RNA–Protein interactions for RNA: ENST00000539631.1

TSPAN9-207, Transcript of tetraspanin 9, humanhuman

TSL 3

Gene TSPAN9, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-207ENST00000539631 MCM5P33992 734 aa14.93□□□□□ -0.02
TSPAN9-207ENST00000539631 HERVK_113P62684 666 aa14.93□□□□□ -0.02
TSPAN9-207ENST00000539631 IFIT1BQ5T764 474 aaKnown RBP14.93□□□□□ -0.02
TSPAN9-207ENST00000539631 KAT14Q9H8E8 782 aa14.93□□□□□ -0.02
TSPAN9-207ENST00000539631 SENP2Q9HC62 589 aa14.93□□□□□ -0.02
TSPAN9-207ENST00000539631 GPHNQ9NQX3 736 aaPredicted RBP14.93□□□□□ -0.02
TSPAN9-207ENST00000539631 FBXO28Q9NVF7 368 aa14.93□□□□□ -0.02
TSPAN9-207ENST00000539631 ERICH2A1L162 156 aa14.92□□□□□ -0.02
TSPAN9-207ENST00000539631 PEX10O60683 326 aa14.92□□□□□ -0.02
TSPAN9-207ENST00000539631 FLOT1O75955 427 aa14.92□□□□□ -0.02
TSPAN9-207ENST00000539631 BCRP11274 1271 aa14.92□□□□□ -0.02
TSPAN9-207ENST00000539631 BMP3P12645 472 aa14.92□□□□□ -0.02
TSPAN9-207ENST00000539631 CPA1P15085 419 aa14.92□□□□□ -0.02
TSPAN9-207ENST00000539631 COG2Q14746 738 aa14.92□□□□□ -0.02
TSPAN9-207ENST00000539631 WTAPQ15007 396 aa14.92□□□□□ -0.02
TSPAN9-207ENST00000539631 NOM1Q5C9Z4 860 aaKnown RBP14.92□□□□□ -0.02
TSPAN9-207ENST00000539631 TMEM67Q5HYA8 995 aa14.92□□□□□ -0.02
TSPAN9-207ENST00000539631 POTEEQ6S8J3 1075 aa14.92□□□□□ -0.02
TSPAN9-207ENST00000539631 SAMD1Q6SPF0 538 aaPredicted RBP14.92□□□□□ -0.02
TSPAN9-207ENST00000539631 PNMA1Q8ND90 353 aa14.92□□□□□ -0.02
TSPAN9-207ENST00000539631 IGDCC4Q8TDY8 1250 aa14.92□□□□□ -0.02
TSPAN9-207ENST00000539631 ZNF296Q8WUU4 475 aaPredicted RBP14.92□□□□□ -0.02
TSPAN9-207ENST00000539631 GMCL1Q96IK5 515 aa14.92□□□□□ -0.02
TSPAN9-207ENST00000539631 JAKMIP1Q96N16 626 aaKnown RBP14.92□□□□□ -0.02
TSPAN9-207ENST00000539631 LRRC2Q9BYS8 371 aa14.92□□□□□ -0.02
TSPAN9-207ENST00000539631 ISY1Q9ULR0 285 aaKnown RBP14.92□□□□□ -0.02
TSPAN9-207ENST00000539631 SPDYE16A6NNV3 312 aaPredicted RBP14.91□□□□□ -0.02
TSPAN9-207ENST00000539631 FKTNO75072 461 aa14.91□□□□□ -0.02
TSPAN9-207ENST00000539631 DSG3P32926 999 aa14.91□□□□□ -0.02
TSPAN9-207ENST00000539631 SLC1A4P43007 532 aa14.91□□□□□ -0.02
TSPAN9-207ENST00000539631 GCLCP48506 637 aaPredicted RBP14.91□□□□□ -0.02
TSPAN9-207ENST00000539631 EXOSC10Q01780 885 aaKnown RBP14.91□□□□□ -0.02
TSPAN9-207ENST00000539631 SP3Q02447 781 aa14.91□□□□□ -0.02
TSPAN9-207ENST00000539631 SART3Q15020 963 aaKnown RBP14.91□□□□□ -0.02
TSPAN9-207ENST00000539631 KCTD1Q719H9 257 aa14.91□□□□□ -0.02
TSPAN9-207ENST00000539631 DHX32Q7L7V1 743 aaKnown RBP14.91□□□□□ -0.02
TSPAN9-207ENST00000539631 ANKRD13CQ8N6S4 541 aa14.91□□□□□ -0.02
TSPAN9-207ENST00000539631 DCAF4Q8WV16 495 aa14.91□□□□□ -0.02
TSPAN9-207ENST00000539631 TCEANC2Q96MN5 208 aa14.91□□□□□ -0.02
TSPAN9-207ENST00000539631 TMEM232C9JQI7 657 aa14.9□□□□□ -0.02
TSPAN9-207ENST00000539631 SH2B2O14492 632 aaPredicted RBP14.9□□□□□ -0.02
TSPAN9-207ENST00000539631 CNMDO75829 334 aa14.9□□□□□ -0.02
TSPAN9-207ENST00000539631 ECM2O94769 699 aaPredicted RBP14.9□□□□□ -0.02
TSPAN9-207ENST00000539631 PDHBP11177 359 aa14.9□□□□□ -0.02
TSPAN9-207ENST00000539631 CCDC96Q2M329 555 aa14.9□□□□□ -0.02
TSPAN9-207ENST00000539631 LBX2Q6XYB7 198 aa14.9□□□□□ -0.02
TSPAN9-207ENST00000539631 ATG4CQ96DT6 458 aa14.9□□□□□ -0.02
TSPAN9-207ENST00000539631 TMEM87BQ96K49 555 aa14.9□□□□□ -0.02
TSPAN9-207ENST00000539631 MTA3Q9BTC8 594 aa14.9□□□□□ -0.02
TSPAN9-207ENST00000539631 PAGR1Q9BTK6 254 aa14.9□□□□□ -0.02
TSPAN9-207ENST00000539631 LY9Q9HBG7 655 aa14.9□□□□□ -0.02
TSPAN9-207ENST00000539631 TXNRD2Q9NNW7 524 aa14.9□□□□□ -0.02
TSPAN9-207ENST00000539631 HOXC10Q9NYD6 342 aa14.9□□□□□ -0.02
TSPAN9-207ENST00000539631 RBPJLQ9UBG7 517 aa14.9□□□□□ -0.02
TSPAN9-207ENST00000539631 PPP1R9AQ9ULJ8 1098 aa14.9□□□□□ -0.02
TSPAN9-207ENST00000539631 FRMPD2Q68DX3 1309 aaPredicted RBP14.9□□□□□ -0.02
TSPAN9-207ENST00000539631 MYPNQ86TC9 1320 aa14.9□□□□□ -0.02
TSPAN9-207ENST00000539631 WDR19Q8NEZ3 1342 aa14.9□□□□□ -0.02
TSPAN9-207ENST00000539631 HMGB1P09429 215 aaKnown RBP14.89□□□□□ -0.03
TSPAN9-207ENST00000539631 SNHG28P0DPA3 235 aa14.89□□□□□ -0.03
TSPAN9-207ENST00000539631 CAP1Q01518 475 aa14.89□□□□□ -0.03
TSPAN9-207ENST00000539631 Q3C1V9 767 aa14.89□□□□□ -0.03
TSPAN9-207ENST00000539631 TTBK2Q6IQ55 1244 aa14.89□□□□□ -0.03
TSPAN9-207ENST00000539631 BLOC1S2Q6QNY1 142 aa14.89□□□□□ -0.03
TSPAN9-207ENST00000539631 CD99L2Q8TCZ2 262 aa14.89□□□□□ -0.03
TSPAN9-207ENST00000539631 GTF3C2Q8WUA4 911 aaPredicted RBP14.89□□□□□ -0.03
TSPAN9-207ENST00000539631 SLF1Q9BQI6 1058 aa14.89□□□□□ -0.03
TSPAN9-207ENST00000539631 GPCPD1Q9NPB8 672 aa14.89□□□□□ -0.03
TSPAN9-207ENST00000539631 BTBD7Q9P203 1132 aa14.89□□□□□ -0.03
TSPAN9-207ENST00000539631 MORF4L1Q9UBU8 362 aa14.89□□□□□ -0.03
TSPAN9-207ENST00000539631 FEM1BQ9UK73 627 aa14.89□□□□□ -0.03
TSPAN9-207ENST00000539631 GOLGA8HP0CJ92 632 aa14.88□□□□□ -0.03
TSPAN9-207ENST00000539631 CASTP20810 708 aaKnown RBP14.88□□□□□ -0.03
TSPAN9-207ENST00000539631 RPS6KB1P23443 525 aa14.88□□□□□ -0.03
TSPAN9-207ENST00000539631 PSMA5P28066 241 aa14.88□□□□□ -0.03
TSPAN9-207ENST00000539631 LIFRP42702 1097 aa14.88□□□□□ -0.03
TSPAN9-207ENST00000539631 ZNF543Q08ER8 600 aa14.88□□□□□ -0.03
TSPAN9-207ENST00000539631 IKQ13123 557 aaPredicted RBP14.88□□□□□ -0.03
TSPAN9-207ENST00000539631 FAM110CQ1W6H9 321 aa14.88□□□□□ -0.03
TSPAN9-207ENST00000539631 KIFC2Q96AC6 838 aa14.88□□□□□ -0.03
TSPAN9-207ENST00000539631 PRDM10Q9NQV6 1147 aa14.88□□□□□ -0.03
TSPAN9-207ENST00000539631 ADAMTS5Q9UNA0 930 aa14.88□□□□□ -0.03
TSPAN9-207ENST00000539631 RABGAP1Q9Y3P9 1069 aa14.88□□□□□ -0.03
TSPAN9-207ENST00000539631 VWA5AO00534 786 aa14.87□□□□□ -0.03
TSPAN9-207ENST00000539631 PLA2G6O60733 806 aa14.87□□□□□ -0.03
TSPAN9-207ENST00000539631 CTGFP29279 349 aa14.87□□□□□ -0.03
TSPAN9-207ENST00000539631 SLC16A2P36021 539 aa14.87□□□□□ -0.03
TSPAN9-207ENST00000539631 STAT2P52630 851 aa14.87□□□□□ -0.03
TSPAN9-207ENST00000539631 ERVK-9P63128 1117 aa14.87□□□□□ -0.03
TSPAN9-207ENST00000539631 ERVK-24P63145 666 aa14.87□□□□□ -0.03
TSPAN9-207ENST00000539631 LACTBP83111 547 aaPredicted RBP14.87□□□□□ -0.03
TSPAN9-207ENST00000539631 NFXL1Q6ZNB6 911 aa14.87□□□□□ -0.03
TSPAN9-207ENST00000539631 Q6ZUG5 572 aa14.87□□□□□ -0.03
TSPAN9-207ENST00000539631 RUFY3Q7L099 469 aa14.87□□□□□ -0.03
TSPAN9-207ENST00000539631 FAM160B2Q86V87 743 aa14.87□□□□□ -0.03
TSPAN9-207ENST00000539631 ZNF654Q8IZM8 581 aa14.87□□□□□ -0.03
TSPAN9-207ENST00000539631 PRPF38AQ8NAV1 312 aaKnown RBP14.87□□□□□ -0.03
TSPAN9-207ENST00000539631 GPRC5AQ8NFJ5 357 aa14.87□□□□□ -0.03
TSPAN9-207ENST00000539631 CHURC1Q8WUH1 139 aa14.87□□□□□ -0.03
TSPAN9-207ENST00000539631 ERO1AQ96HE7 468 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms