RNA–Protein interactions for RNA: ENST00000541286.5

SFSWAP-210, Transcript of splicing factor SWAP, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-210ENST00000541286 NAPBQ9H115 298 aa16.33■□□□□ 0.2
SFSWAP-210ENST00000541286 PLEKHA4Q9H4M7 779 aa16.33■□□□□ 0.2
SFSWAP-210ENST00000541286 HPS5Q9UPZ3 1129 aa16.33■□□□□ 0.2
SFSWAP-210ENST00000541286 MROH7-TTC4A0A0A0MT08 1334 aa16.32■□□□□ 0.2
SFSWAP-210ENST00000541286 NRDCO43847 1150 aa16.32■□□□□ 0.2
SFSWAP-210ENST00000541286 NMT2O60551 498 aa16.32■□□□□ 0.2
SFSWAP-210ENST00000541286 USP5P45974 858 aa16.32■□□□□ 0.2
SFSWAP-210ENST00000541286 CC2D2BQ6DHV5 1058 aa16.32■□□□□ 0.2
SFSWAP-210ENST00000541286 RSBN1LQ6PCB5 846 aaPredicted RBP16.32■□□□□ 0.2
SFSWAP-210ENST00000541286 TEX11Q8IYF3 940 aa16.32■□□□□ 0.2
SFSWAP-210ENST00000541286 CIAPIN1Q6FI81 312 aa16.32■□□□□ 0.2
SFSWAP-210ENST00000541286 MNS1Q8NEH6 495 aa16.32■□□□□ 0.2
SFSWAP-210ENST00000541286 SLC26A6Q9BXS9 759 aa16.32■□□□□ 0.2
SFSWAP-210ENST00000541286 ZFYP08048 801 aaPredicted RBP16.32■□□□□ 0.2
SFSWAP-210ENST00000541286 OAS2P29728 719 aaKnown RBP16.32■□□□□ 0.2
SFSWAP-210ENST00000541286 MICALL2Q8IY33 904 aa16.32■□□□□ 0.2
SFSWAP-210ENST00000541286 DCP1AQ9NPI6 582 aaPredicted RBP16.32■□□□□ 0.2
SFSWAP-210ENST00000541286 NEDD4P46934 1319 aa16.31■□□□□ 0.2
SFSWAP-210ENST00000541286 SALL1Q9NSC2 1324 aa16.31■□□□□ 0.2
SFSWAP-210ENST00000541286 DOCK2Q92608 1830 aa16.31■□□□□ 0.2
SFSWAP-210ENST00000541286 NEMFO60524 1076 aa16.31■□□□□ 0.2
SFSWAP-210ENST00000541286 CDC25BP30305 580 aa16.31■□□□□ 0.2
SFSWAP-210ENST00000541286 KIF23Q02241 960 aaPredicted RBP16.31■□□□□ 0.2
SFSWAP-210ENST00000541286 KRT40Q6A162 431 aa16.31■□□□□ 0.2
SFSWAP-210ENST00000541286 CPLX2Q6PUV4 134 aaKnown RBP16.31■□□□□ 0.2
SFSWAP-210ENST00000541286 CYB5R4Q7L1T6 521 aa16.31■□□□□ 0.2
SFSWAP-210ENST00000541286 NBPF11Q86T75 865 aa16.31■□□□□ 0.2
SFSWAP-210ENST00000541286 SUPT20HQ8NEM7 779 aa16.31■□□□□ 0.2
SFSWAP-210ENST00000541286 PPP1R13BQ96KQ4 1090 aa16.31■□□□□ 0.2
SFSWAP-210ENST00000541286 SASH3O75995 380 aa16.31■□□□□ 0.2
SFSWAP-210ENST00000541286 FAM47AQ5JRC9 791 aa16.31■□□□□ 0.2
SFSWAP-210ENST00000541286 MB21D2Q8IYB1 491 aaPredicted RBP16.31■□□□□ 0.2
SFSWAP-210ENST00000541286 TRPM4Q8TD43 1214 aa16.31■□□□□ 0.2
SFSWAP-210ENST00000541286 AGXT2Q9BYV1 514 aa16.31■□□□□ 0.2
SFSWAP-210ENST00000541286 UBASH3AP57075 661 aa16.3■□□□□ 0.2
SFSWAP-210ENST00000541286 FANCCQ00597 558 aa16.3■□□□□ 0.2
SFSWAP-210ENST00000541286 ZSCAN26Q16670 478 aa16.3■□□□□ 0.2
SFSWAP-210ENST00000541286 TEX35Q5T0J7 233 aa16.3■□□□□ 0.2
SFSWAP-210ENST00000541286 ARMCX5Q6P1M9 558 aa16.3■□□□□ 0.2
SFSWAP-210ENST00000541286 RASGRP2Q7LDG7 609 aa16.3■□□□□ 0.2
SFSWAP-210ENST00000541286 NUP133Q8WUM0 1156 aa16.3■□□□□ 0.2
SFSWAP-210ENST00000541286 GOLGA8AA7E2F4 631 aa16.3■□□□□ 0.2
SFSWAP-210ENST00000541286 CDC27P30260 824 aa16.3■□□□□ 0.2
SFSWAP-210ENST00000541286 FMR1Q06787 632 aaKnown RBP eCLIP16.3■□□□□ 0.2
SFSWAP-210ENST00000541286 TMEM67Q5HYA8 995 aa16.3■□□□□ 0.2
SFSWAP-210ENST00000541286 TEKT1Q969V4 418 aa16.3■□□□□ 0.2
SFSWAP-210ENST00000541286 VIL1P09327 827 aaKnown RBP16.3■□□□□ 0.2
SFSWAP-210ENST00000541286 POTEIP0CG38 1075 aa16.3■□□□□ 0.2
SFSWAP-210ENST00000541286 POTEJP0CG39 1038 aa16.3■□□□□ 0.2
SFSWAP-210ENST00000541286 LMNB1P20700 586 aa16.3■□□□□ 0.2
SFSWAP-210ENST00000541286 GSDMDP57764 484 aa16.3■□□□□ 0.2
SFSWAP-210ENST00000541286 CTR9Q6PD62 1173 aa16.3■□□□□ 0.2
SFSWAP-210ENST00000541286 CREBRFQ8IUR6 639 aa16.3■□□□□ 0.2
SFSWAP-210ENST00000541286 DPF2Q92785 391 aa16.3■□□□□ 0.2
SFSWAP-210ENST00000541286 ANGEL1Q9UNK9 670 aaKnown RBP16.3■□□□□ 0.2
SFSWAP-210ENST00000541286 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.3■□□□□ 0.23e-7■■■□□ 18.7
SFSWAP-210ENST00000541286 IFIT3O14879 490 aaKnown RBP16.29■□□□□ 0.2
SFSWAP-210ENST00000541286 ATL3Q6DD88 541 aa16.29■□□□□ 0.2
SFSWAP-210ENST00000541286 CNNM3Q8NE01 707 aa16.29■□□□□ 0.2
SFSWAP-210ENST00000541286 CNOT7Q9UIV1 285 aaKnown RBP16.29■□□□□ 0.2
SFSWAP-210ENST00000541286 KCNJ14Q9UNX9 436 aa16.29■□□□□ 0.2
SFSWAP-210ENST00000541286 BAZ2BQ9UIF8 2168 aaKnown RBP16.29■□□□□ 0.2
SFSWAP-210ENST00000541286 PATL2C9JE40 543 aaKnown RBP16.29■□□□□ 0.2
SFSWAP-210ENST00000541286 MYO1CO00159 1063 aa16.29■□□□□ 0.2
SFSWAP-210ENST00000541286 FOXN1O15353 648 aa16.29■□□□□ 0.2
SFSWAP-210ENST00000541286 H2AFXP16104 143 aaPredicted RBP16.29■□□□□ 0.2
SFSWAP-210ENST00000541286 PRKG1Q13976 671 aa16.29■□□□□ 0.2
SFSWAP-210ENST00000541286 SPTY2D1Q68D10 685 aaPredicted RBP16.29■□□□□ 0.2
SFSWAP-210ENST00000541286 ZSCAN29Q8IWY8 852 aaPredicted RBP16.29■□□□□ 0.2
SFSWAP-210ENST00000541286 GMLQ99445 158 aa16.29■□□□□ 0.2
SFSWAP-210ENST00000541286 RASSF4Q9H2L5 321 aa16.29■□□□□ 0.2
SFSWAP-210ENST00000541286 FAM53CQ9NYF3 392 aa16.29■□□□□ 0.2
SFSWAP-210ENST00000541286 LOC102724159A0A0B4J2E5 919 aa16.28■□□□□ 0.2
SFSWAP-210ENST00000541286 DDTLA6NHG4 134 aaPredicted RBP16.28■□□□□ 0.2
SFSWAP-210ENST00000541286 ZBTB43O43298 467 aa16.28■□□□□ 0.2
SFSWAP-210ENST00000541286 NLRP12P59046 1061 aa16.28■□□□□ 0.2
SFSWAP-210ENST00000541286 PWP2Q15269 919 aaKnown RBP16.28■□□□□ 0.2
SFSWAP-210ENST00000541286 MIGA2Q7L4E1 593 aa16.28■□□□□ 0.2
SFSWAP-210ENST00000541286 GPATCH11Q8N954 259 aa16.28■□□□□ 0.2
SFSWAP-210ENST00000541286 POLR3EQ9NVU0 708 aa16.28■□□□□ 0.2
SFSWAP-210ENST00000541286 RFX7Q2KHR2 1363 aa16.28■□□□□ 0.2
SFSWAP-210ENST00000541286 PHACTR2O75167 634 aa16.28■□□□□ 0.2
SFSWAP-210ENST00000541286 YEATS4O95619 227 aa16.28■□□□□ 0.2
SFSWAP-210ENST00000541286 FOXR1Q6PIV2 292 aa16.28■□□□□ 0.2
SFSWAP-210ENST00000541286 BRAPQ7Z569 592 aa16.28■□□□□ 0.2
SFSWAP-210ENST00000541286 CCDC84Q86UT8 332 aaPredicted RBP16.28■□□□□ 0.2
SFSWAP-210ENST00000541286 TBC1D22AQ8WUA7 517 aa16.28■□□□□ 0.2
SFSWAP-210ENST00000541286 TMEM39BQ9GZU3 492 aa16.28■□□□□ 0.2
SFSWAP-210ENST00000541286 A0A1W2PQ27 194 aa16.28■□□□□ 0.2
SFSWAP-210ENST00000541286 A0A1W2PQ64 194 aa16.28■□□□□ 0.2
SFSWAP-210ENST00000541286 A0A1W2PQD8 194 aa16.28■□□□□ 0.2
SFSWAP-210ENST00000541286 GPR75-ASB3A0A0A6YYF3 556 aa16.27■□□□□ 0.2
SFSWAP-210ENST00000541286 hCG_1642624A0A1W2PR95 340 aa16.27■□□□□ 0.2
SFSWAP-210ENST00000541286 FZD9O00144 591 aa16.27■□□□□ 0.2
SFSWAP-210ENST00000541286 WNT10BO00744 389 aa16.27■□□□□ 0.2
SFSWAP-210ENST00000541286 EIF6P56537 245 aaKnown RBP16.27■□□□□ 0.2
SFSWAP-210ENST00000541286 SOGA3Q5TF21 947 aa16.27■□□□□ 0.2
SFSWAP-210ENST00000541286 WWC2Q6AWC2 1192 aa16.27■□□□□ 0.2
SFSWAP-210ENST00000541286 TRMT44Q8IYL2 757 aaKnown RBP16.27■□□□□ 0.2
SFSWAP-210ENST00000541286 FLT1P17948 1338 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms