RNA–Protein interactions for RNA: ENST00000539204.5

YBX3-207, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 649 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-207ENST00000539204 FGBP02675 491 aa14.72□□□□□ -0.05
YBX3-207ENST00000539204 ZNF865P0CJ78 1059 aaPredicted RBP14.72□□□□□ -0.05
YBX3-207ENST00000539204 TAL1P17542 331 aaPredicted RBP14.72□□□□□ -0.05
YBX3-207ENST00000539204 USP5P45974 858 aa14.72□□□□□ -0.05
YBX3-207ENST00000539204 DYNLL1P63167 89 aaKnown RBP14.72□□□□□ -0.05
YBX3-207ENST00000539204 KLHDC9Q8NEP7 349 aa14.72□□□□□ -0.05
YBX3-207ENST00000539204 GLT1D1Q96MS3 346 aa14.72□□□□□ -0.05
YBX3-207ENST00000539204 CNPY2Q9Y2B0 182 aa14.72□□□□□ -0.05
YBX3-207ENST00000539204 ZNF521Q96K83 1311 aa14.71□□□□□ -0.05
YBX3-207ENST00000539204 PGK2P07205 417 aa14.71□□□□□ -0.05
YBX3-207ENST00000539204 CDK7P50613 346 aa14.71□□□□□ -0.05
YBX3-207ENST00000539204 SEPT2Q15019 361 aa14.71□□□□□ -0.05
YBX3-207ENST00000539204 CDCA7LQ96GN5 454 aa14.71□□□□□ -0.05
YBX3-207ENST00000539204 MMP19Q99542 508 aa14.71□□□□□ -0.05
YBX3-207ENST00000539204 PPP1R12CQ9BZL4 782 aa14.71□□□□□ -0.05
YBX3-207ENST00000539204 IL23AQ9NPF7 189 aa14.71□□□□□ -0.05
YBX3-207ENST00000539204 FAM184BQ9ULE4 1060 aa14.71□□□□□ -0.05
YBX3-207ENST00000539204 DIS3Q9Y2L1 958 aaKnown RBP14.71□□□□□ -0.05
YBX3-207ENST00000539204 YBX2Q9Y2T7 364 aaKnown RBP14.71□□□□□ -0.05
YBX3-207ENST00000539204 TLR3O15455 904 aaKnown RBP14.7□□□□□ -0.06
YBX3-207ENST00000539204 FLOT1O75955 427 aa14.7□□□□□ -0.06
YBX3-207ENST00000539204 CYP2E1P05181 493 aaPredicted RBP14.7□□□□□ -0.06
YBX3-207ENST00000539204 GUCY1A2P33402 732 aa14.7□□□□□ -0.06
YBX3-207ENST00000539204 G3BP1Q13283 466 aaKnown RBP eCLIP14.7□□□□□ -0.06
YBX3-207ENST00000539204 KCTD2Q14681 263 aa14.7□□□□□ -0.06
YBX3-207ENST00000539204 ZNF792Q3KQV3 632 aa14.7□□□□□ -0.06
YBX3-207ENST00000539204 CCDC158Q5M9N0 1113 aa14.7□□□□□ -0.06
YBX3-207ENST00000539204 TTC39AQ5SRH9 613 aa14.7□□□□□ -0.06
YBX3-207ENST00000539204 CCSAPQ6IQ19 270 aaPredicted RBP14.7□□□□□ -0.06
YBX3-207ENST00000539204 CERS3Q8IU89 383 aa14.7□□□□□ -0.06
YBX3-207ENST00000539204 PCSK9Q8NBP7 692 aaKnown RBP14.7□□□□□ -0.06
YBX3-207ENST00000539204 COG5Q9UP83 839 aa14.7□□□□□ -0.06
YBX3-207ENST00000539204 ZNF236Q9UL36 1845 aa14.69□□□□□ -0.06
YBX3-207ENST00000539204 MUC6Q6W4X9 2439 aa14.69□□□□□ -0.06
YBX3-207ENST00000539204 A0A1W2PRG0 241 aa14.69□□□□□ -0.06
YBX3-207ENST00000539204 ARVCFO00192 962 aa14.69□□□□□ -0.06
YBX3-207ENST00000539204 MPHOSPH10O00566 681 aaKnown RBP14.69□□□□□ -0.06
YBX3-207ENST00000539204 TLL1O43897 1013 aa14.69□□□□□ -0.06
YBX3-207ENST00000539204 CYP7A1P22680 504 aa14.69□□□□□ -0.06
YBX3-207ENST00000539204 SHMT1P34896 483 aa14.69□□□□□ -0.06
YBX3-207ENST00000539204 ALDH1L2Q3SY69 923 aa14.69□□□□□ -0.06
YBX3-207ENST00000539204 PPP2R2DQ66LE6 453 aa14.69□□□□□ -0.06
YBX3-207ENST00000539204 LENG1Q96BZ8 264 aaPredicted RBP14.69□□□□□ -0.06
YBX3-207ENST00000539204 ATG4CQ96DT6 458 aa14.69□□□□□ -0.06
YBX3-207ENST00000539204 SYNRGQ9UMZ2 1314 aa14.68□□□□□ -0.06
YBX3-207ENST00000539204 CHD7Q9P2D1 2997 aa14.68□□□□□ -0.06
YBX3-207ENST00000539204 A0A0U1RQG5 324 aaPredicted RBP14.68□□□□□ -0.06
YBX3-207ENST00000539204 GTPBP6O43824 516 aaPredicted RBP14.68□□□□□ -0.06
YBX3-207ENST00000539204 CYP2C18P33260 490 aa14.68□□□□□ -0.06
YBX3-207ENST00000539204 SAMD1Q6SPF0 538 aaPredicted RBP14.68□□□□□ -0.06
YBX3-207ENST00000539204 OTOP2Q7RTS6 562 aa14.68□□□□□ -0.06
YBX3-207ENST00000539204 MIGA1Q8NAN2 632 aa14.68□□□□□ -0.06
YBX3-207ENST00000539204 MEIS3Q99687 375 aa14.68□□□□□ -0.06
YBX3-207ENST00000539204 SPC25Q9HBM1 224 aa14.68□□□□□ -0.06
YBX3-207ENST00000539204 REV3LO60673 3130 aa14.68□□□□□ -0.06
YBX3-207ENST00000539204 DUSP11O75319 330 aaKnown RBP14.67□□□□□ -0.06
YBX3-207ENST00000539204 ASGR1P07306 291 aa14.67□□□□□ -0.06
YBX3-207ENST00000539204 POU3F3P20264 500 aaPredicted RBP14.67□□□□□ -0.06
YBX3-207ENST00000539204 PLCD1P51178 756 aa14.67□□□□□ -0.06
YBX3-207ENST00000539204 RABGGTBP53611 331 aa14.67□□□□□ -0.06
YBX3-207ENST00000539204 TMEM132BQ14DG7 1078 aa14.67□□□□□ -0.06
YBX3-207ENST00000539204 C11orf16Q9NQ32 467 aa14.67□□□□□ -0.06
YBX3-207ENST00000539204 SMC4Q9NTJ3 1288 aa14.67□□□□□ -0.06
YBX3-207ENST00000539204 PCDHA11Q9Y5I1 949 aa14.67□□□□□ -0.06
YBX3-207ENST00000539204 SLC4A7Q9Y6M7 1214 aa14.67□□□□□ -0.06
YBX3-207ENST00000539204 ROBO3Q96MS0 1386 aa14.67□□□□□ -0.06
YBX3-207ENST00000539204 FAM86C2PA6NEL3 165 aa14.66□□□□□ -0.06
YBX3-207ENST00000539204 SMIM22K7EJ46 135 aa14.66□□□□□ -0.06
YBX3-207ENST00000539204 POLR3DP05423 398 aaPredicted RBP14.66□□□□□ -0.06
YBX3-207ENST00000539204 C6orf222P0C671 652 aaPredicted RBP14.66□□□□□ -0.06
YBX3-207ENST00000539204 MTX1Q13505 466 aa14.66□□□□□ -0.06
YBX3-207ENST00000539204 KIAA1755Q5JYT7 1200 aa14.66□□□□□ -0.06
YBX3-207ENST00000539204 RIOX2Q8IUF8 465 aa14.66□□□□□ -0.06
YBX3-207ENST00000539204 FAM126BQ8IXS8 530 aa14.66□□□□□ -0.06
YBX3-207ENST00000539204 MSL3Q8N5Y2 521 aaKnown RBP14.66□□□□□ -0.06
YBX3-207ENST00000539204 HLA-CQ95604 372 aa14.66□□□□□ -0.06
YBX3-207ENST00000539204 NOB1Q9ULX3 412 aaKnown RBP14.66□□□□□ -0.06
YBX3-207ENST00000539204 MTCH2Q9Y6C9 303 aa14.66□□□□□ -0.06
YBX3-207ENST00000539204 ZNFX1Q9P2E3 1918 aaKnown RBP14.65□□□□□ -0.06
YBX3-207ENST00000539204 MYADML2A6NDP7 307 aa14.65□□□□□ -0.06
YBX3-207ENST00000539204 PI4K2BG5E9Z4 385 aa14.65□□□□□ -0.06
YBX3-207ENST00000539204 GNAI3P08754 354 aa14.65□□□□□ -0.06
YBX3-207ENST00000539204 MYOGP15173 224 aa14.65□□□□□ -0.06
YBX3-207ENST00000539204 CST5P28325 142 aaPredicted RBP14.65□□□□□ -0.06
YBX3-207ENST00000539204 STAT3P40763 770 aa14.65□□□□□ -0.06
YBX3-207ENST00000539204 ZAP70P43403 619 aa14.65□□□□□ -0.06
YBX3-207ENST00000539204 GNASQ5JWF2 1037 aa14.65□□□□□ -0.06
YBX3-207ENST00000539204 RPUSD2Q8IZ73 545 aaKnown RBP14.65□□□□□ -0.06
YBX3-207ENST00000539204 SPICE1Q8N0Z3 855 aa14.65□□□□□ -0.06
YBX3-207ENST00000539204 SNX27Q96L92 541 aa14.65□□□□□ -0.06
YBX3-207ENST00000539204 API5Q9BZZ5 524 aaKnown RBP14.65□□□□□ -0.06
YBX3-207ENST00000539204 PIH1D3Q9NQM4 214 aaKnown RBP14.65□□□□□ -0.06
YBX3-207ENST00000539204 ZHX1Q9UKY1 873 aaPredicted RBP14.65□□□□□ -0.06
YBX3-207ENST00000539204 RFXAPO00287 272 aa14.64□□□□□ -0.07
YBX3-207ENST00000539204 IDH1O75874 414 aaKnown RBP14.64□□□□□ -0.07
YBX3-207ENST00000539204 SNAI1O95863 264 aaPredicted RBP14.64□□□□□ -0.07
YBX3-207ENST00000539204 CD4P01730 458 aa14.64□□□□□ -0.07
YBX3-207ENST00000539204 MRE11P49959 708 aa14.64□□□□□ -0.07
YBX3-207ENST00000539204 KHSRPQ92945 711 aaKnown RBP eCLIP14.64□□□□□ -0.072e-7■■□□□ 13.3
YBX3-207ENST00000539204 ZNF512BQ96KM6 892 aaPredicted RBP14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms