RNA–Protein interactions for RNA: ENST00000539148.3

CLPB-210, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 5

Gene CLPB, Length 564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-210ENST00000539148 CTDP1Q9Y5B0 961 aaPredicted RBP11.9□□□□□ -0.5
CLPB-210ENST00000539148 LOC285556D6RIA3 1793 aa11.9□□□□□ -0.51
CLPB-210ENST00000539148 PLA2G6O60733 806 aa11.89□□□□□ -0.51
CLPB-210ENST00000539148 PDIA3P30101 505 aaKnown RBP11.89□□□□□ -0.51
CLPB-210ENST00000539148 TROAPQ12815 778 aa11.89□□□□□ -0.51
CLPB-210ENST00000539148 NOGQ13253 232 aa11.89□□□□□ -0.51
CLPB-210ENST00000539148 MTMR2Q13614 643 aa11.89□□□□□ -0.51
CLPB-210ENST00000539148 DEFB115Q30KQ5 88 aa11.89□□□□□ -0.51
CLPB-210ENST00000539148 SPRYD7Q5W111 196 aa11.89□□□□□ -0.51
CLPB-210ENST00000539148 DLK2Q6UY11 383 aa11.89□□□□□ -0.51
CLPB-210ENST00000539148 MOB2Q70IA6 237 aa11.89□□□□□ -0.51
CLPB-210ENST00000539148 GTF3C2Q8WUA4 911 aaPredicted RBP11.89□□□□□ -0.51
CLPB-210ENST00000539148 WASF1Q92558 559 aa11.89□□□□□ -0.51
CLPB-210ENST00000539148 WNK4Q96J92 1243 aa11.89□□□□□ -0.51
CLPB-210ENST00000539148 CLMNQ96JQ2 1002 aa11.89□□□□□ -0.51
CLPB-210ENST00000539148 LLPHQ9BRT6 129 aaKnown RBP11.89□□□□□ -0.51
CLPB-210ENST00000539148 ZCCHC17Q9NP64 241 aaKnown RBP11.89□□□□□ -0.51
CLPB-210ENST00000539148 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.89□□□□□ -0.51
CLPB-210ENST00000539148 FEM1BQ9UK73 627 aa11.89□□□□□ -0.51
CLPB-210ENST00000539148 MYPNQ86TC9 1320 aa11.88□□□□□ -0.51
CLPB-210ENST00000539148 A0A0G2JLL6 359 aaPredicted RBP11.88□□□□□ -0.51
CLPB-210ENST00000539148 USP17L15C9J2P7 530 aa11.88□□□□□ -0.51
CLPB-210ENST00000539148 USP17L13C9JLJ4 530 aa11.88□□□□□ -0.51
CLPB-210ENST00000539148 USP17L11C9JVI0 530 aa11.88□□□□□ -0.51
CLPB-210ENST00000539148 USP17L18D6R9N7 530 aa11.88□□□□□ -0.51
CLPB-210ENST00000539148 USP17L22D6RA61 530 aa11.88□□□□□ -0.51
CLPB-210ENST00000539148 USP17L17D6RBQ6 530 aa11.88□□□□□ -0.51
CLPB-210ENST00000539148 USP17L19D6RCP7 530 aa11.88□□□□□ -0.51
CLPB-210ENST00000539148 USP17L20D6RJB6 530 aa11.88□□□□□ -0.51
CLPB-210ENST00000539148 IRF6O14896 467 aa11.88□□□□□ -0.51
CLPB-210ENST00000539148 PFKFB2O60825 505 aa11.88□□□□□ -0.51
CLPB-210ENST00000539148 SLURP2P0DP57 97 aa11.88□□□□□ -0.51
CLPB-210ENST00000539148 PDHBP11177 359 aa11.88□□□□□ -0.51
CLPB-210ENST00000539148 OSBPP22059 807 aa11.88□□□□□ -0.51
CLPB-210ENST00000539148 STAT2P52630 851 aa11.88□□□□□ -0.51
CLPB-210ENST00000539148 HMGN5P82970 282 aaKnown RBP11.88□□□□□ -0.51
CLPB-210ENST00000539148 USP17L24Q0WX57 530 aa11.88□□□□□ -0.51
CLPB-210ENST00000539148 GRM4Q14833 912 aa11.88□□□□□ -0.51
CLPB-210ENST00000539148 NFKBIBQ15653 356 aa11.88□□□□□ -0.51
CLPB-210ENST00000539148 PRRT2Q7Z6L0 340 aaPredicted RBP11.88□□□□□ -0.51
CLPB-210ENST00000539148 HOXC10Q9NYD6 342 aa11.88□□□□□ -0.51
CLPB-210ENST00000539148 SEC63Q9UGP8 760 aaKnown RBP11.88□□□□□ -0.51
CLPB-210ENST00000539148 FZD1Q9UP38 647 aa11.88□□□□□ -0.51
CLPB-210ENST00000539148 SLC45A1Q9Y2W3 748 aa11.88□□□□□ -0.51
CLPB-210ENST00000539148 NID2Q14112 1375 aa11.88□□□□□ -0.51
CLPB-210ENST00000539148 KLRF2D3W0D1 207 aa11.87□□□□□ -0.51
CLPB-210ENST00000539148 NDUFB10O96000 172 aa11.87□□□□□ -0.51
CLPB-210ENST00000539148 ALDH1A1P00352 501 aa11.87□□□□□ -0.51
CLPB-210ENST00000539148 SLC10A3P09131 477 aa11.87□□□□□ -0.51
CLPB-210ENST00000539148 SNHG28P0DPA3 235 aa11.87□□□□□ -0.51
CLPB-210ENST00000539148 XBP1P17861 261 aa11.87□□□□□ -0.51
CLPB-210ENST00000539148 HMGCS2P54868 508 aa11.87□□□□□ -0.51
CLPB-210ENST00000539148 IRX3P78415 501 aaPredicted RBP11.87□□□□□ -0.51
CLPB-210ENST00000539148 JAG1P78504 1218 aa11.87□□□□□ -0.51
CLPB-210ENST00000539148 NUCB2P80303 420 aa11.87□□□□□ -0.51
CLPB-210ENST00000539148 FMR1Q06787 632 aaKnown RBP eCLIP11.87□□□□□ -0.51
CLPB-210ENST00000539148 ZNF543Q08ER8 600 aa11.87□□□□□ -0.51
CLPB-210ENST00000539148 ZYXQ15942 572 aaKnown RBP11.87□□□□□ -0.51
CLPB-210ENST00000539148 GADL1Q6ZQY3 521 aa11.87□□□□□ -0.51
CLPB-210ENST00000539148 NOL8Q76FK4 1167 aaKnown RBP11.87□□□□□ -0.51
CLPB-210ENST00000539148 SIAH1Q8IUQ4 282 aa11.87□□□□□ -0.51
CLPB-210ENST00000539148 FAM177A1Q8N128 213 aaPredicted RBP11.87□□□□□ -0.51
CLPB-210ENST00000539148 PRPF38AQ8NAV1 312 aaKnown RBP11.87□□□□□ -0.51
CLPB-210ENST00000539148 ACER1Q8TDN7 264 aa11.87□□□□□ -0.51
CLPB-210ENST00000539148 GTF3C6Q969F1 213 aa11.87□□□□□ -0.51
CLPB-210ENST00000539148 INTS4Q96HW7 963 aaKnown RBP11.87□□□□□ -0.51
CLPB-210ENST00000539148 TMX3Q96JJ7 454 aa11.87□□□□□ -0.51
CLPB-210ENST00000539148 TANGO6Q9C0B7 1094 aa11.87□□□□□ -0.51
CLPB-210ENST00000539148 BRPF3Q9ULD4 1205 aa11.87□□□□□ -0.51
CLPB-210ENST00000539148 TPCN1Q9ULQ1 816 aa11.87□□□□□ -0.51
CLPB-210ENST00000539148 MTMR7Q9Y216 660 aa11.87□□□□□ -0.51
CLPB-210ENST00000539148 CCL15-CCL14A0A0B4J2E2 113 aa11.86□□□□□ -0.51
CLPB-210ENST00000539148 A0A1W2PRG0 241 aa11.86□□□□□ -0.51
CLPB-210ENST00000539148 PALM3A6NDB9 673 aaPredicted RBP11.86□□□□□ -0.51
CLPB-210ENST00000539148 RASSF10A6NK89 507 aa11.86□□□□□ -0.51
CLPB-210ENST00000539148 DDX11L8A8MPP1 907 aa11.86□□□□□ -0.51
CLPB-210ENST00000539148 hCG_1984214I3L0E3 225 aa11.86□□□□□ -0.51
CLPB-210ENST00000539148 VCAM1P19320 739 aa11.86□□□□□ -0.51
CLPB-210ENST00000539148 PDCP20941 246 aa11.86□□□□□ -0.51
CLPB-210ENST00000539148 SLC4A3P48751 1232 aa11.86□□□□□ -0.51
CLPB-210ENST00000539148 HTRA3P83110 453 aa11.86□□□□□ -0.51
CLPB-210ENST00000539148 STK3Q13188 491 aa11.86□□□□□ -0.51
CLPB-210ENST00000539148 COG2Q14746 738 aa11.86□□□□□ -0.51
CLPB-210ENST00000539148 CCL15Q16663 113 aa11.86□□□□□ -0.51
CLPB-210ENST00000539148 CLEC10AQ8IUN9 316 aa11.86□□□□□ -0.51
CLPB-210ENST00000539148 ZNF713Q8N859 430 aaPredicted RBP11.86□□□□□ -0.51
CLPB-210ENST00000539148 RRP36Q96EU6 259 aaKnown RBP11.86□□□□□ -0.51
CLPB-210ENST00000539148 GBP4Q96PP9 640 aa11.86□□□□□ -0.51
CLPB-210ENST00000539148 SPZ1Q9BXG8 430 aa11.86□□□□□ -0.51
CLPB-210ENST00000539148 AGTPBP1Q9UPW5 1226 aa11.86□□□□□ -0.51
CLPB-210ENST00000539148 TMEM232C9JQI7 657 aa11.85□□□□□ -0.51
CLPB-210ENST00000539148 ZBED4O75132 1171 aa11.85□□□□□ -0.51
CLPB-210ENST00000539148 FLOT1O75955 427 aa11.85□□□□□ -0.51
CLPB-210ENST00000539148 IFNAR1P17181 557 aa11.85□□□□□ -0.51
CLPB-210ENST00000539148 HOXA7P31268 230 aaPredicted RBP11.85□□□□□ -0.51
CLPB-210ENST00000539148 SSRP1Q08945 709 aaKnown RBP11.85□□□□□ -0.51
CLPB-210ENST00000539148 NBR1Q14596 966 aa11.85□□□□□ -0.51
CLPB-210ENST00000539148 ME3Q16798 604 aa11.85□□□□□ -0.51
CLPB-210ENST00000539148 FAM83BQ5T0W9 1011 aa11.85□□□□□ -0.51
CLPB-210ENST00000539148 ANKRD23Q86SG2 305 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms