RNA–Protein interactions for RNA: ENST00000541169.1

VPS33A-205, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-205ENST00000541169 DGKZQ13574 1117 aa22.01■■□□□ 1.11
VPS33A-205ENST00000541169 WTAPQ15007 396 aa22.01■■□□□ 1.11
VPS33A-205ENST00000541169 SEC23AQ15436 765 aa22.01■■□□□ 1.11
VPS33A-205ENST00000541169 GPATCH4Q5T3I0 446 aaKnown RBP22.01■■□□□ 1.11
VPS33A-205ENST00000541169 CYB5R4Q7L1T6 521 aa22.01■■□□□ 1.11
VPS33A-205ENST00000541169 DHX32Q7L7V1 743 aaKnown RBP22.01■■□□□ 1.11
VPS33A-205ENST00000541169 FAM160B2Q86V87 743 aa22.01■■□□□ 1.11
VPS33A-205ENST00000541169 PRPF38AQ8NAV1 312 aaKnown RBP22.01■■□□□ 1.11
VPS33A-205ENST00000541169 P2RX7Q99572 595 aaKnown RBP22.01■■□□□ 1.11
VPS33A-205ENST00000541169 ZKSCAN3Q9BRR0 538 aa22.01■■□□□ 1.11
VPS33A-205ENST00000541169 MORF4L1Q9UBU8 362 aa22.01■■□□□ 1.11
VPS33A-205ENST00000541169 PRC1O43663 620 aa22■■□□□ 1.11
VPS33A-205ENST00000541169 BCRP11274 1271 aa22■■□□□ 1.11
VPS33A-205ENST00000541169 CCNA1P78396 465 aa22■■□□□ 1.11
VPS33A-205ENST00000541169 TMEM67Q5HYA8 995 aa22■■□□□ 1.11
VPS33A-205ENST00000541169 KIAA1755Q5JYT7 1200 aa22■■□□□ 1.11
VPS33A-205ENST00000541169 FAM83BQ5T0W9 1011 aa22■■□□□ 1.11
VPS33A-205ENST00000541169 PNMA1Q8ND90 353 aa22■■□□□ 1.11
VPS33A-205ENST00000541169 TAF6LQ9Y6J9 622 aa22■■□□□ 1.11
VPS33A-205ENST00000541169 PCNTO95613 3336 aa22■■□□□ 1.11
VPS33A-205ENST00000541169 DSG3P32926 999 aa21.99■■□□□ 1.11
VPS33A-205ENST00000541169 LIFRP42702 1097 aa21.99■■□□□ 1.11
VPS33A-205ENST00000541169 STAT2P52630 851 aa21.99■■□□□ 1.11
VPS33A-205ENST00000541169 RASEFQ8IZ41 740 aa21.99■■□□□ 1.11
VPS33A-205ENST00000541169 GPRC5AQ8NFJ5 357 aa21.99■■□□□ 1.11
VPS33A-205ENST00000541169 ZNF296Q8WUU4 475 aaPredicted RBP21.99■■□□□ 1.11
VPS33A-205ENST00000541169 SLF1Q9BQI6 1058 aa21.99■■□□□ 1.11
VPS33A-205ENST00000541169 PPP1R9AQ9ULJ8 1098 aa21.99■■□□□ 1.11
VPS33A-205ENST00000541169 ADAMTS5Q9UNA0 930 aa21.99■■□□□ 1.11
VPS33A-205ENST00000541169 SNX14Q9Y5W7 946 aa21.99■■□□□ 1.11
VPS33A-205ENST00000541169 SPDYE16A6NNV3 312 aaPredicted RBP21.98■■□□□ 1.11
VPS33A-205ENST00000541169 SNHG28P0DPA3 235 aa21.98■■□□□ 1.11
VPS33A-205ENST00000541169 C8orf34Q49A92 452 aa21.98■■□□□ 1.11
VPS33A-205ENST00000541169 BLOC1S2Q6QNY1 142 aa21.98■■□□□ 1.11
VPS33A-205ENST00000541169 IGDCC4Q8TDY8 1250 aa21.98■■□□□ 1.11
VPS33A-205ENST00000541169 TM6SF1Q9BZW5 370 aa21.98■■□□□ 1.11
VPS33A-205ENST00000541169 CPA4Q9UI42 421 aa21.98■■□□□ 1.11
VPS33A-205ENST00000541169 TSKSQ9UJT2 592 aa21.98■■□□□ 1.11
VPS33A-205ENST00000541169 PNMA2Q9UL42 364 aa21.98■■□□□ 1.11
VPS33A-205ENST00000541169 PDHBP11177 359 aa21.97■■□□□ 1.11
VPS33A-205ENST00000541169 COPB2P35606 906 aa21.97■■□□□ 1.11
VPS33A-205ENST00000541169 LACTBP83111 547 aaPredicted RBP21.97■■□□□ 1.11
VPS33A-205ENST00000541169 ASPRV1Q53RT3 343 aa21.97■■□□□ 1.11
VPS33A-205ENST00000541169 CATIPQ7Z7H3 387 aa21.97■■□□□ 1.11
VPS33A-205ENST00000541169 FBXL16Q8N461 479 aa21.97■■□□□ 1.11
VPS33A-205ENST00000541169 ANKRD13CQ8N6S4 541 aa21.97■■□□□ 1.11
VPS33A-205ENST00000541169 MAP3K14Q99558 947 aa21.97■■□□□ 1.11
VPS33A-205ENST00000541169 R3HDMLQ9H3Y0 253 aa21.97■■□□□ 1.11
VPS33A-205ENST00000541169 UPF2Q9HAU5 1272 aaKnown RBP21.97■■□□□ 1.11
VPS33A-205ENST00000541169 CALM1P0DP23 149 aa21.96■■□□□ 1.11
VPS33A-205ENST00000541169 CALM2P0DP24 149 aa21.96■■□□□ 1.11
VPS33A-205ENST00000541169 CALM3P0DP25 149 aa21.96■■□□□ 1.11
VPS33A-205ENST00000541169 PRMT2P55345 433 aa21.96■■□□□ 1.11
VPS33A-205ENST00000541169 ANTXR2P58335 489 aa21.96■■□□□ 1.11
VPS33A-205ENST00000541169 EXOSC10Q01780 885 aaKnown RBP21.96■■□□□ 1.11
VPS33A-205ENST00000541169 PKN2Q16513 984 aaKnown RBP21.96■■□□□ 1.11
VPS33A-205ENST00000541169 IL27Q8NEV9 243 aa21.96■■□□□ 1.11
VPS33A-205ENST00000541169 NKX2-3Q8TAU0 364 aa21.96■■□□□ 1.11
VPS33A-205ENST00000541169 JAKMIP1Q96N16 626 aaKnown RBP21.96■■□□□ 1.11
VPS33A-205ENST00000541169 RBPJLQ9UBG7 517 aa21.96■■□□□ 1.11
VPS33A-205ENST00000541169 PARP14Q460N5 1801 aa21.96■■□□□ 1.11
VPS33A-205ENST00000541169 TMEM232C9JQI7 657 aa21.95■■□□□ 1.1
VPS33A-205ENST00000541169 HOXD10P28358 340 aa21.95■■□□□ 1.1
VPS33A-205ENST00000541169 OAZ1P54368 228 aa21.95■■□□□ 1.1
VPS33A-205ENST00000541169 FCGRTP55899 365 aa21.95■■□□□ 1.1
VPS33A-205ENST00000541169 ZNF543Q08ER8 600 aa21.95■■□□□ 1.1
VPS33A-205ENST00000541169 IKQ13123 557 aaPredicted RBP21.95■■□□□ 1.1
VPS33A-205ENST00000541169 CCDC96Q2M329 555 aa21.95■■□□□ 1.1
VPS33A-205ENST00000541169 BTNL9Q6UXG8 535 aa21.95■■□□□ 1.1
VPS33A-205ENST00000541169 SGMS1Q86VZ5 419 aa21.95■■□□□ 1.1
VPS33A-205ENST00000541169 IL17RAQ96F46 866 aa21.95■■□□□ 1.1
VPS33A-205ENST00000541169 ISY1Q9ULR0 285 aaKnown RBP21.95■■□□□ 1.1
VPS33A-205ENST00000541169 CTDP1Q9Y5B0 961 aaPredicted RBP21.95■■□□□ 1.1
VPS33A-205ENST00000541169 RLFQ13129 1914 aa21.94■■□□□ 1.1
VPS33A-205ENST00000541169 CCDC69A6NI79 296 aa21.94■■□□□ 1.1
VPS33A-205ENST00000541169 VWA5AO00534 786 aa21.94■■□□□ 1.1
VPS33A-205ENST00000541169 ZBED4O75132 1171 aa21.94■■□□□ 1.1
VPS33A-205ENST00000541169 DDAH1O94760 285 aa21.94■■□□□ 1.1
VPS33A-205ENST00000541169 PARP1P09874 1014 aaKnown RBP21.94■■□□□ 1.1
VPS33A-205ENST00000541169 MAPK4P31152 587 aa21.94■■□□□ 1.1
VPS33A-205ENST00000541169 ERVK-9P63128 1117 aa21.94■■□□□ 1.1
VPS33A-205ENST00000541169 ERVK-24P63145 666 aa21.94■■□□□ 1.1
VPS33A-205ENST00000541169 FGD1P98174 961 aa21.94■■□□□ 1.1
VPS33A-205ENST00000541169 ADCK5Q3MIX3 580 aa21.94■■□□□ 1.1
VPS33A-205ENST00000541169 SYNE3Q6ZMZ3 975 aa21.94■■□□□ 1.1
VPS33A-205ENST00000541169 CCAR1Q8IX12 1150 aaKnown RBP21.94■■□□□ 1.1
VPS33A-205ENST00000541169 NUP88Q99567 741 aaPredicted RBP21.94■■□□□ 1.1
VPS33A-205ENST00000541169 LY9Q9HBG7 655 aa21.94■■□□□ 1.1
VPS33A-205ENST00000541169 CYP46A1Q9Y6A2 500 aa21.94■■□□□ 1.1
VPS33A-205ENST00000541169 A0A0G2JMZ2 1700 aa21.94■■□□□ 1.1
VPS33A-205ENST00000541169 SH2B2O14492 632 aaPredicted RBP21.93■■□□□ 1.1
VPS33A-205ENST00000541169 ATP2A1O14983 1001 aa21.93■■□□□ 1.1
VPS33A-205ENST00000541169 SLC25A27O95847 323 aa21.93■■□□□ 1.1
VPS33A-205ENST00000541169 KIF5BP33176 963 aa21.93■■□□□ 1.1
VPS33A-205ENST00000541169 RCAN1P53805 252 aa21.93■■□□□ 1.1
VPS33A-205ENST00000541169 NFXL1Q6ZNB6 911 aa21.93■■□□□ 1.1
VPS33A-205ENST00000541169 CHST3Q7LGC8 479 aa21.93■■□□□ 1.1
VPS33A-205ENST00000541169 SHCBP1Q8NEM2 672 aa21.93■■□□□ 1.1
VPS33A-205ENST00000541169 ZSWIM6Q9HCJ5 1215 aa21.93■■□□□ 1.1
VPS33A-205ENST00000541169 CASTP20810 708 aaKnown RBP21.92■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms