RNA–Protein interactions for RNA: ENST00000541315.1

BCKDHA-205, Transcript of branched chain keto acid dehydrogenase E1, alpha polypeptide, humanhuman

TSL 3

Gene BCKDHA, Length 632 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BCKDHA-205ENST00000541315 PHKBQ93100 1093 aa17.2■□□□□ 0.34
BCKDHA-205ENST00000541315 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.2■□□□□ 0.34
BCKDHA-205ENST00000541315 DDX49Q9Y6V7 483 aaKnown RBP17.2■□□□□ 0.34
BCKDHA-205ENST00000541315 FAM155AB1AL88 458 aaPredicted RBP17.19■□□□□ 0.34
BCKDHA-205ENST00000541315 PRPF40AO75400 957 aaKnown RBP17.19■□□□□ 0.34
BCKDHA-205ENST00000541315 ZNF157P51786 506 aaPredicted RBP17.19■□□□□ 0.34
BCKDHA-205ENST00000541315 FKBP1BP68106 108 aa17.19■□□□□ 0.34
BCKDHA-205ENST00000541315 ABCB5Q2M3G0 1257 aa17.19■□□□□ 0.34
BCKDHA-205ENST00000541315 KLHL40Q2TBA0 621 aa17.19■□□□□ 0.34
BCKDHA-205ENST00000541315 SAMD7Q7Z3H4 446 aa17.19■□□□□ 0.34
BCKDHA-205ENST00000541315 NBPF11Q86T75 865 aa17.19■□□□□ 0.34
BCKDHA-205ENST00000541315 FERMT3Q86UX7 667 aa17.19■□□□□ 0.34
BCKDHA-205ENST00000541315 APOBEC3FQ8IUX4 373 aaKnown RBP17.19■□□□□ 0.34
BCKDHA-205ENST00000541315 ZFPM1Q8IX07 1006 aa17.19■□□□□ 0.34
BCKDHA-205ENST00000541315 SYAP1Q96A49 352 aaPredicted RBP17.19■□□□□ 0.34
BCKDHA-205ENST00000541315 GINM1Q9NU53 330 aa17.19■□□□□ 0.34
BCKDHA-205ENST00000541315 NYAP2Q9P242 653 aa17.19■□□□□ 0.34
BCKDHA-205ENST00000541315 ELP1O95163 1332 aa17.19■□□□□ 0.34
BCKDHA-205ENST00000541315 KIF4BQ2VIQ3 1234 aa17.18■□□□□ 0.34
BCKDHA-205ENST00000541315 TBC1D10BQ4KMP7 808 aaPredicted RBP17.18■□□□□ 0.34
BCKDHA-205ENST00000541315 GPATCH4Q5T3I0 446 aaKnown RBP17.18■□□□□ 0.34
BCKDHA-205ENST00000541315 KRT40Q6A162 431 aa17.18■□□□□ 0.34
BCKDHA-205ENST00000541315 CTU1Q7Z7A3 348 aaKnown RBP17.18■□□□□ 0.34
BCKDHA-205ENST00000541315 CCDC12Q8WUD4 166 aaPredicted RBP17.18■□□□□ 0.34
BCKDHA-205ENST00000541315 LMBRD1Q9NUN5 540 aa17.18■□□□□ 0.34
BCKDHA-205ENST00000541315 CNTNAP5Q8WYK1 1306 aa17.18■□□□□ 0.34
BCKDHA-205ENST00000541315 PALM3A6NDB9 673 aaPredicted RBP17.17■□□□□ 0.34
BCKDHA-205ENST00000541315 GOLGA6L4A6NEF3 574 aa17.17■□□□□ 0.34
BCKDHA-205ENST00000541315 hCG_1984214I3L0E3 225 aa17.17■□□□□ 0.34
BCKDHA-205ENST00000541315 CALML3P27482 149 aa17.17■□□□□ 0.34
BCKDHA-205ENST00000541315 FOSBP53539 338 aa17.17■□□□□ 0.34
BCKDHA-205ENST00000541315 DNM1Q05193 864 aaKnown RBP17.17■□□□□ 0.34
BCKDHA-205ENST00000541315 SH3BP5LQ7L8J4 393 aa17.17■□□□□ 0.34
BCKDHA-205ENST00000541315 ZNF713Q8N859 430 aaPredicted RBP17.17■□□□□ 0.34
BCKDHA-205ENST00000541315 CCDC148Q8NFR7 591 aa17.17■□□□□ 0.34
BCKDHA-205ENST00000541315 SPZ1Q9BXG8 430 aa17.17■□□□□ 0.34
BCKDHA-205ENST00000541315 SH2D4AQ9H788 454 aa17.17■□□□□ 0.34
BCKDHA-205ENST00000541315 SH3GLB2Q9NR46 395 aa17.17■□□□□ 0.34
BCKDHA-205ENST00000541315 PPP2R3BQ9Y5P8 575 aa17.17■□□□□ 0.34
BCKDHA-205ENST00000541315 FIBPO43427 364 aa17.16■□□□□ 0.34
BCKDHA-205ENST00000541315 UBE2HP62256 183 aa17.16■□□□□ 0.34
BCKDHA-205ENST00000541315 KIF23Q02241 960 aaPredicted RBP17.16■□□□□ 0.34
BCKDHA-205ENST00000541315 ICA1Q05084 483 aa17.16■□□□□ 0.34
BCKDHA-205ENST00000541315 FUT2Q10981 343 aa17.16■□□□□ 0.34
BCKDHA-205ENST00000541315 GALNT17Q6IS24 598 aa17.16■□□□□ 0.34
BCKDHA-205ENST00000541315 MKL1Q969V6 931 aa17.16■□□□□ 0.34
BCKDHA-205ENST00000541315 SPATA32Q96LK8 384 aa17.16■□□□□ 0.34
BCKDHA-205ENST00000541315 FOXP1Q9H334 677 aaPredicted RBP17.16■□□□□ 0.34
BCKDHA-205ENST00000541315 ARHGEF10LQ9HCE6 1279 aa17.16■□□□□ 0.34
BCKDHA-205ENST00000541315 RNF186Q9NXI6 227 aa17.16■□□□□ 0.34
BCKDHA-205ENST00000541315 CLIP2Q9UDT6 1046 aa17.16■□□□□ 0.34
BCKDHA-205ENST00000541315 SEC63Q9UGP8 760 aaKnown RBP17.16■□□□□ 0.34
BCKDHA-205ENST00000541315 CNPY2Q9Y2B0 182 aa17.16■□□□□ 0.34
BCKDHA-205ENST00000541315 V9GY48 417 aaPredicted RBP17.16■□□□□ 0.34
BCKDHA-205ENST00000541315 KLRF2D3W0D1 207 aa17.15■□□□□ 0.34
BCKDHA-205ENST00000541315 PLEKHA8P1O95397 391 aa17.15■□□□□ 0.34
BCKDHA-205ENST00000541315 MMP1P03956 469 aa17.15■□□□□ 0.34
BCKDHA-205ENST00000541315 SCG2P13521 617 aa17.15■□□□□ 0.34
BCKDHA-205ENST00000541315 GUCY1B3Q02153 619 aa17.15■□□□□ 0.34
BCKDHA-205ENST00000541315 PFKFB3Q16875 520 aaPredicted RBP17.15■□□□□ 0.34
BCKDHA-205ENST00000541315 NBPF9Q3BBW0 867 aa17.15■□□□□ 0.34
BCKDHA-205ENST00000541315 FOXD4L6Q3SYB3 417 aaPredicted RBP17.15■□□□□ 0.34
BCKDHA-205ENST00000541315 DCAF15Q66K64 600 aa17.15■□□□□ 0.34
BCKDHA-205ENST00000541315 FOXD4L3Q6VB84 417 aaPredicted RBP17.15■□□□□ 0.34
BCKDHA-205ENST00000541315 CCDC82Q8N4S0 544 aa17.15■□□□□ 0.34
BCKDHA-205ENST00000541315 SRBD1Q8N5C6 995 aaKnown RBP17.15■□□□□ 0.34
BCKDHA-205ENST00000541315 DCAF4Q8WV16 495 aa17.15■□□□□ 0.34
BCKDHA-205ENST00000541315 RRP36Q96EU6 259 aaKnown RBP17.15■□□□□ 0.34
BCKDHA-205ENST00000541315 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.15■□□□□ 0.34
BCKDHA-205ENST00000541315 DNAJC18Q9H819 358 aa17.15■□□□□ 0.34
BCKDHA-205ENST00000541315 MAD2L2Q9UI95 211 aa17.15■□□□□ 0.34
BCKDHA-205ENST00000541315 TRPA1O75762 1119 aa17.14■□□□□ 0.33
BCKDHA-205ENST00000541315 ATP2B2Q01814 1243 aa17.14■□□□□ 0.33
BCKDHA-205ENST00000541315 PKN2Q16513 984 aaKnown RBP17.14■□□□□ 0.33
BCKDHA-205ENST00000541315 GREB1LQ9C091 1923 aaPredicted RBP17.13■□□□□ 0.33
BCKDHA-205ENST00000541315 SHTN1A0MZ66 631 aa17.13■□□□□ 0.33
BCKDHA-205ENST00000541315 PPFIA3O75145 1194 aa17.13■□□□□ 0.33
BCKDHA-205ENST00000541315 SLC10A3P09131 477 aa17.13■□□□□ 0.33
BCKDHA-205ENST00000541315 SNHG28P0DPA3 235 aa17.13■□□□□ 0.33
BCKDHA-205ENST00000541315 PDHBP11177 359 aa17.13■□□□□ 0.33
BCKDHA-205ENST00000541315 U2AF2P26368 475 aaKnown RBP eCLIP17.13■□□□□ 0.33
BCKDHA-205ENST00000541315 KRT2P35908 639 aa17.13■□□□□ 0.33
BCKDHA-205ENST00000541315 MAP3K10Q02779 954 aa17.13■□□□□ 0.33
BCKDHA-205ENST00000541315 RASA3Q14644 834 aa17.13■□□□□ 0.33
BCKDHA-205ENST00000541315 GMCL1P1Q8NEA9 526 aa17.13■□□□□ 0.33
BCKDHA-205ENST00000541315 GGA3Q9NZ52 723 aa17.13■□□□□ 0.33
BCKDHA-205ENST00000541315 PITPNM2Q9BZ72 1349 aa17.13■□□□□ 0.33
BCKDHA-205ENST00000541315 POLR2AP24928 1970 aaKnown RBP17.13■□□□□ 0.33
BCKDHA-205ENST00000541315 SIPA1L1O43166 1804 aa17.12■□□□□ 0.33
BCKDHA-205ENST00000541315 ADM5C9JUS6 153 aa17.12■□□□□ 0.33
BCKDHA-205ENST00000541315 DTNBO60941 627 aa17.12■□□□□ 0.33
BCKDHA-205ENST00000541315 YEATS4O95619 227 aa17.12■□□□□ 0.33
BCKDHA-205ENST00000541315 ASNSP08243 561 aa17.12■□□□□ 0.33
BCKDHA-205ENST00000541315 CCDC96Q2M329 555 aa17.12■□□□□ 0.33
BCKDHA-205ENST00000541315 MYSM1Q5VVJ2 828 aa17.12■□□□□ 0.33
BCKDHA-205ENST00000541315 DIS3L2Q8IYB7 885 aaKnown RBP17.12■□□□□ 0.33
BCKDHA-205ENST00000541315 LRRC47Q8N1G4 583 aaKnown RBP17.12■□□□□ 0.33
BCKDHA-205ENST00000541315 KCNG4Q8TDN1 519 aa17.12■□□□□ 0.33
BCKDHA-205ENST00000541315 GOPCQ9HD26 462 aa17.12■□□□□ 0.33
BCKDHA-205ENST00000541315 NOL7Q9UMY1 257 aaKnown RBP17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms