RNA–Protein interactions for RNA: ENST00000540090.5

LPCAT3-210, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 1 (best)

Gene LPCAT3, Length 974 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-210ENST00000540090 C12orf60Q5U649 245 aa24.08■■□□□ 1.45
LPCAT3-210ENST00000540090 RIOX2Q8IUF8 465 aa24.08■■□□□ 1.45
LPCAT3-210ENST00000540090 PANK1Q8TE04 598 aa24.08■■□□□ 1.45
LPCAT3-210ENST00000540090 DIS3Q9Y2L1 958 aaKnown RBP24.08■■□□□ 1.45
LPCAT3-210ENST00000540090 TACC3Q9Y6A5 838 aa24.08■■□□□ 1.45
LPCAT3-210ENST00000540090 LTBP2Q14767 1821 aa24.07■■□□□ 1.44
LPCAT3-210ENST00000540090 A0A0G2JMZ2 1700 aa24.07■■□□□ 1.44
LPCAT3-210ENST00000540090 SMIM22K7EJ46 135 aa24.07■■□□□ 1.44
LPCAT3-210ENST00000540090 RARBP10826 455 aa24.07■■□□□ 1.44
LPCAT3-210ENST00000540090 ADD2P35612 726 aa24.07■■□□□ 1.44
LPCAT3-210ENST00000540090 MMP19Q99542 508 aa24.07■■□□□ 1.44
LPCAT3-210ENST00000540090 XPNPEP3Q9NQH7 507 aa24.07■■□□□ 1.44
LPCAT3-210ENST00000540090 NAV1Q8NEY1 1877 aa24.07■■□□□ 1.44
LPCAT3-210ENST00000540090 CDH23Q9H251 3354 aa24.06■■□□□ 1.44
LPCAT3-210ENST00000540090 MBD4O95243 580 aa24.06■■□□□ 1.44
LPCAT3-210ENST00000540090 ITGB8P26012 769 aa24.06■■□□□ 1.44
LPCAT3-210ENST00000540090 ZNF792Q3KQV3 632 aa24.06■■□□□ 1.44
LPCAT3-210ENST00000540090 SLFNL1Q499Z3 407 aa24.06■■□□□ 1.44
LPCAT3-210ENST00000540090 SAMD1Q6SPF0 538 aaPredicted RBP24.06■■□□□ 1.44
LPCAT3-210ENST00000540090 TINF2Q9BSI4 451 aa24.06■■□□□ 1.44
LPCAT3-210ENST00000540090 PAG1Q9NWQ8 432 aa24.06■■□□□ 1.44
LPCAT3-210ENST00000540090 CYP2D7A0A087X1C5 515 aa24.05■■□□□ 1.44
LPCAT3-210ENST00000540090 USP17L12C9JPN9 530 aa24.05■■□□□ 1.44
LPCAT3-210ENST00000540090 USP17L21D6R901 530 aa24.05■■□□□ 1.44
LPCAT3-210ENST00000540090 PGK2P07205 417 aa24.05■■□□□ 1.44
LPCAT3-210ENST00000540090 EEF2P13639 858 aaKnown RBP24.05■■□□□ 1.44
LPCAT3-210ENST00000540090 C16orf86Q6ZW13 317 aa24.05■■□□□ 1.44
LPCAT3-210ENST00000540090 RNF180Q86T96 592 aa24.05■■□□□ 1.44
LPCAT3-210ENST00000540090 RPAP2Q8IXW5 612 aaPredicted RBP24.05■■□□□ 1.44
LPCAT3-210ENST00000540090 TTYH1Q9H313 450 aaPredicted RBP24.05■■□□□ 1.44
LPCAT3-210ENST00000540090 KANSL2Q9H9L4 492 aa24.05■■□□□ 1.44
LPCAT3-210ENST00000540090 FBXO28Q9NVF7 368 aa24.05■■□□□ 1.44
LPCAT3-210ENST00000540090 PRUNE2Q8WUY3 3088 aa24.05■■□□□ 1.44
LPCAT3-210ENST00000540090 APBB1O00213 710 aa24.04■■□□□ 1.44
LPCAT3-210ENST00000540090 VWA5AO00534 786 aa24.04■■□□□ 1.44
LPCAT3-210ENST00000540090 STAT3P40763 770 aa24.04■■□□□ 1.44
LPCAT3-210ENST00000540090 KCTD2Q14681 263 aa24.04■■□□□ 1.44
LPCAT3-210ENST00000540090 MAFAQ8NHW3 353 aaPredicted RBP24.04■■□□□ 1.44
LPCAT3-210ENST00000540090 BOLA2Q9H3K6 86 aa24.04■■□□□ 1.44
LPCAT3-210ENST00000540090 PPP1R9AQ9ULJ8 1098 aa24.04■■□□□ 1.44
LPCAT3-210ENST00000540090 KIAA0355O15063 1070 aa24.03■■□□□ 1.44
LPCAT3-210ENST00000540090 PGK1P00558 417 aa24.03■■□□□ 1.44
LPCAT3-210ENST00000540090 CLTBP09497 229 aa24.03■■□□□ 1.44
LPCAT3-210ENST00000540090 ZNF865P0CJ78 1059 aaPredicted RBP24.03■■□□□ 1.44
LPCAT3-210ENST00000540090 TAL1P17542 331 aaPredicted RBP24.03■■□□□ 1.44
LPCAT3-210ENST00000540090 ATP5JP18859 108 aa24.03■■□□□ 1.44
LPCAT3-210ENST00000540090 HNRNPUQ00839 825 aaKnown RBP eCLIP24.03■■□□□ 1.44
LPCAT3-210ENST00000540090 AMOTL1Q8IY63 956 aa24.03■■□□□ 1.44
LPCAT3-210ENST00000540090 ZNF214Q9UL59 606 aaPredicted RBP24.03■■□□□ 1.44
LPCAT3-210ENST00000540090 SMCHD1A6NHR9 2005 aa24.02■■□□□ 1.44
LPCAT3-210ENST00000540090 RAB11FIP3O75154 756 aa24.02■■□□□ 1.44
LPCAT3-210ENST00000540090 HMMRO75330 724 aa24.02■■□□□ 1.44
LPCAT3-210ENST00000540090 COPB2P35606 906 aa24.02■■□□□ 1.44
LPCAT3-210ENST00000540090 UBE3CQ15386 1083 aa24.02■■□□□ 1.44
LPCAT3-210ENST00000540090 SIRT2Q8IXJ6 389 aa24.02■■□□□ 1.44
LPCAT3-210ENST00000540090 REPS2Q8NFH8 660 aa24.02■■□□□ 1.44
LPCAT3-210ENST00000540090 MYLIPQ8WY64 445 aa24.02■■□□□ 1.44
LPCAT3-210ENST00000540090 DDX24Q9GZR7 859 aaKnown RBP eCLIP24.02■■□□□ 1.44
LPCAT3-210ENST00000540090 GOPCQ9HD26 462 aa24.02■■□□□ 1.44
LPCAT3-210ENST00000540090 AKR1A1P14550 325 aa24.01■■□□□ 1.43
LPCAT3-210ENST00000540090 EPHB4P54760 987 aa24.01■■□□□ 1.43
LPCAT3-210ENST00000540090 HAUS7Q99871 368 aa24.01■■□□□ 1.43
LPCAT3-210ENST00000540090 ROBO3Q96MS0 1386 aa24.01■■□□□ 1.43
LPCAT3-210ENST00000540090 TMEM265A0A087WTH1 108 aa24■■□□□ 1.43
LPCAT3-210ENST00000540090 A0A1W2PQ45 241 aaPredicted RBP24■■□□□ 1.43
LPCAT3-210ENST00000540090 A0A1W2PQY0 241 aa24■■□□□ 1.43
LPCAT3-210ENST00000540090 CHGBP05060 677 aa24■■□□□ 1.43
LPCAT3-210ENST00000540090 RAG1P15918 1043 aa24■■□□□ 1.43
LPCAT3-210ENST00000540090 CTR9Q6PD62 1173 aa24■■□□□ 1.43
LPCAT3-210ENST00000540090 DDRGK1Q96HY6 314 aa24■■□□□ 1.43
LPCAT3-210ENST00000540090 RNPC3Q96LT9 517 aaKnown RBP24■■□□□ 1.43
LPCAT3-210ENST00000540090 TSEN34Q9BSV6 310 aaKnown RBP24■■□□□ 1.43
LPCAT3-210ENST00000540090 GNL3Q9BVP2 549 aaKnown RBP eCLIP24■■□□□ 1.43
LPCAT3-210ENST00000540090 ZBED9Q6R2W3 1325 aa24■■□□□ 1.43
LPCAT3-210ENST00000540090 SPTBN5Q9NRC6 3674 aaKnown RBP23.99■■□□□ 1.43
LPCAT3-210ENST00000540090 PQBP1O60828 265 aaKnown RBP23.99■■□□□ 1.43
LPCAT3-210ENST00000540090 ADAMTS4O75173 837 aa23.99■■□□□ 1.43
LPCAT3-210ENST00000540090 MS4A1P11836 297 aa23.99■■□□□ 1.43
LPCAT3-210ENST00000540090 FAM83BQ5T0W9 1011 aa23.99■■□□□ 1.43
LPCAT3-210ENST00000540090 ANKRD33Q7Z3H0 272 aa23.99■■□□□ 1.43
LPCAT3-210ENST00000540090 MSL3Q8N5Y2 521 aaKnown RBP23.99■■□□□ 1.43
LPCAT3-210ENST00000540090 TOX2Q96NM4 488 aa23.99■■□□□ 1.43
LPCAT3-210ENST00000540090 BCL11AQ9H165 835 aa23.99■■□□□ 1.43
LPCAT3-210ENST00000540090 ZBTB40Q9NUA8 1239 aa23.99■■□□□ 1.43
LPCAT3-210ENST00000540090 TMEM39AQ9NV64 488 aa23.99■■□□□ 1.43
LPCAT3-210ENST00000540090 CNPY2Q9Y2B0 182 aa23.99■■□□□ 1.43
LPCAT3-210ENST00000540090 SLC4A4Q9Y6R1 1079 aa23.99■■□□□ 1.43
LPCAT3-210ENST00000540090 ZNFX1Q9P2E3 1918 aaKnown RBP23.98■■□□□ 1.43
LPCAT3-210ENST00000540090 FAAP100Q0VG06 881 aa23.97■■□□□ 1.43
LPCAT3-210ENST00000540090 KLHDC9Q8NEP7 349 aa23.97■■□□□ 1.43
LPCAT3-210ENST00000540090 LENG1Q96BZ8 264 aaPredicted RBP23.97■■□□□ 1.43
LPCAT3-210ENST00000540090 RAD21O60216 631 aa23.96■■□□□ 1.43
LPCAT3-210ENST00000540090 SNAI1O95863 264 aaPredicted RBP23.96■■□□□ 1.43
LPCAT3-210ENST00000540090 FOSL2P15408 326 aa23.96■■□□□ 1.43
LPCAT3-210ENST00000540090 ACLYP53396 1101 aa23.96■■□□□ 1.43
LPCAT3-210ENST00000540090 FPGSQ05932 587 aa23.96■■□□□ 1.43
LPCAT3-210ENST00000540090 CCSAPQ6IQ19 270 aaPredicted RBP23.96■■□□□ 1.43
LPCAT3-210ENST00000540090 MAMDC4Q6UXC1 1216 aa23.96■■□□□ 1.43
LPCAT3-210ENST00000540090 NUP133Q8WUM0 1156 aa23.96■■□□□ 1.43
LPCAT3-210ENST00000540090 TEX13BQ9BXU2 312 aa23.96■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms