RNA–Protein interactions for RNA: ENST00000540434.1

TMEM258-205, Transcript of transmembrane protein 258, humanhuman

TSL 2

Gene TMEM258, Length 553 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-205ENST00000540434 ABCB5Q2M3G0 1257 aa13.62□□□□□ -0.23
TMEM258-205ENST00000540434 KIAA1755Q5JYT7 1200 aa13.62□□□□□ -0.23
TMEM258-205ENST00000540434 GIMAP6Q6P9H5 292 aa13.62□□□□□ -0.23
TMEM258-205ENST00000540434 ZNF280CQ8ND82 737 aa13.62□□□□□ -0.23
TMEM258-205ENST00000540434 CCDC136Q96JN2 1154 aa13.62□□□□□ -0.23
TMEM258-205ENST00000540434 WDR18Q9BV38 432 aa13.62□□□□□ -0.23
TMEM258-205ENST00000540434 TCF20Q9UGU0 1960 aaKnown RBP13.62□□□□□ -0.23
TMEM258-205ENST00000540434 MYH8P13535 1937 aa13.61□□□□□ -0.23
TMEM258-205ENST00000540434 PRDM1O75626 825 aa13.61□□□□□ -0.23
TMEM258-205ENST00000540434 FGAP02671 866 aa13.61□□□□□ -0.23
TMEM258-205ENST00000540434 ASNSP08243 561 aa13.61□□□□□ -0.23
TMEM258-205ENST00000540434 HSPD1P10809 573 aaKnown RBP13.61□□□□□ -0.23
TMEM258-205ENST00000540434 ZKSCAN1P17029 563 aaPredicted RBP13.61□□□□□ -0.23
TMEM258-205ENST00000540434 RASA1P20936 1047 aa13.61□□□□□ -0.23
TMEM258-205ENST00000540434 EPHB4P54760 987 aa13.61□□□□□ -0.23
TMEM258-205ENST00000540434 CTDSPL2Q05D32 466 aa13.61□□□□□ -0.23
TMEM258-205ENST00000540434 MTMR2Q13614 643 aa13.61□□□□□ -0.23
TMEM258-205ENST00000540434 SH3D19Q5HYK7 790 aa13.61□□□□□ -0.23
TMEM258-205ENST00000540434 ATXN2LQ8WWM7 1075 aaKnown RBP13.61□□□□□ -0.23
TMEM258-205ENST00000540434 NUDT12Q9BQG2 462 aa13.61□□□□□ -0.23
TMEM258-205ENST00000540434 LRFN3Q9BTN0 628 aa13.61□□□□□ -0.23
TMEM258-205ENST00000540434 TRIM34Q9BYJ4 488 aa13.61□□□□□ -0.23
TMEM258-205ENST00000540434 TXNRD2Q9NNW7 524 aa13.61□□□□□ -0.23
TMEM258-205ENST00000540434 EMILIN3Q9NT22 766 aa13.61□□□□□ -0.23
TMEM258-205ENST00000540434 THEGQ9P2T0 379 aa13.61□□□□□ -0.23
TMEM258-205ENST00000540434 TRIM43BA6NCK2 446 aa13.6□□□□□ -0.23
TMEM258-205ENST00000540434 CENPBP07199 599 aaPredicted RBP13.6□□□□□ -0.23
TMEM258-205ENST00000540434 GNAT2P19087 354 aa13.6□□□□□ -0.23
TMEM258-205ENST00000540434 TDO2P48775 406 aa13.6□□□□□ -0.23
TMEM258-205ENST00000540434 PABPC4Q13310 644 aaKnown RBP eCLIP13.6□□□□□ -0.238e-27■■■□□ 15.4
TMEM258-205ENST00000540434 RAB3GAP1Q15042 981 aa13.6□□□□□ -0.23
TMEM258-205ENST00000540434 LRRFIP1Q32MZ4 808 aaKnown RBP13.6□□□□□ -0.23
TMEM258-205ENST00000540434 TRIM43Q96BQ3 446 aaPredicted RBP13.6□□□□□ -0.23
TMEM258-205ENST00000540434 EPHX3Q9H6B9 360 aa13.6□□□□□ -0.23
TMEM258-205ENST00000540434 NCOR1O75376 2440 aa13.6□□□□□ -0.23
TMEM258-205ENST00000540434 GREB1LQ9C091 1923 aaPredicted RBP13.59□□□□□ -0.23
TMEM258-205ENST00000540434 MPHOSPH10O00566 681 aaKnown RBP13.59□□□□□ -0.23
TMEM258-205ENST00000540434 ITGB8P26012 769 aa13.59□□□□□ -0.23
TMEM258-205ENST00000540434 CHMLP26374 656 aa13.59□□□□□ -0.23
TMEM258-205ENST00000540434 BACE1P56817 501 aa13.59□□□□□ -0.23
TMEM258-205ENST00000540434 ALX1Q15699 326 aa13.59□□□□□ -0.23
TMEM258-205ENST00000540434 ZYXQ15942 572 aaKnown RBP13.59□□□□□ -0.23
TMEM258-205ENST00000540434 Q3C1V9 767 aa13.59□□□□□ -0.23
TMEM258-205ENST00000540434 MORN1Q5T089 497 aa13.59□□□□□ -0.23
TMEM258-205ENST00000540434 TRMT44Q8IYL2 757 aaKnown RBP13.59□□□□□ -0.23
TMEM258-205ENST00000540434 SOCS4Q8WXH5 440 aa13.59□□□□□ -0.23
TMEM258-205ENST00000540434 SNX27Q96L92 541 aa13.59□□□□□ -0.23
TMEM258-205ENST00000540434 RNPC3Q96LT9 517 aaKnown RBP13.59□□□□□ -0.23
TMEM258-205ENST00000540434 P2RX7Q99572 595 aaKnown RBP13.59□□□□□ -0.23
TMEM258-205ENST00000540434 RBPJLQ9UBG7 517 aa13.59□□□□□ -0.23
TMEM258-205ENST00000540434 ARPP21Q9UBL0 812 aaPredicted RBP13.59□□□□□ -0.23
TMEM258-205ENST00000540434 CCDC171Q6TFL3 1326 aa13.59□□□□□ -0.23
TMEM258-205ENST00000540434 ROBO3Q96MS0 1386 aa13.58□□□□□ -0.23
TMEM258-205ENST00000540434 MYO9BQ13459 2157 aa13.58□□□□□ -0.24
TMEM258-205ENST00000540434 DNAJB2P25686 324 aa13.58□□□□□ -0.24
TMEM258-205ENST00000540434 HOXA7P31268 230 aaPredicted RBP13.58□□□□□ -0.24
TMEM258-205ENST00000540434 MRPS5P82675 430 aaKnown RBP13.58□□□□□ -0.24
TMEM258-205ENST00000540434 PPARAQ07869 468 aa13.58□□□□□ -0.24
TMEM258-205ENST00000540434 TRIM60Q495X7 471 aa13.58□□□□□ -0.24
TMEM258-205ENST00000540434 GJC2Q5T442 439 aaPredicted RBP13.58□□□□□ -0.24
TMEM258-205ENST00000540434 C1QTNF1Q9BXJ1 281 aa13.58□□□□□ -0.24
TMEM258-205ENST00000540434 TBC1D2Q9BYX2 928 aa13.58□□□□□ -0.24
TMEM258-205ENST00000540434 NAPBQ9H115 298 aa13.58□□□□□ -0.24
TMEM258-205ENST00000540434 ZNF576Q9H609 170 aa13.58□□□□□ -0.24
TMEM258-205ENST00000540434 PDLIM7Q9NR12 457 aa13.58□□□□□ -0.24
TMEM258-205ENST00000540434 FLRT1Q9NZU1 646 aa13.58□□□□□ -0.24
TMEM258-205ENST00000540434 SWAP70Q9UH65 585 aa13.58□□□□□ -0.24
TMEM258-205ENST00000540434 REV3LO60673 3130 aa13.57□□□□□ -0.24
TMEM258-205ENST00000540434 XIRP2A4UGR9 3374 aa13.57□□□□□ -0.24
TMEM258-205ENST00000540434 USP17L10C9JJH3 530 aa13.57□□□□□ -0.24
TMEM258-205ENST00000540434 HAND2P61296 217 aa13.57□□□□□ -0.24
TMEM258-205ENST00000540434 PTH1RQ03431 593 aa13.57□□□□□ -0.24
TMEM258-205ENST00000540434 FAM47AQ5JRC9 791 aa13.57□□□□□ -0.24
TMEM258-205ENST00000540434 TICAM2Q86XR7 235 aa13.57□□□□□ -0.24
TMEM258-205ENST00000540434 GPRC5AQ8NFJ5 357 aa13.57□□□□□ -0.24
TMEM258-205ENST00000540434 PORCNQ9H237 461 aa13.57□□□□□ -0.24
TMEM258-205ENST00000540434 PRDM12Q9H4Q4 367 aa13.57□□□□□ -0.24
TMEM258-205ENST00000540434 DIAPH3Q9NSV4 1193 aa13.57□□□□□ -0.24
TMEM258-205ENST00000540434 GINM1Q9NU53 330 aa13.57□□□□□ -0.24
TMEM258-205ENST00000540434 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.57□□□□□ -0.24
TMEM258-205ENST00000540434 HCN4Q9Y3Q4 1203 aa13.57□□□□□ -0.24
TMEM258-205ENST00000540434 IGKV6D-41A0A0C4DH26 115 aa13.56□□□□□ -0.24
TMEM258-205ENST00000540434 NEFLP07196 543 aa13.56□□□□□ -0.24
TMEM258-205ENST00000540434 EEF2P13639 858 aaKnown RBP13.56□□□□□ -0.24
TMEM258-205ENST00000540434 CNGA1P29973 690 aa13.56□□□□□ -0.24
TMEM258-205ENST00000540434 MAPK4P31152 587 aa13.56□□□□□ -0.24
TMEM258-205ENST00000540434 HERVK_113P62684 666 aa13.56□□□□□ -0.24
TMEM258-205ENST00000540434 ADGRE1Q14246 886 aa13.56□□□□□ -0.24
TMEM258-205ENST00000540434 ANO1Q5XXA6 986 aa13.56□□□□□ -0.24
TMEM258-205ENST00000540434 SLC39A5Q6ZMH5 540 aa13.56□□□□□ -0.24
TMEM258-205ENST00000540434 TMEM179Q6ZVK1 233 aa13.56□□□□□ -0.24
TMEM258-205ENST00000540434 GPR142Q7Z601 462 aa13.56□□□□□ -0.24
TMEM258-205ENST00000540434 DDRGK1Q96HY6 314 aa13.56□□□□□ -0.24
TMEM258-205ENST00000540434 NACAP1Q9BZK3 213 aa13.56□□□□□ -0.24
TMEM258-205ENST00000540434 AS3MTQ9HBK9 375 aa13.56□□□□□ -0.24
TMEM258-205ENST00000540434 CABP5Q9NP86 173 aa13.56□□□□□ -0.24
TMEM258-205ENST00000540434 ANAPC4Q9UJX5 808 aa13.56□□□□□ -0.24
TMEM258-205ENST00000540434 TAF6LQ9Y6J9 622 aa13.56□□□□□ -0.24
TMEM258-205ENST00000540434 NMT2O60551 498 aa13.55□□□□□ -0.24
TMEM258-205ENST00000540434 FGRP09769 529 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms