RNA–Protein interactions for RNA: ENST00000538994.1

CPT1A-204, Transcript of carnitine palmitoyltransferase 1A, humanhuman

TSL 5 BASIC

Gene CPT1A, Length 617 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1A-204ENST00000538994 NUDT12Q9BQG2 462 aa13.11□□□□□ -0.31
CPT1A-204ENST00000538994 SPATC1LQ9H0A9 340 aa13.11□□□□□ -0.31
CPT1A-204ENST00000538994 CRISPLD2Q9H0B8 497 aa13.11□□□□□ -0.31
CPT1A-204ENST00000538994 HOXC10Q9NYD6 342 aa13.11□□□□□ -0.31
CPT1A-204ENST00000538994 CLIP2Q9UDT6 1046 aa13.11□□□□□ -0.31
CPT1A-204ENST00000538994 ANAPC4Q9UJX5 808 aa13.11□□□□□ -0.31
CPT1A-204ENST00000538994 COBLO75128 1261 aa13.1□□□□□ -0.31
CPT1A-204ENST00000538994 SGPL1O95470 568 aa13.1□□□□□ -0.31
CPT1A-204ENST00000538994 XRCC5P13010 732 aaKnown RBP13.1□□□□□ -0.31
CPT1A-204ENST00000538994 TFAP4Q01664 338 aa13.1□□□□□ -0.31
CPT1A-204ENST00000538994 CACNB2Q08289 660 aaPredicted RBP13.1□□□□□ -0.31
CPT1A-204ENST00000538994 GRB14Q14449 540 aa13.1□□□□□ -0.31
CPT1A-204ENST00000538994 ZNF444Q8N0Y2 327 aaPredicted RBP13.1□□□□□ -0.31
CPT1A-204ENST00000538994 LRRC47Q8N1G4 583 aaKnown RBP13.1□□□□□ -0.31
CPT1A-204ENST00000538994 DEFB118Q96PH6 123 aa13.1□□□□□ -0.31
CPT1A-204ENST00000538994 NACAP1Q9BZK3 213 aa13.1□□□□□ -0.31
CPT1A-204ENST00000538994 DNAH12Q6ZR08 3092 aa13.1□□□□□ -0.31
CPT1A-204ENST00000538994 VWA5AO00534 786 aa13.09□□□□□ -0.31
CPT1A-204ENST00000538994 ERCC3P19447 782 aa13.09□□□□□ -0.31
CPT1A-204ENST00000538994 CCND3P30281 292 aaPredicted RBP13.09□□□□□ -0.31
CPT1A-204ENST00000538994 NOVP48745 357 aa13.09□□□□□ -0.31
CPT1A-204ENST00000538994 MAP2K5Q13163 448 aa13.09□□□□□ -0.31
CPT1A-204ENST00000538994 SAMD1Q6SPF0 538 aaPredicted RBP13.09□□□□□ -0.31
CPT1A-204ENST00000538994 SKAP1Q86WV1 359 aa13.09□□□□□ -0.31
CPT1A-204ENST00000538994 TICAM2Q86XR7 235 aa13.09□□□□□ -0.31
CPT1A-204ENST00000538994 TBC1D10CQ8IV04 446 aa13.09□□□□□ -0.31
CPT1A-204ENST00000538994 DIS3LQ8TF46 1054 aaKnown RBP13.09□□□□□ -0.31
CPT1A-204ENST00000538994 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.09□□□□□ -0.31
CPT1A-204ENST00000538994 SH2D4AQ9H788 454 aa13.09□□□□□ -0.31
CPT1A-204ENST00000538994 ZNF214Q9UL59 606 aaPredicted RBP13.09□□□□□ -0.31
CPT1A-204ENST00000538994 PPP1R9AQ9ULJ8 1098 aa13.09□□□□□ -0.31
CPT1A-204ENST00000538994 MYH4Q9Y623 1939 aa13.09□□□□□ -0.31
CPT1A-204ENST00000538994 CCDC171Q6TFL3 1326 aa13.09□□□□□ -0.31
CPT1A-204ENST00000538994 SLC15A5A6NIM6 579 aa13.08□□□□□ -0.32
CPT1A-204ENST00000538994 RAD21O60216 631 aa13.08□□□□□ -0.32
CPT1A-204ENST00000538994 HOXC6P09630 235 aa13.08□□□□□ -0.32
CPT1A-204ENST00000538994 PRKAR2AP13861 404 aaKnown RBP13.08□□□□□ -0.32
CPT1A-204ENST00000538994 RGS2P41220 211 aa13.08□□□□□ -0.32
CPT1A-204ENST00000538994 HAND2P61296 217 aa13.08□□□□□ -0.32
CPT1A-204ENST00000538994 WDR78Q5VTH9 848 aa13.08□□□□□ -0.32
CPT1A-204ENST00000538994 TRPV1Q8NER1 839 aa13.08□□□□□ -0.32
CPT1A-204ENST00000538994 SOCS4Q8WXH5 440 aa13.08□□□□□ -0.32
CPT1A-204ENST00000538994 CHMP4CQ96CF2 233 aa13.08□□□□□ -0.32
CPT1A-204ENST00000538994 APBA2Q99767 749 aa13.08□□□□□ -0.32
CPT1A-204ENST00000538994 GOPCQ9HD26 462 aa13.08□□□□□ -0.32
CPT1A-204ENST00000538994 RIPK3Q9Y572 518 aa13.08□□□□□ -0.32
CPT1A-204ENST00000538994 CEP290O15078 2479 aa13.08□□□□□ -0.32
CPT1A-204ENST00000538994 RPTORQ8N122 1335 aa13.08□□□□□ -0.32
CPT1A-204ENST00000538994 ZNF236Q9UL36 1845 aa13.07□□□□□ -0.32
CPT1A-204ENST00000538994 ORC4O43929 436 aa13.07□□□□□ -0.32
CPT1A-204ENST00000538994 TTLL1O95922 423 aa13.07□□□□□ -0.32
CPT1A-204ENST00000538994 TSPY3P0CV98 308 aa13.07□□□□□ -0.32
CPT1A-204ENST00000538994 TSPY8P0CW00 308 aa13.07□□□□□ -0.32
CPT1A-204ENST00000538994 ADORA2AP29274 412 aa13.07□□□□□ -0.32
CPT1A-204ENST00000538994 CCNA1P78396 465 aa13.07□□□□□ -0.32
CPT1A-204ENST00000538994 PDE4BQ07343 736 aa13.07□□□□□ -0.32
CPT1A-204ENST00000538994 TTC22Q5TAA0 569 aa13.07□□□□□ -0.32
CPT1A-204ENST00000538994 LHX8Q68G74 356 aa13.07□□□□□ -0.32
CPT1A-204ENST00000538994 CWC27Q6UX04 472 aaKnown RBP13.07□□□□□ -0.32
CPT1A-204ENST00000538994 MB21D1Q8N884 522 aa13.07□□□□□ -0.32
CPT1A-204ENST00000538994 SHCBP1Q8NEM2 672 aa13.07□□□□□ -0.32
CPT1A-204ENST00000538994 ZMYM6O95789 1325 aa13.07□□□□□ -0.32
CPT1A-204ENST00000538994 CYP2C19P33261 490 aa13.06□□□□□ -0.32
CPT1A-204ENST00000538994 PLS1Q14651 629 aa13.06□□□□□ -0.32
CPT1A-204ENST00000538994 PRPF38BQ5VTL8 546 aaKnown RBP13.06□□□□□ -0.32
CPT1A-204ENST00000538994 RCSD1Q6JBY9 416 aa13.06□□□□□ -0.32
CPT1A-204ENST00000538994 RIOX2Q8IUF8 465 aa13.06□□□□□ -0.32
CPT1A-204ENST00000538994 GMCL1P1Q8NEA9 526 aa13.06□□□□□ -0.32
CPT1A-204ENST00000538994 SLF1Q9BQI6 1058 aa13.06□□□□□ -0.32
CPT1A-204ENST00000538994 NEDD4P46934 1319 aa13.06□□□□□ -0.32
CPT1A-204ENST00000538994 RANBP6O60518 1105 aaKnown RBP13.05□□□□□ -0.32
CPT1A-204ENST00000538994 ZKSCAN1P17029 563 aaPredicted RBP13.05□□□□□ -0.32
CPT1A-204ENST00000538994 SLFN13Q68D06 897 aa13.05□□□□□ -0.32
CPT1A-204ENST00000538994 NCAPG2Q86XI2 1143 aa13.05□□□□□ -0.32
CPT1A-204ENST00000538994 CCAR1Q8IX12 1150 aaKnown RBP13.05□□□□□ -0.32
CPT1A-204ENST00000538994 ZNF287Q9HBT7 754 aa13.05□□□□□ -0.32
CPT1A-204ENST00000538994 HMX1Q9NP08 348 aaPredicted RBP13.05□□□□□ -0.32
CPT1A-204ENST00000538994 PCDH10Q9P2E7 1040 aa13.05□□□□□ -0.32
CPT1A-204ENST00000538994 OGDHLQ9ULD0 1010 aa13.05□□□□□ -0.32
CPT1A-204ENST00000538994 ALPK3Q96L96 1907 aa13.05□□□□□ -0.32
CPT1A-204ENST00000538994 FARP2O94887 1054 aaPredicted RBP13.04□□□□□ -0.32
CPT1A-204ENST00000538994 TFRCP02786 760 aaKnown RBP13.04□□□□□ -0.32
CPT1A-204ENST00000538994 PGK2P07205 417 aa13.04□□□□□ -0.32
CPT1A-204ENST00000538994 TAL1P17542 331 aaPredicted RBP13.04□□□□□ -0.32
CPT1A-204ENST00000538994 MCCP23508 829 aa13.04□□□□□ -0.32
CPT1A-204ENST00000538994 STAT3P40763 770 aa13.04□□□□□ -0.32
CPT1A-204ENST00000538994 PRAMEF19Q5SWL8 479 aa13.04□□□□□ -0.32
CPT1A-204ENST00000538994 PAWRQ96IZ0 340 aaKnown RBP13.04□□□□□ -0.32
CPT1A-204ENST00000538994 MROH8Q9H579 483 aa13.04□□□□□ -0.32
CPT1A-204ENST00000538994 SLC38A10Q9HBR0 1119 aa13.04□□□□□ -0.32
CPT1A-204ENST00000538994 SYNPO2Q9UMS6 1093 aa13.04□□□□□ -0.32
CPT1A-204ENST00000538994 ZNF536O15090 1300 aa13.04□□□□□ -0.32
CPT1A-204ENST00000538994 ZNFX1Q9P2E3 1918 aaKnown RBP13.03□□□□□ -0.32
CPT1A-204ENST00000538994 LAMA3Q16787 3333 aa13.03□□□□□ -0.32
CPT1A-204ENST00000538994 SZT2Q5T011 3432 aa13.03□□□□□ -0.32
CPT1A-204ENST00000538994 TSPY2A6NKD2 308 aa13.03□□□□□ -0.32
CPT1A-204ENST00000538994 H0YGN5 161 aa13.03□□□□□ -0.32
CPT1A-204ENST00000538994 ATP2A1O14983 1001 aa13.03□□□□□ -0.32
CPT1A-204ENST00000538994 STRNO43815 780 aa13.03□□□□□ -0.32
CPT1A-204ENST00000538994 SLC3A2P08195 630 aaKnown RBP13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms