□ 0.49
LRTOMT-219ENST00000541899 KCTD1Q719H9 257 aa18.09■□□□□ 0.49
LRTOMT-219ENST00000541899 STAG2Q8N3U4 1231 aa18.09■□□□□ 0.49
LRTOMT-219ENST00000541899 GTF3C6Q969F1 213 aa18.09■□□□□ 0.49
LRTOMT-219ENST00000541899 TMX3Q96JJ7 454 aa18.09■□□□□ 0.49
LRTOMT-219ENST00000541899 NUP88Q99567 741 aaPredicted RBP18.09■□□□□ 0.49
LRTOMT-219ENST00000541899 PTPN18Q99952 460 aa18.09■□□□□ 0.49
LRTOMT-219ENST00000541899 HOXC10Q9NYD6 342 aa18.09■□□□□ 0.49
LRTOMT-219ENST00000541899 NAP1L2Q9ULW6 460 aaPredicted RBP18.09■□□□□ 0.49
LRTOMT-219ENST00000541899 THSD7BQ9C0I4 1608 aa18.09■□□□□ 0.49
LRTOMT-219ENST00000541899 FRMPD2Q68DX3 1309 aaPredicted RBP18.08■□□□□ 0.49
LRTOMT-219ENST00000541899 BTBD19C9JJ37 291 aa18.08■□□□□ 0.48
LRTOMT-219ENST00000541899 TMEM232C9JQI7 657 aa18.08■□□□□ 0.48
LRTOMT-219ENST00000541899 LARGE1O95461 756 aa18.08■□□□□ 0.48
LRTOMT-219ENST00000541899 FDX1P10109 184 aa18.08■□□□□ 0.48
LRTOMT-219ENST00000541899 ADD1P35611 737 aaKnown RBP18.08■□□□□ 0.48
LRTOMT-219ENST00000541899 VEGFBP49765 207 aa18.08■□□□□ 0.48
LRTOMT-219ENST00000541899 KIF23Q02241 960 aaPredicted RBP18.08■□□□□ 0.48
LRTOMT-219ENST00000541899 COG2Q14746 738 aa18.08■□□□□ 0.48
LRTOMT-219ENST00000541899 TMTC3Q6ZXV5 915 aa18.08■□□□□ 0.48
LRTOMT-219ENST00000541899 NOL8Q76FK4 1167 aaKnown RBP18.08■□□□□ 0.48
LRTOMT-219ENST00000541899 RASGRP2Q7LDG7 609 aa18.08■□□□□ 0.48
LRTOMT-219ENST00000541899 PRPF38AQ8NAV1 312 aaKnown RBP18.08■□□□□ 0.48
LRTOMT-219ENST00000541899 SPZ1Q9BXG8 430 aa18.08■□□□□ 0.48
LRTOMT-219ENST00000541899 RIOX1Q9H6W3 641 aa18.08■□□□□ 0.48
LRTOMT-219ENST00000541899 GPCPD1Q9NPB8 672 aa18.08■□□□□ 0.48
LRTOMT-219ENST00000541899 TSHZ2Q9NRE2 1034 aa18.08■□□□□ 0.48
LRTOMT-219ENST00000541899 PNMA3Q9UL41 463 aa18.08■□□□□ 0.48
LRTOMT-219ENST00000541899 ADAMTS5Q9UNA0 930 aa18.08■□□□□ 0.48
LRTOMT-219ENST00000541899 K7ELQ4 463 aaPredicted RBP18.07■□□□□ 0.48
LRTOMT-219ENST00000541899 GOLGA8HP0CJ92 632 aa18.07■□□□□ 0.48
LRTOMT-219ENST00000541899 OSBPP22059 807 aa18.07■□□□□ 0.48
LRTOMT-219ENST00000541899 CCT2P78371 535 aaKnown RBP18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms