RNA–Protein interactions for RNA: ENST00000538998.1

PBX3-212, Transcript of PBX homeobox 3, humanhuman

TSL 2

Gene PBX3, Length 1,035 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-212ENST00000538998 TMX2Q9Y320 296 aa17.1■□□□□ 0.33
PBX3-212ENST00000538998 WDR46O15213 610 aaKnown RBP17.09■□□□□ 0.33
PBX3-212ENST00000538998 COL9A1P20849 921 aa17.09■□□□□ 0.33
PBX3-212ENST00000538998 ICA1Q05084 483 aa17.09■□□□□ 0.33
PBX3-212ENST00000538998 KCTD2Q14681 263 aa17.09■□□□□ 0.33
PBX3-212ENST00000538998 TMEM132BQ14DG7 1078 aa17.09■□□□□ 0.33
PBX3-212ENST00000538998 TTF1Q15361 905 aaPredicted RBP17.09■□□□□ 0.33
PBX3-212ENST00000538998 SPICE1Q8N0Z3 855 aa17.09■□□□□ 0.33
PBX3-212ENST00000538998 NUP133Q8WUM0 1156 aa17.09■□□□□ 0.33
PBX3-212ENST00000538998 TIFAQ96CG3 184 aa17.09■□□□□ 0.33
PBX3-212ENST00000538998 VCPKMTQ9H867 229 aa17.09■□□□□ 0.33
PBX3-212ENST00000538998 NAV1Q8NEY1 1877 aa17.09■□□□□ 0.33
PBX3-212ENST00000538998 PGK2P07205 417 aa17.08■□□□□ 0.32
PBX3-212ENST00000538998 COPB2P35606 906 aa17.08■□□□□ 0.32
PBX3-212ENST00000538998 FAAP100Q0VG06 881 aa17.08■□□□□ 0.32
PBX3-212ENST00000538998 CCDC174Q6PII3 467 aa17.08■□□□□ 0.32
PBX3-212ENST00000538998 SAMD1Q6SPF0 538 aaPredicted RBP17.08■□□□□ 0.32
PBX3-212ENST00000538998 RIOX2Q8IUF8 465 aa17.08■□□□□ 0.32
PBX3-212ENST00000538998 SLC44A5Q8NCS7 719 aa17.08■□□□□ 0.32
PBX3-212ENST00000538998 GAS2L1Q99501 681 aaPredicted RBP17.08■□□□□ 0.32
PBX3-212ENST00000538998 STARD7Q9NQZ5 370 aa17.08■□□□□ 0.32
PBX3-212ENST00000538998 CNPY2Q9Y2B0 182 aa17.08■□□□□ 0.32
PBX3-212ENST00000538998 MOXD2PA6NHM9 499 aa17.07■□□□□ 0.32
PBX3-212ENST00000538998 ADAMTS4O75173 837 aa17.07■□□□□ 0.32
PBX3-212ENST00000538998 ZNF865P0CJ78 1059 aaPredicted RBP17.07■□□□□ 0.32
PBX3-212ENST00000538998 PDE6AP16499 860 aa17.07■□□□□ 0.32
PBX3-212ENST00000538998 TAL1P17542 331 aaPredicted RBP17.07■□□□□ 0.32
PBX3-212ENST00000538998 ACLYP53396 1101 aa17.07■□□□□ 0.32
PBX3-212ENST00000538998 EVX2Q03828 476 aa17.07■□□□□ 0.32
PBX3-212ENST00000538998 ZNF792Q3KQV3 632 aa17.07■□□□□ 0.32
PBX3-212ENST00000538998 SLC9C2Q5TAH2 1124 aa17.07■□□□□ 0.32
PBX3-212ENST00000538998 ZKSCAN2Q63HK3 967 aa17.07■□□□□ 0.32
PBX3-212ENST00000538998 ATXN2LQ8WWM7 1075 aaKnown RBP17.07■□□□□ 0.32
PBX3-212ENST00000538998 C1orf115Q9H7X2 142 aa17.07■□□□□ 0.32
PBX3-212ENST00000538998 DCP1AQ9NPI6 582 aaPredicted RBP17.07■□□□□ 0.32
PBX3-212ENST00000538998 ADAMTS5Q9UNA0 930 aa17.07■□□□□ 0.32
PBX3-212ENST00000538998 MROH7Q68CQ1 1323 aa17.06■□□□□ 0.32
PBX3-212ENST00000538998 TIMP1P01033 207 aa17.06■□□□□ 0.32
PBX3-212ENST00000538998 AACSQ86V21 672 aa17.06■□□□□ 0.32
PBX3-212ENST00000538998 ERC1Q8IUD2 1116 aa17.06■□□□□ 0.32
PBX3-212ENST00000538998 CLEC10AQ8IUN9 316 aa17.06■□□□□ 0.32
PBX3-212ENST00000538998 SIAH1Q8IUQ4 282 aa17.06■□□□□ 0.32
PBX3-212ENST00000538998 MSL3Q8N5Y2 521 aaKnown RBP17.06■□□□□ 0.32
PBX3-212ENST00000538998 SDR42E1Q8WUS8 393 aa17.06■□□□□ 0.32
PBX3-212ENST00000538998 CCDC17Q96LX7 622 aa17.06■□□□□ 0.32
PBX3-212ENST00000538998 SYNRGQ9UMZ2 1314 aa17.05■□□□□ 0.32
PBX3-212ENST00000538998 CYP2D6P10635 497 aa17.05■□□□□ 0.32
PBX3-212ENST00000538998 AKR1B1P15121 316 aa17.05■□□□□ 0.32
PBX3-212ENST00000538998 STAT3P40763 770 aa17.05■□□□□ 0.32
PBX3-212ENST00000538998 PPIGQ13427 754 aaKnown RBP eCLIP17.05■□□□□ 0.32
PBX3-212ENST00000538998 AKNAD1Q5T1N1 836 aa17.05■□□□□ 0.32
PBX3-212ENST00000538998 MFSD5Q6N075 450 aa17.05■□□□□ 0.32
PBX3-212ENST00000538998 LENG1Q96BZ8 264 aaPredicted RBP17.05■□□□□ 0.32
PBX3-212ENST00000538998 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.05■□□□□ 0.32
PBX3-212ENST00000538998 TBX21Q9UL17 535 aa17.05■□□□□ 0.32
PBX3-212ENST00000538998 ZNF532Q9HCE3 1301 aa17.04■□□□□ 0.32
PBX3-212ENST00000538998 VWA5AO00534 786 aa17.04■□□□□ 0.32
PBX3-212ENST00000538998 CCDC129Q6ZRS4 1044 aa17.04■□□□□ 0.32
PBX3-212ENST00000538998 LCORLQ8N3X6 602 aa17.04■□□□□ 0.32
PBX3-212ENST00000538998 DYNLL2Q96FJ2 89 aa17.04■□□□□ 0.32
PBX3-212ENST00000538998 THEGQ9P2T0 379 aa17.04■□□□□ 0.32
PBX3-212ENST00000538998 ZNF214Q9UL59 606 aaPredicted RBP17.04■□□□□ 0.32
PBX3-212ENST00000538998 FAM184BQ9ULE4 1060 aa17.04■□□□□ 0.32
PBX3-212ENST00000538998 PPP1R9AQ9ULJ8 1098 aa17.04■□□□□ 0.32
PBX3-212ENST00000538998 ELP1O95163 1332 aa17.03■□□□□ 0.32
PBX3-212ENST00000538998 SYNGAP1Q96PV0 1343 aa17.03■□□□□ 0.32
PBX3-212ENST00000538998 KCNA10Q16322 511 aa17.03■□□□□ 0.32
PBX3-212ENST00000538998 KLHDC9Q8NEP7 349 aa17.03■□□□□ 0.32
PBX3-212ENST00000538998 GLT1D1Q96MS3 346 aa17.03■□□□□ 0.32
PBX3-212ENST00000538998 ASB2Q96Q27 587 aa17.03■□□□□ 0.32
PBX3-212ENST00000538998 PBX4Q9BYU1 374 aa17.03■□□□□ 0.32
PBX3-212ENST00000538998 GOPCQ9HD26 462 aa17.03■□□□□ 0.32
PBX3-212ENST00000538998 FBXO28Q9NVF7 368 aa17.03■□□□□ 0.32
PBX3-212ENST00000538998 MUC3AQ02505 3323 aa17.03■□□□□ 0.32
PBX3-212ENST00000538998 TCRBV5S4A2TA0A5A2 114 aa17.02■□□□□ 0.32
PBX3-212ENST00000538998 CST5P28325 142 aaPredicted RBP17.02■□□□□ 0.32
PBX3-212ENST00000538998 TMEM240Q5SV17 173 aa17.02■□□□□ 0.32
PBX3-212ENST00000538998 RASIP1Q5U651 963 aa17.02■□□□□ 0.32
PBX3-212ENST00000538998 CCSAPQ6IQ19 270 aaPredicted RBP17.02■□□□□ 0.32
PBX3-212ENST00000538998 PSRC1Q6PGN9 363 aaPredicted RBP17.02■□□□□ 0.32
PBX3-212ENST00000538998 AMOTL1Q8IY63 956 aa17.02■□□□□ 0.32
PBX3-212ENST00000538998 FTSJ3Q8IY81 847 aaKnown RBP17.02■□□□□ 0.32
PBX3-212ENST00000538998 TMEM199Q8N511 208 aa17.02■□□□□ 0.32
PBX3-212ENST00000538998 PPM1EQ8WY54 764 aa17.02■□□□□ 0.32
PBX3-212ENST00000538998 KANSL2Q9H9L4 492 aa17.02■□□□□ 0.32
PBX3-212ENST00000538998 ATP8A2Q9NTI2 1148 aa17.02■□□□□ 0.32
PBX3-212ENST00000538998 PARP14Q460N5 1801 aa17.02■□□□□ 0.31
PBX3-212ENST00000538998 DUSP11O75319 330 aaKnown RBP17.01■□□□□ 0.31
PBX3-212ENST00000538998 EEF2P13639 858 aaKnown RBP17.01■□□□□ 0.31
PBX3-212ENST00000538998 PBX2P40425 430 aa17.01■□□□□ 0.31
PBX3-212ENST00000538998 CDK8P49336 464 aa17.01■□□□□ 0.31
PBX3-212ENST00000538998 MRPS5P82675 430 aaKnown RBP17.01■□□□□ 0.31
PBX3-212ENST00000538998 MAMDC4Q6UXC1 1216 aa17.01■□□□□ 0.31
PBX3-212ENST00000538998 C16orf59Q7L2K0 433 aa17.01■□□□□ 0.31
PBX3-212ENST00000538998 ITPRIPQ8IWB1 547 aa17.01■□□□□ 0.31
PBX3-212ENST00000538998 PCSK9Q8NBP7 692 aaKnown RBP17.01■□□□□ 0.31
PBX3-212ENST00000538998 REPS2Q8NFH8 660 aa17.01■□□□□ 0.31
PBX3-212ENST00000538998 ADAMTS19Q8TE59 1207 aa17.01■□□□□ 0.31
PBX3-212ENST00000538998 TEX13BQ9BXU2 312 aa17.01■□□□□ 0.31
PBX3-212ENST00000538998 PRDM12Q9H4Q4 367 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms