RNA–Protein interactions for RNA: ENST00000540699.1

ATL3-204, Transcript of atlastin GTPase 3, humanhuman

TSL 3

Gene ATL3, Length 714 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-204ENST00000540699 INTS4Q96HW7 963 aaKnown RBP12.42□□□□□ -0.42
ATL3-204ENST00000540699 TCEANC2Q96MN5 208 aa12.42□□□□□ -0.42
ATL3-204ENST00000540699 FEZ1Q99689 392 aa12.42□□□□□ -0.42
ATL3-204ENST00000540699 SLKQ9H2G2 1235 aaPredicted RBP12.42□□□□□ -0.42
ATL3-204ENST00000540699 VCPKMTQ9H867 229 aa12.42□□□□□ -0.42
ATL3-204ENST00000540699 ZSWIM5Q9P217 1185 aa12.42□□□□□ -0.42
ATL3-204ENST00000540699 B4E1Z4 1266 aa12.41□□□□□ -0.42
ATL3-204ENST00000540699 MGAMO43451 1857 aa12.41□□□□□ -0.42
ATL3-204ENST00000540699 NMT2O60551 498 aa12.41□□□□□ -0.42
ATL3-204ENST00000540699 KDM4AO75164 1064 aa12.41□□□□□ -0.42
ATL3-204ENST00000540699 VCAM1P19320 739 aa12.41□□□□□ -0.42
ATL3-204ENST00000540699 ST3GAL1Q11201 340 aa12.41□□□□□ -0.42
ATL3-204ENST00000540699 PABPC4Q13310 644 aaKnown RBP eCLIP12.41□□□□□ -0.42
ATL3-204ENST00000540699 CRHR2Q13324 411 aa12.41□□□□□ -0.42
ATL3-204ENST00000540699 RCSD1Q6JBY9 416 aa12.41□□□□□ -0.42
ATL3-204ENST00000540699 NOL8Q76FK4 1167 aaKnown RBP12.41□□□□□ -0.42
ATL3-204ENST00000540699 OTOP1Q7RTM1 612 aa12.41□□□□□ -0.42
ATL3-204ENST00000540699 GMCL1P1Q8NEA9 526 aa12.41□□□□□ -0.42
ATL3-204ENST00000540699 ZSCAN31Q96LW9 406 aaPredicted RBP12.41□□□□□ -0.42
ATL3-204ENST00000540699 TOMM22Q9NS69 142 aa12.41□□□□□ -0.42
ATL3-204ENST00000540699 CLIP2Q9UDT6 1046 aa12.41□□□□□ -0.42
ATL3-204ENST00000540699 TPCN1Q9ULQ1 816 aa12.41□□□□□ -0.42
ATL3-204ENST00000540699 COL11A1P12107 1806 aaPredicted RBP12.4□□□□□ -0.42
ATL3-204ENST00000540699 WDR46O15213 610 aaKnown RBP12.4□□□□□ -0.42
ATL3-204ENST00000540699 TRDNQ13061 729 aa12.4□□□□□ -0.42
ATL3-204ENST00000540699 TAF1CQ15572 869 aaPredicted RBP12.4□□□□□ -0.42
ATL3-204ENST00000540699 ME3Q16798 604 aa12.4□□□□□ -0.42
ATL3-204ENST00000540699 CCDC178Q5BJE1 867 aa12.4□□□□□ -0.42
ATL3-204ENST00000540699 Q6ZUG5 572 aa12.4□□□□□ -0.42
ATL3-204ENST00000540699 CYB5R4Q7L1T6 521 aa12.4□□□□□ -0.42
ATL3-204ENST00000540699 DGKHQ86XP1 1220 aa12.4□□□□□ -0.42
ATL3-204ENST00000540699 ZFYVE28Q9HCC9 887 aa12.4□□□□□ -0.42
ATL3-204ENST00000540699 GOPCQ9HD26 462 aa12.4□□□□□ -0.42
ATL3-204ENST00000540699 SH2B1Q9NRF2 756 aaPredicted RBP12.4□□□□□ -0.42
ATL3-204ENST00000540699 PNMA3Q9UL41 463 aa12.4□□□□□ -0.42
ATL3-204ENST00000540699 CIZ1Q9ULV3 898 aaPredicted RBP12.4□□□□□ -0.42
ATL3-204ENST00000540699 TRIM17Q9Y577 477 aa12.4□□□□□ -0.42
ATL3-204ENST00000540699 ZSWIM8A7E2V4 1837 aa12.39□□□□□ -0.43
ATL3-204ENST00000540699 USP17L15C9J2P7 530 aa12.39□□□□□ -0.43
ATL3-204ENST00000540699 USP17L13C9JLJ4 530 aa12.39□□□□□ -0.43
ATL3-204ENST00000540699 USP17L11C9JVI0 530 aa12.39□□□□□ -0.43
ATL3-204ENST00000540699 USP17L18D6R9N7 530 aa12.39□□□□□ -0.43
ATL3-204ENST00000540699 USP17L22D6RA61 530 aa12.39□□□□□ -0.43
ATL3-204ENST00000540699 USP17L17D6RBQ6 530 aa12.39□□□□□ -0.43
ATL3-204ENST00000540699 USP17L19D6RCP7 530 aa12.39□□□□□ -0.43
ATL3-204ENST00000540699 USP17L20D6RJB6 530 aa12.39□□□□□ -0.43
ATL3-204ENST00000540699 F5H6K3 240 aa12.39□□□□□ -0.43
ATL3-204ENST00000540699 TLR2O60603 784 aa12.39□□□□□ -0.43
ATL3-204ENST00000540699 NDUFB10O96000 172 aa12.39□□□□□ -0.43
ATL3-204ENST00000540699 TOP1P11387 765 aaKnown RBP12.39□□□□□ -0.43
ATL3-204ENST00000540699 MCM5P33992 734 aa12.39□□□□□ -0.43
ATL3-204ENST00000540699 EVCP57679 992 aa12.39□□□□□ -0.43
ATL3-204ENST00000540699 ATP2B2Q01814 1243 aa12.39□□□□□ -0.43
ATL3-204ENST00000540699 KLRC3Q07444 240 aa12.39□□□□□ -0.43
ATL3-204ENST00000540699 USP17L24Q0WX57 530 aa12.39□□□□□ -0.43
ATL3-204ENST00000540699 SEC23AQ15436 765 aa12.39□□□□□ -0.43
ATL3-204ENST00000540699 ZYXQ15942 572 aaKnown RBP12.39□□□□□ -0.43
ATL3-204ENST00000540699 CATSPERGQ6ZRH7 1159 aa12.39□□□□□ -0.43
ATL3-204ENST00000540699 RALYLQ86SE5 291 aaKnown RBP12.39□□□□□ -0.43
ATL3-204ENST00000540699 IQCA1Q86XH1 822 aa12.39□□□□□ -0.43
ATL3-204ENST00000540699 ENAHQ8N8S7 591 aaPredicted RBP12.39□□□□□ -0.43
ATL3-204ENST00000540699 CD99L2Q8TCZ2 262 aa12.39□□□□□ -0.43
ATL3-204ENST00000540699 ERO1AQ96HE7 468 aa12.39□□□□□ -0.43
ATL3-204ENST00000540699 PARK7Q99497 189 aaKnown RBP12.39□□□□□ -0.43
ATL3-204ENST00000540699 LARP6Q9BRS8 491 aaKnown RBP12.39□□□□□ -0.43
ATL3-204ENST00000540699 MTA3Q9BTC8 594 aa12.39□□□□□ -0.43
ATL3-204ENST00000540699 LRRC2Q9BYS8 371 aa12.39□□□□□ -0.43
ATL3-204ENST00000540699 ASCC2Q9H1I8 757 aaPredicted RBP12.39□□□□□ -0.43
ATL3-204ENST00000540699 FOXD4L1Q9NU39 408 aa12.39□□□□□ -0.43
ATL3-204ENST00000540699 STX8Q9UNK0 236 aa12.39□□□□□ -0.43
ATL3-204ENST00000540699 PRC1O43663 620 aa12.38□□□□□ -0.43
ATL3-204ENST00000540699 CYP2C8P10632 490 aa12.38□□□□□ -0.43
ATL3-204ENST00000540699 C17orf99Q6UX52 265 aa12.38□□□□□ -0.43
ATL3-204ENST00000540699 LBX2Q6XYB7 198 aa12.38□□□□□ -0.43
ATL3-204ENST00000540699 LRRC47Q8N1G4 583 aaKnown RBP12.38□□□□□ -0.43
ATL3-204ENST00000540699 BRF1Q92994 677 aa12.38□□□□□ -0.43
ATL3-204ENST00000540699 GMCL1Q96IK5 515 aa12.38□□□□□ -0.43
ATL3-204ENST00000540699 ZSCAN10Q96SZ4 725 aaPredicted RBP12.38□□□□□ -0.43
ATL3-204ENST00000540699 TMEM47Q9BQJ4 181 aa12.38□□□□□ -0.43
ATL3-204ENST00000540699 RPAP3Q9H6T3 665 aaPredicted RBP12.38□□□□□ -0.43
ATL3-204ENST00000540699 CWC22Q9HCG8 908 aaKnown RBP12.38□□□□□ -0.43
ATL3-204ENST00000540699 CHMP5Q9NZZ3 219 aa12.38□□□□□ -0.43
ATL3-204ENST00000540699 DOCK3Q8IZD9 2030 aa12.38□□□□□ -0.43
ATL3-204ENST00000540699 TNKSO95271 1327 aa12.37□□□□□ -0.43
ATL3-204ENST00000540699 MYPNQ86TC9 1320 aa12.37□□□□□ -0.43
ATL3-204ENST00000540699 SH2B2O14492 632 aaPredicted RBP12.37□□□□□ -0.43
ATL3-204ENST00000540699 HSP90AA1P07900 732 aaKnown RBP12.37□□□□□ -0.43
ATL3-204ENST00000540699 BCRP11274 1271 aa12.37□□□□□ -0.43
ATL3-204ENST00000540699 OSBPP22059 807 aa12.37□□□□□ -0.43
ATL3-204ENST00000540699 GCLCP48506 637 aaPredicted RBP12.37□□□□□ -0.43
ATL3-204ENST00000540699 CAP1Q01518 475 aa12.37□□□□□ -0.43
ATL3-204ENST00000540699 POTEEQ6S8J3 1075 aa12.37□□□□□ -0.43
ATL3-204ENST00000540699 CHST3Q7LGC8 479 aa12.37□□□□□ -0.43
ATL3-204ENST00000540699 SPICE1Q8N0Z3 855 aa12.37□□□□□ -0.43
ATL3-204ENST00000540699 P2RX7Q99572 595 aaKnown RBP12.37□□□□□ -0.43
ATL3-204ENST00000540699 ZKSCAN3Q9BRR0 538 aa12.37□□□□□ -0.43
ATL3-204ENST00000540699 PTPN22Q9Y2R2 807 aa12.37□□□□□ -0.43
ATL3-204ENST00000540699 PLA2G6O60733 806 aa12.36□□□□□ -0.43
ATL3-204ENST00000540699 SNHG28P0DPA3 235 aa12.36□□□□□ -0.43
ATL3-204ENST00000540699 HERVK_113P62684 666 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms