RNA–Protein interactions for RNA: ENST00000541615.5

SNHG1-218, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5 BASIC

Gene SNHG1, Length 748 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-218ENST00000541615 HNRNPCP07910 306 aaKnown RBP eCLIP5.77□□□□□ -1.49
SNHG1-218ENST00000541615 GHRP10912 638 aa5.77□□□□□ -1.49
SNHG1-218ENST00000541615 TOP1P11387 765 aaKnown RBP5.77□□□□□ -1.49
SNHG1-218ENST00000541615 CCND1P24385 295 aa5.77□□□□□ -1.49
SNHG1-218ENST00000541615 MAN1A1P33908 653 aa5.77□□□□□ -1.49
SNHG1-218ENST00000541615 HOXD12P35452 270 aa5.77□□□□□ -1.49
SNHG1-218ENST00000541615 MLH1P40692 756 aa5.77□□□□□ -1.49
SNHG1-218ENST00000541615 CTCFP49711 727 aaPredicted RBP5.77□□□□□ -1.49
SNHG1-218ENST00000541615 GNAQP50148 359 aa5.77□□□□□ -1.49
SNHG1-218ENST00000541615 INHBCP55103 352 aa5.77□□□□□ -1.49
SNHG1-218ENST00000541615 PIP4K2BP78356 416 aa5.77□□□□□ -1.49
SNHG1-218ENST00000541615 WASHC5Q12768 1159 aa5.77□□□□□ -1.49
SNHG1-218ENST00000541615 XRCC4Q13426 336 aa5.77□□□□□ -1.49
SNHG1-218ENST00000541615 SAFBQ15424 915 aaKnown RBP eCLIP5.77□□□□□ -1.49
SNHG1-218ENST00000541615 MAP3K11Q16584 847 aa5.77□□□□□ -1.49
SNHG1-218ENST00000541615 CFAP100Q494V2 611 aa5.77□□□□□ -1.49
SNHG1-218ENST00000541615 COBLL1Q53SF7 1204 aa5.77□□□□□ -1.49
SNHG1-218ENST00000541615 LMOD2Q6P5Q4 547 aa5.77□□□□□ -1.49
SNHG1-218ENST00000541615 PHLDB2Q86SQ0 1253 aa5.77□□□□□ -1.49
SNHG1-218ENST00000541615 DAAM2Q86T65 1068 aa5.77□□□□□ -1.49
SNHG1-218ENST00000541615 ZNF554Q86TJ5 538 aa5.77□□□□□ -1.49
SNHG1-218ENST00000541615 SAMD14Q8IZD0 417 aaPredicted RBP5.77□□□□□ -1.49
SNHG1-218ENST00000541615 FUKQ8N0W3 1084 aa5.77□□□□□ -1.49
SNHG1-218ENST00000541615 SLC43A3Q8NBI5 491 aa5.77□□□□□ -1.49
SNHG1-218ENST00000541615 NSUN7Q8NE18 718 aaKnown RBP5.77□□□□□ -1.49
SNHG1-218ENST00000541615 STKLD1Q8NE28 680 aa5.77□□□□□ -1.49
SNHG1-218ENST00000541615 NSMCE1Q8WV22 266 aa5.77□□□□□ -1.49
SNHG1-218ENST00000541615 MAML1Q92585 1016 aa5.77□□□□□ -1.49
SNHG1-218ENST00000541615 ITPKCQ96DU7 683 aa5.77□□□□□ -1.49
SNHG1-218ENST00000541615 VMP1Q96GC9 406 aa5.77□□□□□ -1.49
SNHG1-218ENST00000541615 RNPC3Q96LT9 517 aaKnown RBP5.77□□□□□ -1.49
SNHG1-218ENST00000541615 CCT7Q99832 543 aa5.77□□□□□ -1.49
SNHG1-218ENST00000541615 NAA15Q9BXJ9 866 aaKnown RBP5.77□□□□□ -1.49
SNHG1-218ENST00000541615 OXCT2Q9BYC2 517 aaPredicted RBP5.77□□□□□ -1.49
SNHG1-218ENST00000541615 DCTPP1Q9H773 170 aa5.77□□□□□ -1.49
SNHG1-218ENST00000541615 IL21Q9HBE4 155 aa5.77□□□□□ -1.49
SNHG1-218ENST00000541615 PARVGQ9HBI0 331 aa5.77□□□□□ -1.49
SNHG1-218ENST00000541615 AS3MTQ9HBK9 375 aa5.77□□□□□ -1.49
SNHG1-218ENST00000541615 GINM1Q9NU53 330 aa5.77□□□□□ -1.49
SNHG1-218ENST00000541615 ZBTB40Q9NUA8 1239 aa5.77□□□□□ -1.49
SNHG1-218ENST00000541615 SDAD1Q9NVU7 687 aaKnown RBP eCLIP5.77□□□□□ -1.49
SNHG1-218ENST00000541615 TRMT1Q9NXH9 659 aaKnown RBP5.77□□□□□ -1.49
SNHG1-218ENST00000541615 CABP1Q9NZU7 370 aa5.77□□□□□ -1.49
SNHG1-218ENST00000541615 LARSQ9P2J5 1176 aaKnown RBP5.77□□□□□ -1.49
SNHG1-218ENST00000541615 MYO1AQ9UBC5 1043 aa5.77□□□□□ -1.49
SNHG1-218ENST00000541615 GTF3C4Q9UKN8 822 aa5.77□□□□□ -1.49
SNHG1-218ENST00000541615 MTUS1Q9ULD2 1270 aa5.77□□□□□ -1.49
SNHG1-218ENST00000541615 TPCN1Q9ULQ1 816 aa5.77□□□□□ -1.49
SNHG1-218ENST00000541615 TTC7AQ9ULT0 858 aaPredicted RBP5.77□□□□□ -1.49
SNHG1-218ENST00000541615 ASB3Q9Y575 518 aa5.77□□□□□ -1.49
SNHG1-218ENST00000541615 SCINQ9Y6U3 715 aa5.77□□□□□ -1.49
SNHG1-218ENST00000541615 MYPNQ86TC9 1320 aa5.76□□□□□ -1.49
SNHG1-218ENST00000541615 ANKRD50Q9ULJ7 1429 aa5.76□□□□□ -1.49
SNHG1-218ENST00000541615 CCDC69A6NI79 296 aa5.76□□□□□ -1.49
SNHG1-218ENST00000541615 MYO1FO00160 1098 aa5.76□□□□□ -1.49
SNHG1-218ENST00000541615 BIN1O00499 593 aa5.76□□□□□ -1.49
SNHG1-218ENST00000541615 RNF40O75150 1001 aa5.76□□□□□ -1.49
SNHG1-218ENST00000541615 RAB11FIP3O75154 756 aa5.76□□□□□ -1.49
SNHG1-218ENST00000541615 CDC45O75419 566 aa5.76□□□□□ -1.49
SNHG1-218ENST00000541615 URI1O94763 535 aaPredicted RBP5.76□□□□□ -1.49
SNHG1-218ENST00000541615 SEC31AO94979 1220 aaKnown RBP5.76□□□□□ -1.49
SNHG1-218ENST00000541615 HSPA1AP0DMV8 641 aaKnown RBP5.76□□□□□ -1.49
SNHG1-218ENST00000541615 HSPA1BP0DMV9 641 aaKnown RBP5.76□□□□□ -1.49
SNHG1-218ENST00000541615 HSPA8P11142 646 aaKnown RBP5.76□□□□□ -1.49
SNHG1-218ENST00000541615 CD97P48960 835 aa5.76□□□□□ -1.49
SNHG1-218ENST00000541615 CLK1P49759 484 aaKnown RBP5.76□□□□□ -1.49
SNHG1-218ENST00000541615 SCNN1BP51168 640 aa5.76□□□□□ -1.49
SNHG1-218ENST00000541615 SKOR1P84550 965 aa5.76□□□□□ -1.49
SNHG1-218ENST00000541615 APBA1Q02410 837 aa5.76□□□□□ -1.49
SNHG1-218ENST00000541615 PPP2R3AQ06190 1150 aa5.76□□□□□ -1.49
SNHG1-218ENST00000541615 DMPKQ09013 629 aa5.76□□□□□ -1.49
SNHG1-218ENST00000541615 CASP8Q14790 479 aa5.76□□□□□ -1.49
SNHG1-218ENST00000541615 NONOQ15233 471 aaKnown RBP eCLIP5.76□□□□□ -1.49
SNHG1-218ENST00000541615 ADRM1Q16186 407 aa5.76□□□□□ -1.49
SNHG1-218ENST00000541615 NCAPH2Q6IBW4 605 aa5.76□□□□□ -1.49
SNHG1-218ENST00000541615 GRAMD4Q6IC98 578 aa5.76□□□□□ -1.49
SNHG1-218ENST00000541615 WDR93Q6P2C0 686 aa5.76□□□□□ -1.49
SNHG1-218ENST00000541615 USP48Q86UV5 1035 aa5.76□□□□□ -1.49
SNHG1-218ENST00000541615 NDUFAF2Q8N183 169 aa5.76□□□□□ -1.49
SNHG1-218ENST00000541615 CHCHD4Q8N4Q1 142 aa5.76□□□□□ -1.49
SNHG1-218ENST00000541615 CRACR2BQ8N4Y2 399 aaPredicted RBP5.76□□□□□ -1.49
SNHG1-218ENST00000541615 SCAIQ8N9R8 606 aa5.76□□□□□ -1.49
SNHG1-218ENST00000541615 SUN5Q8TC36 379 aa5.76□□□□□ -1.49
SNHG1-218ENST00000541615 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP5.76□□□□□ -1.496e-13■■□□□ 14.1
SNHG1-218ENST00000541615 APPBP2Q92624 585 aa5.76□□□□□ -1.49
SNHG1-218ENST00000541615 SNF8Q96H20 258 aa5.76□□□□□ -1.49
SNHG1-218ENST00000541615 PPP1R13BQ96KQ4 1090 aa5.76□□□□□ -1.49
SNHG1-218ENST00000541615 CATSPER2Q96P56 530 aa5.76□□□□□ -1.49
SNHG1-218ENST00000541615 MAP3K14Q99558 947 aa5.76□□□□□ -1.49
SNHG1-218ENST00000541615 HAUS7Q99871 368 aa5.76□□□□□ -1.49
SNHG1-218ENST00000541615 BPIFA3Q9BQP9 254 aa5.76□□□□□ -1.49
SNHG1-218ENST00000541615 CLK4Q9HAZ1 481 aaKnown RBP5.76□□□□□ -1.49
SNHG1-218ENST00000541615 DISC1Q9NRI5 854 aa5.76□□□□□ -1.49
SNHG1-218ENST00000541615 DDX19AQ9NUU7 478 aaKnown RBP5.76□□□□□ -1.49
SNHG1-218ENST00000541615 CFDP1Q9UEE9 299 aaPredicted RBP5.76□□□□□ -1.49
SNHG1-218ENST00000541615 SCAF8Q9UPN6 1271 aaKnown RBP5.76□□□□□ -1.49
SNHG1-218ENST00000541615 MAPK8IP1Q9UQF2 711 aa5.76□□□□□ -1.49
SNHG1-218ENST00000541615 PCDHB2Q9Y5E7 798 aa5.76□□□□□ -1.49
SNHG1-218ENST00000541615 SQORQ9Y6N5 450 aa5.76□□□□□ -1.49
SNHG1-218ENST00000541615 ERCC6Q03468 1493 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms