RNA–Protein interactions for RNA: ENST00000540804.5

MSRB3-209, Transcript of methionine sulfoxide reductase B3, humanhuman

TSL 2 BASIC

Gene MSRB3, Length 884 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-209ENST00000540804 A0A0G2JMZ2 1700 aa17.32■□□□□ 0.36
MSRB3-209ENST00000540804 ROBO3Q96MS0 1386 aa17.31■□□□□ 0.36
MSRB3-209ENST00000540804 PATL2C9JE40 543 aaKnown RBP17.31■□□□□ 0.36
MSRB3-209ENST00000540804 COL6A1P12109 1028 aa17.31■□□□□ 0.36
MSRB3-209ENST00000540804 MX1P20591 662 aa17.31■□□□□ 0.36
MSRB3-209ENST00000540804 MB21D1Q8N884 522 aa17.31■□□□□ 0.36
MSRB3-209ENST00000540804 SHCBP1Q8NEM2 672 aa17.31■□□□□ 0.36
MSRB3-209ENST00000540804 CLIP2Q9UDT6 1046 aa17.31■□□□□ 0.36
MSRB3-209ENST00000540804 DDX20Q9UHI6 824 aaKnown RBP17.31■□□□□ 0.36
MSRB3-209ENST00000540804 ADAMTS5Q9UNA0 930 aa17.31■□□□□ 0.36
MSRB3-209ENST00000540804 ALPK3Q96L96 1907 aa17.31■□□□□ 0.36
MSRB3-209ENST00000540804 RANBP2P49792 3224 aaKnown RBP17.3■□□□□ 0.36
MSRB3-209ENST00000540804 IGKV6D-41A0A0C4DH26 115 aa17.3■□□□□ 0.36
MSRB3-209ENST00000540804 ERC2O15083 957 aa17.3■□□□□ 0.36
MSRB3-209ENST00000540804 PGK2P07205 417 aa17.3■□□□□ 0.36
MSRB3-209ENST00000540804 LRRC26Q2I0M4 334 aa17.3■□□□□ 0.36
MSRB3-209ENST00000540804 ZMYM1Q5SVZ6 1142 aa17.3■□□□□ 0.36
MSRB3-209ENST00000540804 CHMP4CQ96CF2 233 aa17.3■□□□□ 0.36
MSRB3-209ENST00000540804 GOPCQ9HD26 462 aa17.3■□□□□ 0.36
MSRB3-209ENST00000540804 INCENPQ9NQS7 918 aa17.3■□□□□ 0.36
MSRB3-209ENST00000540804 PPP1R9AQ9ULJ8 1098 aa17.3■□□□□ 0.36
MSRB3-209ENST00000540804 SZT2Q5T011 3432 aa17.29■□□□□ 0.36
MSRB3-209ENST00000540804 F5H6K3 240 aa17.29■□□□□ 0.36
MSRB3-209ENST00000540804 VWA5AO00534 786 aa17.29■□□□□ 0.36
MSRB3-209ENST00000540804 FOXP2O15409 715 aa17.29■□□□□ 0.36
MSRB3-209ENST00000540804 STRNO43815 780 aa17.29■□□□□ 0.36
MSRB3-209ENST00000540804 NDUFB10O96000 172 aa17.29■□□□□ 0.36
MSRB3-209ENST00000540804 CYBAP13498 195 aa17.29■□□□□ 0.36
MSRB3-209ENST00000540804 GNAT2P19087 354 aa17.29■□□□□ 0.36
MSRB3-209ENST00000540804 KLRC3Q07444 240 aa17.29■□□□□ 0.36
MSRB3-209ENST00000540804 FAM47AQ5JRC9 791 aa17.29■□□□□ 0.36
MSRB3-209ENST00000540804 REPS2Q8NFH8 660 aa17.29■□□□□ 0.36
MSRB3-209ENST00000540804 MROH8Q9H579 483 aa17.29■□□□□ 0.36
MSRB3-209ENST00000540804 NYAP2Q9P242 653 aa17.29■□□□□ 0.36
MSRB3-209ENST00000540804 SOX1O00570 391 aaPredicted RBP17.28■□□□□ 0.36
MSRB3-209ENST00000540804 VPS53Q5VIR6 699 aa17.28■□□□□ 0.36
MSRB3-209ENST00000540804 ZNF444Q8N0Y2 327 aaPredicted RBP17.28■□□□□ 0.36
MSRB3-209ENST00000540804 LRRC47Q8N1G4 583 aaKnown RBP17.28■□□□□ 0.36
MSRB3-209ENST00000540804 CEP95Q96GE4 821 aa17.28■□□□□ 0.36
MSRB3-209ENST00000540804 MAML3Q96JK9 1138 aa17.28■□□□□ 0.36
MSRB3-209ENST00000540804 SENP6Q9GZR1 1112 aaPredicted RBP17.28■□□□□ 0.36
MSRB3-209ENST00000540804 ZNF214Q9UL59 606 aaPredicted RBP17.28■□□□□ 0.36
MSRB3-209ENST00000540804 TACC3Q9Y6A5 838 aa17.28■□□□□ 0.36
MSRB3-209ENST00000540804 MYH8P13535 1937 aa17.27■□□□□ 0.36
MSRB3-209ENST00000540804 FCER1AP12319 257 aa17.27■□□□□ 0.36
MSRB3-209ENST00000540804 STAT3P40763 770 aa17.27■□□□□ 0.36
MSRB3-209ENST00000540804 SLC4A3P48751 1232 aa17.27■□□□□ 0.36
MSRB3-209ENST00000540804 ATN1P54259 1190 aaPredicted RBP17.27■□□□□ 0.36
MSRB3-209ENST00000540804 GJC2Q5T442 439 aaPredicted RBP17.27■□□□□ 0.36
MSRB3-209ENST00000540804 OLFML2BQ68BL8 750 aa17.27■□□□□ 0.36
MSRB3-209ENST00000540804 RIOX2Q8IUF8 465 aa17.27■□□□□ 0.36
MSRB3-209ENST00000540804 MMP19Q99542 508 aa17.27■□□□□ 0.36
MSRB3-209ENST00000540804 GDF15Q99988 308 aa17.27■□□□□ 0.36
MSRB3-209ENST00000540804 RIPK3Q9Y572 518 aa17.27■□□□□ 0.36
MSRB3-209ENST00000540804 GREB1LQ9C091 1923 aaPredicted RBP17.26■□□□□ 0.35
MSRB3-209ENST00000540804 SLC25A27O95847 323 aa17.26■□□□□ 0.35
MSRB3-209ENST00000540804 MYCNP04198 464 aaPredicted RBP17.26■□□□□ 0.35
MSRB3-209ENST00000540804 CTDSPL2Q05D32 466 aa17.26■□□□□ 0.35
MSRB3-209ENST00000540804 PPARAQ07869 468 aa17.26■□□□□ 0.35
MSRB3-209ENST00000540804 SLF1Q9BQI6 1058 aa17.26■□□□□ 0.35
MSRB3-209ENST00000540804 NAPBQ9H115 298 aa17.26■□□□□ 0.35
MSRB3-209ENST00000540804 MTMR4Q9NYA4 1195 aa17.26■□□□□ 0.35
MSRB3-209ENST00000540804 TAL1P17542 331 aaPredicted RBP17.25■□□□□ 0.35
MSRB3-209ENST00000540804 MAGEA10P43363 369 aaPredicted RBP17.25■□□□□ 0.35
MSRB3-209ENST00000540804 PDE1AP54750 535 aa17.25■□□□□ 0.35
MSRB3-209ENST00000540804 TFAP4Q01664 338 aa17.25■□□□□ 0.35
MSRB3-209ENST00000540804 LRRFIP1Q32MZ4 808 aaKnown RBP17.25■□□□□ 0.35
MSRB3-209ENST00000540804 ABRAQ8N0Z2 381 aa17.25■□□□□ 0.35
MSRB3-209ENST00000540804 CPXCR1Q8N123 301 aa17.25■□□□□ 0.35
MSRB3-209ENST00000540804 KIFC2Q96AC6 838 aa17.25■□□□□ 0.35
MSRB3-209ENST00000540804 LRCH3Q96II8 777 aa17.25■□□□□ 0.35
MSRB3-209ENST00000540804 NACAP1Q9BZK3 213 aa17.25■□□□□ 0.35
MSRB3-209ENST00000540804 ZNF236Q9UL36 1845 aa17.25■□□□□ 0.35
MSRB3-209ENST00000540804 PARP14Q460N5 1801 aa17.24■□□□□ 0.35
MSRB3-209ENST00000540804 CEP290O15078 2479 aa17.24■□□□□ 0.35
MSRB3-209ENST00000540804 TSPY3P0CV98 308 aa17.24■□□□□ 0.35
MSRB3-209ENST00000540804 TSPY8P0CW00 308 aa17.24■□□□□ 0.35
MSRB3-209ENST00000540804 HDAC1Q13547 482 aaPredicted RBP17.24■□□□□ 0.35
MSRB3-209ENST00000540804 ZNF792Q3KQV3 632 aa17.24■□□□□ 0.35
MSRB3-209ENST00000540804 SNRNP48Q6IEG0 339 aaKnown RBP17.24■□□□□ 0.35
MSRB3-209ENST00000540804 RASGRP2Q7LDG7 609 aa17.24■□□□□ 0.35
MSRB3-209ENST00000540804 NEDD1Q8NHV4 660 aa17.24■□□□□ 0.35
MSRB3-209ENST00000540804 FAM227BQ96M60 508 aa17.24■□□□□ 0.35
MSRB3-209ENST00000540804 LNPKQ9C0E8 428 aa17.24■□□□□ 0.35
MSRB3-209ENST00000540804 SEPT4O43236 478 aa17.23■□□□□ 0.35
MSRB3-209ENST00000540804 NMT2O60551 498 aa17.23■□□□□ 0.35
MSRB3-209ENST00000540804 KCTD2Q14681 263 aa17.23■□□□□ 0.35
MSRB3-209ENST00000540804 B4GALNT3Q6L9W6 998 aa17.23■□□□□ 0.35
MSRB3-209ENST00000540804 MKL1Q969V6 931 aa17.23■□□□□ 0.35
MSRB3-209ENST00000540804 LENG1Q96BZ8 264 aaPredicted RBP17.23■□□□□ 0.35
MSRB3-209ENST00000540804 RAVER2Q9HCJ3 691 aaKnown RBP17.23■□□□□ 0.35
MSRB3-209ENST00000540804 ZBTB47Q9UFB7 747 aaPredicted RBP17.23■□□□□ 0.35
MSRB3-209ENST00000540804 A0A0D9SFI3 127 aa17.22■□□□□ 0.35
MSRB3-209ENST00000540804 DNM1LO00429 736 aa17.22■□□□□ 0.35
MSRB3-209ENST00000540804 MSCO60682 206 aa17.22■□□□□ 0.35
MSRB3-209ENST00000540804 TTLL1O95922 423 aa17.22■□□□□ 0.35
MSRB3-209ENST00000540804 IGHDP01880 384 aa17.22■□□□□ 0.35
MSRB3-209ENST00000540804 MDM2Q00987 491 aaPredicted RBP17.22■□□□□ 0.35
MSRB3-209ENST00000540804 PDE4BQ07343 736 aa17.22■□□□□ 0.35
MSRB3-209ENST00000540804 SLFN13Q68D06 897 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 90.3 ms