RNA–Protein interactions for RNA: ENST00000540998.5

CDC42SE1-207, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDC42SE1, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-207ENST00000540998 NACAP1Q9BZK3 213 aa11.7□□□□□ -0.54
CDC42SE1-207ENST00000540998 FBXO3Q9UK99 471 aa11.7□□□□□ -0.54
CDC42SE1-207ENST00000540998 LRP6O75581 1613 aa11.7□□□□□ -0.54
CDC42SE1-207ENST00000540998 IFIT1BQ5T764 474 aaKnown RBP11.7□□□□□ -0.54
CDC42SE1-207ENST00000540998 ZNF579Q8NAF0 562 aaKnown RBP11.7□□□□□ -0.54
CDC42SE1-207ENST00000540998 LRRC15Q8TF66 581 aa11.7□□□□□ -0.54
CDC42SE1-207ENST00000540998 AK7Q96M32 723 aa11.7□□□□□ -0.54
CDC42SE1-207ENST00000540998 EHD4Q9H223 541 aa11.7□□□□□ -0.54
CDC42SE1-207ENST00000540998 FAM204AQ9H8W3 233 aa11.7□□□□□ -0.54
CDC42SE1-207ENST00000540998 MYO6Q9UM54 1294 aa11.7□□□□□ -0.54
CDC42SE1-207ENST00000540998 RRP15Q9Y3B9 282 aaKnown RBP11.7□□□□□ -0.54
CDC42SE1-207ENST00000540998 CYP19A1P11511 503 aaPredicted RBP11.69□□□□□ -0.54
CDC42SE1-207ENST00000540998 KLRK1P26718 216 aa11.69□□□□□ -0.54
CDC42SE1-207ENST00000540998 HSPA2P54652 639 aa11.69□□□□□ -0.54
CDC42SE1-207ENST00000540998 IRF2BP1Q8IU81 584 aa11.69□□□□□ -0.54
CDC42SE1-207ENST00000540998 LACRTQ9GZZ8 138 aa11.69□□□□□ -0.54
CDC42SE1-207ENST00000540998 CPVLQ9H3G5 476 aa11.69□□□□□ -0.54
CDC42SE1-207ENST00000540998 AGPAT5Q9NUQ2 364 aa11.69□□□□□ -0.54
CDC42SE1-207ENST00000540998 FAM205AQ6ZU69 1335 aa11.69□□□□□ -0.54
CDC42SE1-207ENST00000540998 ATP8B1O43520 1251 aa11.69□□□□□ -0.54
CDC42SE1-207ENST00000540998 MYO1BO43795 1136 aa11.69□□□□□ -0.54
CDC42SE1-207ENST00000540998 ACTN2P35609 894 aa11.69□□□□□ -0.54
CDC42SE1-207ENST00000540998 EZH2Q15910 746 aaKnown RBP11.69□□□□□ -0.54
CDC42SE1-207ENST00000540998 TCP11X2Q5H9J9 407 aa11.69□□□□□ -0.54
CDC42SE1-207ENST00000540998 TTC19Q6DKK2 380 aaPredicted RBP11.69□□□□□ -0.54
CDC42SE1-207ENST00000540998 TICAM2Q86XR7 235 aa11.69□□□□□ -0.54
CDC42SE1-207ENST00000540998 CNGA4Q8IV77 575 aa11.69□□□□□ -0.54
CDC42SE1-207ENST00000540998 CCDC24Q8N4L8 307 aa11.69□□□□□ -0.54
CDC42SE1-207ENST00000540998 CEP112Q8N8E3 955 aa11.69□□□□□ -0.54
CDC42SE1-207ENST00000540998 MSANTD4Q8NCY6 345 aa11.69□□□□□ -0.54
CDC42SE1-207ENST00000540998 ZNF384Q8TF68 577 aa11.69□□□□□ -0.54
CDC42SE1-207ENST00000540998 EHD2Q9NZN4 543 aa11.69□□□□□ -0.54
CDC42SE1-207ENST00000540998 RAB21Q9UL25 225 aa11.69□□□□□ -0.54
CDC42SE1-207ENST00000540998 CEP131Q9UPN4 1083 aa11.69□□□□□ -0.54
CDC42SE1-207ENST00000540998 TNS2Q63HR2 1409 aa11.69□□□□□ -0.54
CDC42SE1-207ENST00000540998 MACROD2A1Z1Q3 448 aa11.69□□□□□ -0.54
CDC42SE1-207ENST00000540998 HERVK_113P62684 666 aa11.69□□□□□ -0.54
CDC42SE1-207ENST00000540998 E2F4Q16254 413 aa11.69□□□□□ -0.54
CDC42SE1-207ENST00000540998 PDXDC2PQ6P474 469 aa11.69□□□□□ -0.54
CDC42SE1-207ENST00000540998 EXOC4Q96A65 974 aa11.69□□□□□ -0.54
CDC42SE1-207ENST00000540998 ZSCAN10Q96SZ4 725 aaPredicted RBP11.69□□□□□ -0.54
CDC42SE1-207ENST00000540998 TOGARAM1Q9Y4F4 1720 aa11.69□□□□□ -0.54
CDC42SE1-207ENST00000540998 TAF1P21675 1872 aa11.68□□□□□ -0.54
CDC42SE1-207ENST00000540998 PDE2AO00408 941 aaPredicted RBP11.68□□□□□ -0.54
CDC42SE1-207ENST00000540998 AMPD2Q01433 879 aa11.68□□□□□ -0.54
CDC42SE1-207ENST00000540998 PAK1Q13153 545 aa11.68□□□□□ -0.54
CDC42SE1-207ENST00000540998 NKX1-1Q15270 411 aaPredicted RBP11.68□□□□□ -0.54
CDC42SE1-207ENST00000540998 KANK3Q6NY19 840 aa11.68□□□□□ -0.54
CDC42SE1-207ENST00000540998 C3orf67Q6ZVT6 689 aa11.68□□□□□ -0.54
CDC42SE1-207ENST00000540998 BRINP3Q76B58 766 aa11.68□□□□□ -0.54
CDC42SE1-207ENST00000540998 KRT26Q7Z3Y9 468 aa11.68□□□□□ -0.54
CDC42SE1-207ENST00000540998 RASSF8Q8NHQ8 419 aa11.68□□□□□ -0.54
CDC42SE1-207ENST00000540998 GNL3LQ9NVN8 582 aaKnown RBP11.68□□□□□ -0.54
CDC42SE1-207ENST00000540998 B4DLN1 442 aa11.68□□□□□ -0.54
CDC42SE1-207ENST00000540998 USP17L12C9JPN9 530 aa11.68□□□□□ -0.54
CDC42SE1-207ENST00000540998 USP17L21D6R901 530 aa11.68□□□□□ -0.54
CDC42SE1-207ENST00000540998 NDUFA10O95299 355 aa11.68□□□□□ -0.54
CDC42SE1-207ENST00000540998 PLEKP08567 350 aaPredicted RBP11.68□□□□□ -0.54
CDC42SE1-207ENST00000540998 KCNQ4P56696 695 aa11.68□□□□□ -0.54
CDC42SE1-207ENST00000540998 NLRP5P59047 1200 aa11.68□□□□□ -0.54
CDC42SE1-207ENST00000540998 MUM1L1Q5H9M0 696 aa11.68□□□□□ -0.54
CDC42SE1-207ENST00000540998 SRLQ86TD4 932 aa11.68□□□□□ -0.54
CDC42SE1-207ENST00000540998 ZNF512BQ96KM6 892 aaPredicted RBP11.68□□□□□ -0.54
CDC42SE1-207ENST00000540998 GSDMAQ96QA5 445 aa11.68□□□□□ -0.54
CDC42SE1-207ENST00000540998 EPN1Q9Y6I3 576 aaPredicted RBP11.68□□□□□ -0.54
CDC42SE1-207ENST00000540998 CDHR2Q9BYE9 1310 aa11.68□□□□□ -0.54
CDC42SE1-207ENST00000540998 COL5A2P05997 1499 aaPredicted RBP11.68□□□□□ -0.54
CDC42SE1-207ENST00000540998 MYH13Q9UKX3 1938 aa11.68□□□□□ -0.54
CDC42SE1-207ENST00000540998 MAGEB6P1A0A0J9YX57 407 aa11.67□□□□□ -0.54
CDC42SE1-207ENST00000540998 CCDC196A0A1B0GTZ2 297 aa11.67□□□□□ -0.54
CDC42SE1-207ENST00000540998 MATR3P43243 847 aaKnown RBP eCLIP11.67□□□□□ -0.544e-6■■□□□ 11.7
CDC42SE1-207ENST00000540998 CHRNDQ07001 517 aa11.67□□□□□ -0.54
CDC42SE1-207ENST00000540998 C2orf54Q08AI8 447 aa11.67□□□□□ -0.54
CDC42SE1-207ENST00000540998 TROAPQ12815 778 aa11.67□□□□□ -0.54
CDC42SE1-207ENST00000540998 CCDC122Q5T0U0 273 aa11.67□□□□□ -0.54
CDC42SE1-207ENST00000540998 WDR59Q6PJI9 974 aa11.67□□□□□ -0.54
CDC42SE1-207ENST00000540998 GOLGA5Q8TBA6 731 aa11.67□□□□□ -0.54
CDC42SE1-207ENST00000540998 ESR2Q92731 530 aa11.67□□□□□ -0.54
CDC42SE1-207ENST00000540998 TNFRSF25Q93038 417 aa11.67□□□□□ -0.54
CDC42SE1-207ENST00000540998 RNF26Q9BY78 433 aaPredicted RBP11.67□□□□□ -0.54
CDC42SE1-207ENST00000540998 RNF40O75150 1001 aa11.67□□□□□ -0.54
CDC42SE1-207ENST00000540998 RPN1P04843 607 aaKnown RBP11.67□□□□□ -0.54
CDC42SE1-207ENST00000540998 PARP1P09874 1014 aaKnown RBP11.67□□□□□ -0.54
CDC42SE1-207ENST00000540998 DNAJC21Q5F1R6 531 aaKnown RBP11.67□□□□□ -0.54
CDC42SE1-207ENST00000540998 TYW1BQ6NUM6 668 aa11.67□□□□□ -0.54
CDC42SE1-207ENST00000540998 CYP26C1Q6V0L0 522 aa11.67□□□□□ -0.54
CDC42SE1-207ENST00000540998 HDAC7Q8WUI4 952 aa11.67□□□□□ -0.54
CDC42SE1-207ENST00000540998 CXCR5P32302 372 aa11.67□□□□□ -0.54
CDC42SE1-207ENST00000540998 USP5P45974 858 aa11.67□□□□□ -0.54
CDC42SE1-207ENST00000540998 ATP2B2Q01814 1243 aa11.67□□□□□ -0.54
CDC42SE1-207ENST00000540998 LRRC31Q6UY01 552 aa11.67□□□□□ -0.54
CDC42SE1-207ENST00000540998 CATIPQ7Z7H3 387 aa11.67□□□□□ -0.54
CDC42SE1-207ENST00000540998 TMEM60Q9H2L4 133 aa11.67□□□□□ -0.54
CDC42SE1-207ENST00000540998 TTF2Q9UNY4 1162 aaKnown RBP11.67□□□□□ -0.54
CDC42SE1-207ENST00000540998 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.66□□□□□ -0.54
CDC42SE1-207ENST00000540998 DNA2P51530 1060 aa11.66□□□□□ -0.54
CDC42SE1-207ENST00000540998 LEKR1Q6ZMV7 388 aa11.66□□□□□ -0.54
CDC42SE1-207ENST00000540998 TMTC1Q8IUR5 882 aa11.66□□□□□ -0.54
CDC42SE1-207ENST00000540998 ACSBG1Q96GR2 724 aa11.66□□□□□ -0.54
CDC42SE1-207ENST00000540998 NAA15Q9BXJ9 866 aaKnown RBP11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms