RNA–Protein interactions for RNA: ENST00000540430.5

LDHA-218, Transcript of lactate dehydrogenase A, humanhuman

TSL 2 BASIC

Gene LDHA, Length 2,305 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-218ENST00000540430 CMA1P23946 247 aa10.62□□□□□ -0.71
LDHA-218ENST00000540430 CASP8Q14790 479 aa10.62□□□□□ -0.71
LDHA-218ENST00000540430 KIF4BQ2VIQ3 1234 aa10.62□□□□□ -0.71
LDHA-218ENST00000540430 NBPF20Q3BBV1 942 aa10.62□□□□□ -0.71
LDHA-218ENST00000540430 ZNF589Q86UQ0 364 aaPredicted RBP10.62□□□□□ -0.71
LDHA-218ENST00000540430 FAM177A1Q8N128 213 aaPredicted RBP10.62□□□□□ -0.71
LDHA-218ENST00000540430 CNNM3Q8NE01 707 aa10.62□□□□□ -0.71
LDHA-218ENST00000540430 AGBL3Q8NEM8 1001 aa10.62□□□□□ -0.71
LDHA-218ENST00000540430 TTLL11Q8NHH1 800 aa10.62□□□□□ -0.71
LDHA-218ENST00000540430 CTCFLQ8NI51 663 aaPredicted RBP10.62□□□□□ -0.71
LDHA-218ENST00000540430 SUFUQ9UMX1 484 aa10.62□□□□□ -0.71
LDHA-218ENST00000540430 PSME4Q14997 1843 aa10.62□□□□□ -0.71
LDHA-218ENST00000540430 CCDC196A0A1B0GTZ2 297 aa10.61□□□□□ -0.71
LDHA-218ENST00000540430 NEURL1BA8MQ27 555 aa10.61□□□□□ -0.71
LDHA-218ENST00000540430 AARSP49588 968 aaKnown RBP eCLIP10.61□□□□□ -0.71
LDHA-218ENST00000540430 STK38Q15208 465 aa10.61□□□□□ -0.71
LDHA-218ENST00000540430 SF3A1Q15459 793 aaKnown RBP10.61□□□□□ -0.71
LDHA-218ENST00000540430 RBM26Q5T8P6 1007 aaKnown RBP10.61□□□□□ -0.71
LDHA-218ENST00000540430 ABCB6Q9NP58 842 aa10.61□□□□□ -0.71
LDHA-218ENST00000540430 BSDC1Q9NW68 430 aaPredicted RBP10.61□□□□□ -0.71
LDHA-218ENST00000540430 SPTLC2O15270 562 aa10.61□□□□□ -0.71
LDHA-218ENST00000540430 WDHD1O75717 1129 aaPredicted RBP10.61□□□□□ -0.71
LDHA-218ENST00000540430 CCDC175P0C221 793 aa10.61□□□□□ -0.71
LDHA-218ENST00000540430 HUNKP57058 714 aa10.61□□□□□ -0.71
LDHA-218ENST00000540430 ZNF280AP59817 542 aaPredicted RBP10.61□□□□□ -0.71
LDHA-218ENST00000540430 NOGQ13253 232 aa10.61□□□□□ -0.71
LDHA-218ENST00000540430 CWF19L2Q2TBE0 894 aaKnown RBP10.61□□□□□ -0.71
LDHA-218ENST00000540430 RSBN1LQ6PCB5 846 aaPredicted RBP10.61□□□□□ -0.71
LDHA-218ENST00000540430 DHX32Q7L7V1 743 aaKnown RBP10.61□□□□□ -0.71
LDHA-218ENST00000540430 BRAPQ7Z569 592 aa10.61□□□□□ -0.71
LDHA-218ENST00000540430 PODNQ7Z5L7 613 aa10.61□□□□□ -0.71
LDHA-218ENST00000540430 TC2NQ8N9U0 490 aa10.61□□□□□ -0.71
LDHA-218ENST00000540430 H7C1W4 665 aa10.6□□□□□ -0.71
LDHA-218ENST00000540430 N4BP1O75113 896 aaKnown RBP10.6□□□□□ -0.71
LDHA-218ENST00000540430 SPECC1LQ69YQ0 1117 aa10.6□□□□□ -0.71
LDHA-218ENST00000540430 WDR93Q6P2C0 686 aa10.6□□□□□ -0.71
LDHA-218ENST00000540430 C2orf69Q8N8R5 385 aa10.6□□□□□ -0.71
LDHA-218ENST00000540430 ZNF274Q96GC6 653 aaPredicted RBP10.6□□□□□ -0.71
LDHA-218ENST00000540430 PNKPQ96T60 521 aa10.6□□□□□ -0.71
LDHA-218ENST00000540430 NAA15Q9BXJ9 866 aaKnown RBP10.6□□□□□ -0.71
LDHA-218ENST00000540430 GREM2Q9H772 168 aa10.6□□□□□ -0.71
LDHA-218ENST00000540430 FAM204AQ9H8W3 233 aa10.6□□□□□ -0.71
LDHA-218ENST00000540430 GBA2Q9HCG7 927 aaPredicted RBP10.6□□□□□ -0.71
LDHA-218ENST00000540430 BIN1O00499 593 aa10.59□□□□□ -0.71
LDHA-218ENST00000540430 DLK2Q6UY11 383 aa10.59□□□□□ -0.71
LDHA-218ENST00000540430 TOGARAM2Q6ZUX3 1019 aa10.59□□□□□ -0.71
LDHA-218ENST00000540430 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.59□□□□□ -0.71
LDHA-218ENST00000540430 UBE3BQ7Z3V4 1068 aa10.59□□□□□ -0.71
LDHA-218ENST00000540430 SULF1Q8IWU6 871 aa10.59□□□□□ -0.71
LDHA-218ENST00000540430 ANKRD20A12PQ8NF67 263 aa10.59□□□□□ -0.71
LDHA-218ENST00000540430 CCDC102AQ96A19 550 aa10.59□□□□□ -0.71
LDHA-218ENST00000540430 EAF2Q96CJ1 260 aaPredicted RBP10.59□□□□□ -0.71
LDHA-218ENST00000540430 BICC1Q9H694 974 aaKnown RBP10.59□□□□□ -0.71
LDHA-218ENST00000540430 GGA3Q9NZ52 723 aa10.59□□□□□ -0.71
LDHA-218ENST00000540430 RAI14Q9P0K7 980 aa10.59□□□□□ -0.71
LDHA-218ENST00000540430 MINPP1Q9UNW1 487 aa10.59□□□□□ -0.71
LDHA-218ENST00000540430 LAMA4Q16363 1823 aa10.59□□□□□ -0.71
LDHA-218ENST00000540430 FAM237AA0A1B0GTK4 181 aa10.59□□□□□ -0.71
LDHA-218ENST00000540430 USP17L3A6NCW0 530 aa10.59□□□□□ -0.71
LDHA-218ENST00000540430 USP17L4A6NCW7 530 aa10.59□□□□□ -0.71
LDHA-218ENST00000540430 ADM5C9JUS6 153 aa10.59□□□□□ -0.71
LDHA-218ENST00000540430 SHOX2O60902 331 aaPredicted RBP10.59□□□□□ -0.71
LDHA-218ENST00000540430 CYP21A2P08686 494 aa10.59□□□□□ -0.71
LDHA-218ENST00000540430 WHAMMP3Q1A5X7 153 aa10.59□□□□□ -0.71
LDHA-218ENST00000540430 USP17L1Q7RTZ2 530 aa10.59□□□□□ -0.71
LDHA-218ENST00000540430 FBXL16Q8N461 479 aa10.59□□□□□ -0.71
LDHA-218ENST00000540430 AFAP1L1Q8TED9 768 aa10.59□□□□□ -0.71
LDHA-218ENST00000540430 GMLQ99445 158 aa10.59□□□□□ -0.71
LDHA-218ENST00000540430 PLA2G12BQ9BX93 195 aa10.59□□□□□ -0.71
LDHA-218ENST00000540430 SIL1Q9H173 461 aa10.59□□□□□ -0.71
LDHA-218ENST00000540430 SPEF2Q9C093 1822 aa10.59□□□□□ -0.71
LDHA-218ENST00000540430 KIF5CO60282 957 aa10.58□□□□□ -0.72
LDHA-218ENST00000540430 SASH1O94885 1247 aa10.58□□□□□ -0.72
LDHA-218ENST00000540430 ERLIN2O94905 339 aa10.58□□□□□ -0.72
LDHA-218ENST00000540430 USP17L8P0C7I0 530 aa10.58□□□□□ -0.72
LDHA-218ENST00000540430 PFKFB1P16118 471 aa10.58□□□□□ -0.72
LDHA-218ENST00000540430 MCM3P25205 808 aa10.58□□□□□ -0.72
LDHA-218ENST00000540430 TDO2P48775 406 aa10.58□□□□□ -0.72
LDHA-218ENST00000540430 GCKRQ14397 625 aa10.58□□□□□ -0.72
LDHA-218ENST00000540430 RGMBQ6NW40 437 aa10.58□□□□□ -0.72
LDHA-218ENST00000540430 TICAM2Q86XR7 235 aa10.58□□□□□ -0.72
LDHA-218ENST00000540430 ELOA2Q8IYF1 753 aaPredicted RBP10.58□□□□□ -0.72
LDHA-218ENST00000540430 ABHD8Q96I13 439 aa10.58□□□□□ -0.72
LDHA-218ENST00000540430 PANX2Q96RD6 677 aa10.58□□□□□ -0.72
LDHA-218ENST00000540430 A1CFQ9NQ94 594 aaKnown RBP10.58□□□□□ -0.72
LDHA-218ENST00000540430 INTS13Q9NVM9 706 aa10.58□□□□□ -0.72
LDHA-218ENST00000540430 TMEM232C9JQI7 657 aa10.58□□□□□ -0.72
LDHA-218ENST00000540430 IGHMBP2P38935 993 aaKnown RBP10.58□□□□□ -0.72
LDHA-218ENST00000540430 EXOSC10Q01780 885 aaKnown RBP10.58□□□□□ -0.72
LDHA-218ENST00000540430 TRDNQ13061 729 aa10.58□□□□□ -0.72
LDHA-218ENST00000540430 G3BP1Q13283 466 aaKnown RBP eCLIP10.58□□□□□ -0.721e-14■■■■□ 25
LDHA-218ENST00000540430 E2F4Q16254 413 aa10.58□□□□□ -0.72
LDHA-218ENST00000540430 MICALL1Q8N3F8 863 aa10.58□□□□□ -0.72
LDHA-218ENST00000540430 MYOZ2Q9NPC6 264 aa10.58□□□□□ -0.72
LDHA-218ENST00000540430 TSKSQ9UJT2 592 aa10.58□□□□□ -0.72
LDHA-218ENST00000540430 HPSEQ9Y251 543 aa10.58□□□□□ -0.72
LDHA-218ENST00000540430 RNF40O75150 1001 aa10.57□□□□□ -0.72
LDHA-218ENST00000540430 PRPF6O94906 941 aaKnown RBP10.57□□□□□ -0.72
LDHA-218ENST00000540430 VSNL1P62760 191 aa10.57□□□□□ -0.72
LDHA-218ENST00000540430 SCARF1Q14162 830 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms