RNA–Protein interactions for RNA: ENST00000540236.3

PBX1-212, Transcript of PBX homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene PBX1, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-212ENST00000540236 C1orf141Q5JVX7 400 aa12.24□□□□□ -0.45
PBX1-212ENST00000540236 NBPF10Q6P3W6 841 aaKnown RBP12.24□□□□□ -0.45
PBX1-212ENST00000540236 APBB1IPQ7Z5R6 666 aaPredicted RBP12.24□□□□□ -0.45
PBX1-212ENST00000540236 SLC39A2Q9NP94 309 aa12.24□□□□□ -0.45
PBX1-212ENST00000540236 FAF1Q9UNN5 650 aaPredicted RBP12.24□□□□□ -0.45
PBX1-212ENST00000540236 B4DLN1 442 aa12.24□□□□□ -0.45
PBX1-212ENST00000540236 STAT6P42226 847 aa12.24□□□□□ -0.45
PBX1-212ENST00000540236 MORC3Q14149 939 aa12.24□□□□□ -0.45
PBX1-212ENST00000540236 CFAP221Q4G0U5 840 aa12.24□□□□□ -0.45
PBX1-212ENST00000540236 CAPN12Q6ZSI9 719 aa12.24□□□□□ -0.45
PBX1-212ENST00000540236 FMR1NBQ8N0W7 255 aaPredicted RBP12.24□□□□□ -0.45
PBX1-212ENST00000540236 MCUR1Q96AQ8 359 aa12.24□□□□□ -0.45
PBX1-212ENST00000540236 NAP1L3Q99457 506 aaPredicted RBP12.24□□□□□ -0.45
PBX1-212ENST00000540236 NOC4LQ9BVI4 516 aaKnown RBP12.24□□□□□ -0.45
PBX1-212ENST00000540236 C19orf44Q9H6X5 657 aa12.24□□□□□ -0.45
PBX1-212ENST00000540236 MAP2K7O14733 419 aa12.24□□□□□ -0.45
PBX1-212ENST00000540236 CHGBP05060 677 aa12.24□□□□□ -0.45
PBX1-212ENST00000540236 MYBL2P10244 700 aa12.24□□□□□ -0.45
PBX1-212ENST00000540236 FMR1Q06787 632 aaKnown RBP eCLIP12.24□□□□□ -0.45
PBX1-212ENST00000540236 BZW1Q7L1Q6 419 aaKnown RBP12.24□□□□□ -0.45
PBX1-212ENST00000540236 SPATA17Q96L03 361 aa12.24□□□□□ -0.45
PBX1-212ENST00000540236 ABL1P00519 1130 aa12.24□□□□□ -0.45
PBX1-212ENST00000540236 KRT18P05783 430 aaKnown RBP12.24□□□□□ -0.45
PBX1-212ENST00000540236 MMEP08473 750 aa12.24□□□□□ -0.45
PBX1-212ENST00000540236 SERPINB4P48594 390 aa12.24□□□□□ -0.45
PBX1-212ENST00000540236 SMTNP53814 917 aa12.24□□□□□ -0.45
PBX1-212ENST00000540236 DTX3LQ8TDB6 740 aa12.24□□□□□ -0.45
PBX1-212ENST00000540236 TTC36A6NLP5 189 aa12.23□□□□□ -0.45
PBX1-212ENST00000540236 A8MUI8 341 aa12.23□□□□□ -0.45
PBX1-212ENST00000540236 IGF2BP3O00425 579 aaKnown RBP eCLIP12.23□□□□□ -0.45
PBX1-212ENST00000540236 RGS16O15492 202 aaPredicted RBP12.23□□□□□ -0.45
PBX1-212ENST00000540236 IFIT1P09914 478 aaKnown RBP12.23□□□□□ -0.45
PBX1-212ENST00000540236 EHHADHQ08426 723 aa12.23□□□□□ -0.45
PBX1-212ENST00000540236 ERLEC1Q96DZ1 483 aa12.23□□□□□ -0.45
PBX1-212ENST00000540236 ATP6V0A4Q9HBG4 840 aa12.23□□□□□ -0.45
PBX1-212ENST00000540236 TFCP2Q12800 502 aa12.23□□□□□ -0.45
PBX1-212ENST00000540236 ANKRD20A8PQ5CZ79 823 aa12.23□□□□□ -0.45
PBX1-212ENST00000540236 TC2NQ8N9U0 490 aa12.23□□□□□ -0.45
PBX1-212ENST00000540236 ANLNQ9NQW6 1124 aa12.23□□□□□ -0.45
PBX1-212ENST00000540236 VPS54Q9P1Q0 977 aa12.23□□□□□ -0.45
PBX1-212ENST00000540236 RCN2Q14257 317 aa12.23□□□□□ -0.45
PBX1-212ENST00000540236 OLFML1Q6UWY5 402 aa12.23□□□□□ -0.45
PBX1-212ENST00000540236 NSUN7Q8NE18 718 aaKnown RBP12.23□□□□□ -0.45
PBX1-212ENST00000540236 LZTS1Q9Y250 596 aa12.23□□□□□ -0.45
PBX1-212ENST00000540236 UTP11Q9Y3A2 253 aaKnown RBP12.23□□□□□ -0.45
PBX1-212ENST00000540236 MFAP3LO75121 409 aa12.23□□□□□ -0.45
PBX1-212ENST00000540236 DDX58O95786 925 aaKnown RBP12.23□□□□□ -0.45
PBX1-212ENST00000540236 PYGBP11216 843 aa12.23□□□□□ -0.45
PBX1-212ENST00000540236 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.23□□□□□ -0.45
PBX1-212ENST00000540236 RFC5P40937 340 aa12.23□□□□□ -0.45
PBX1-212ENST00000540236 RUFY4Q6ZNE9 571 aa12.23□□□□□ -0.45
PBX1-212ENST00000540236 MAP7D3Q8IWC1 876 aa12.23□□□□□ -0.45
PBX1-212ENST00000540236 UBA5Q9GZZ9 404 aa12.23□□□□□ -0.45
PBX1-212ENST00000540236 INTS9Q9NV88 658 aaKnown RBP12.23□□□□□ -0.45
PBX1-212ENST00000540236 TBK1Q9UHD2 729 aa12.23□□□□□ -0.45
PBX1-212ENST00000540236 GAPVD1Q14C86 1478 aa12.22□□□□□ -0.45
PBX1-212ENST00000540236 TTMPQ5BVD1 217 aa12.22□□□□□ -0.45
PBX1-212ENST00000540236 TMCO5AQ8N6Q1 288 aa12.22□□□□□ -0.45
PBX1-212ENST00000540236 ZNF483Q8TF39 744 aaPredicted RBP12.22□□□□□ -0.45
PBX1-212ENST00000540236 CHP1Q99653 195 aa12.22□□□□□ -0.45
PBX1-212ENST00000540236 MMADHCQ9H3L0 296 aaPredicted RBP12.22□□□□□ -0.45
PBX1-212ENST00000540236 PPP1R37O75864 691 aa12.22□□□□□ -0.45
PBX1-212ENST00000540236 PLCD1P51178 756 aa12.22□□□□□ -0.45
PBX1-212ENST00000540236 AZI2Q9H6S1 392 aa12.22□□□□□ -0.45
PBX1-212ENST00000540236 DNAJC17Q9NVM6 304 aaKnown RBP12.22□□□□□ -0.45
PBX1-212ENST00000540236 ZBTB21Q9ULJ3 1066 aa12.22□□□□□ -0.45
PBX1-212ENST00000540236 NDUFA10O95299 355 aa12.22□□□□□ -0.45
PBX1-212ENST00000540236 RPS6KA3P51812 740 aa12.22□□□□□ -0.45
PBX1-212ENST00000540236 MAP7Q14244 749 aa12.22□□□□□ -0.45
PBX1-212ENST00000540236 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.22□□□□□ -0.45
PBX1-212ENST00000540236 RRAGAQ7L523 313 aa12.22□□□□□ -0.45
PBX1-212ENST00000540236 LINC00301Q8NCQ3 95 aa12.22□□□□□ -0.45
PBX1-212ENST00000540236 ZFATQ9P243 1243 aa12.22□□□□□ -0.45
PBX1-212ENST00000540236 IKQ13123 557 aaPredicted RBP12.22□□□□□ -0.45
PBX1-212ENST00000540236 PAK1Q13153 545 aa12.22□□□□□ -0.45
PBX1-212ENST00000540236 NAA16Q6N069 864 aaPredicted RBP12.22□□□□□ -0.45
PBX1-212ENST00000540236 CCNI2Q6ZMN8 369 aaPredicted RBP12.22□□□□□ -0.45
PBX1-212ENST00000540236 FAM133AQ8N9E0 248 aa12.22□□□□□ -0.45
PBX1-212ENST00000540236 HDAC7Q8WUI4 952 aa12.22□□□□□ -0.45
PBX1-212ENST00000540236 C2CD2Q9Y426 696 aa12.22□□□□□ -0.45
PBX1-212ENST00000540236 A6NNZ2 444 aa12.22□□□□□ -0.45
PBX1-212ENST00000540236 KDM5AP29375 1690 aaKnown RBP12.22□□□□□ -0.45
PBX1-212ENST00000540236 TUBB8Q3ZCM7 444 aa12.22□□□□□ -0.45
PBX1-212ENST00000540236 ALS2CLQ60I27 953 aa12.22□□□□□ -0.45
PBX1-212ENST00000540236 TMC4Q7Z404 712 aa12.22□□□□□ -0.45
PBX1-212ENST00000540236 ATP6V1G3Q96LB4 118 aa12.22□□□□□ -0.45
PBX1-212ENST00000540236 NHEJ1Q9H9Q4 299 aaPredicted RBP12.22□□□□□ -0.45
PBX1-212ENST00000540236 RIMS2Q9UQ26 1411 aa12.22□□□□□ -0.45
PBX1-212ENST00000540236 FANCD2Q9BXW9 1451 aa12.21□□□□□ -0.45
PBX1-212ENST00000540236 NOX5Q96PH1 765 aa12.21□□□□□ -0.45
PBX1-212ENST00000540236 MOV10L1Q9BXT6 1211 aaKnown RBP12.21□□□□□ -0.45
PBX1-212ENST00000540236 HYOU1Q9Y4L1 999 aa12.21□□□□□ -0.45
PBX1-212ENST00000540236 ARHGEF12Q9NZN5 1544 aa12.21□□□□□ -0.45
PBX1-212ENST00000540236 MINDY4BA8MYZ0 360 aa12.21□□□□□ -0.45
PBX1-212ENST00000540236 IKBKBO14920 756 aa12.21□□□□□ -0.45
PBX1-212ENST00000540236 ZCCHC18P0CG32 403 aa12.21□□□□□ -0.45
PBX1-212ENST00000540236 DENND2CQ68D51 928 aa12.21□□□□□ -0.45
PBX1-212ENST00000540236 SDCCAG8Q86SQ7 713 aaPredicted RBP12.21□□□□□ -0.45
PBX1-212ENST00000540236 RETREG2Q8NC44 543 aa12.21□□□□□ -0.45
PBX1-212ENST00000540236 RCOR1Q9UKL0 485 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms