RNA–Protein interactions for RNA: ENST00000538910.1

LPCAT3-207, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 5

Gene LPCAT3, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-207ENST00000538910 C12orf60Q5U649 245 aa24.08■■□□□ 1.45
LPCAT3-207ENST00000538910 RIOX2Q8IUF8 465 aa24.08■■□□□ 1.45
LPCAT3-207ENST00000538910 PANK1Q8TE04 598 aa24.08■■□□□ 1.45
LPCAT3-207ENST00000538910 DIS3Q9Y2L1 958 aaKnown RBP24.08■■□□□ 1.45
LPCAT3-207ENST00000538910 TACC3Q9Y6A5 838 aa24.08■■□□□ 1.45
LPCAT3-207ENST00000538910 LTBP2Q14767 1821 aa24.07■■□□□ 1.44
LPCAT3-207ENST00000538910 A0A0G2JMZ2 1700 aa24.07■■□□□ 1.44
LPCAT3-207ENST00000538910 SMIM22K7EJ46 135 aa24.07■■□□□ 1.44
LPCAT3-207ENST00000538910 RARBP10826 455 aa24.07■■□□□ 1.44
LPCAT3-207ENST00000538910 ADD2P35612 726 aa24.07■■□□□ 1.44
LPCAT3-207ENST00000538910 MMP19Q99542 508 aa24.07■■□□□ 1.44
LPCAT3-207ENST00000538910 XPNPEP3Q9NQH7 507 aa24.07■■□□□ 1.44
LPCAT3-207ENST00000538910 NAV1Q8NEY1 1877 aa24.07■■□□□ 1.44
LPCAT3-207ENST00000538910 CDH23Q9H251 3354 aa24.06■■□□□ 1.44
LPCAT3-207ENST00000538910 MBD4O95243 580 aa24.06■■□□□ 1.44
LPCAT3-207ENST00000538910 ITGB8P26012 769 aa24.06■■□□□ 1.44
LPCAT3-207ENST00000538910 ZNF792Q3KQV3 632 aa24.06■■□□□ 1.44
LPCAT3-207ENST00000538910 SLFNL1Q499Z3 407 aa24.06■■□□□ 1.44
LPCAT3-207ENST00000538910 SAMD1Q6SPF0 538 aaPredicted RBP24.06■■□□□ 1.44
LPCAT3-207ENST00000538910 TINF2Q9BSI4 451 aa24.06■■□□□ 1.44
LPCAT3-207ENST00000538910 PAG1Q9NWQ8 432 aa24.06■■□□□ 1.44
LPCAT3-207ENST00000538910 CYP2D7A0A087X1C5 515 aa24.05■■□□□ 1.44
LPCAT3-207ENST00000538910 USP17L12C9JPN9 530 aa24.05■■□□□ 1.44
LPCAT3-207ENST00000538910 USP17L21D6R901 530 aa24.05■■□□□ 1.44
LPCAT3-207ENST00000538910 PGK2P07205 417 aa24.05■■□□□ 1.44
LPCAT3-207ENST00000538910 EEF2P13639 858 aaKnown RBP24.05■■□□□ 1.44
LPCAT3-207ENST00000538910 C16orf86Q6ZW13 317 aa24.05■■□□□ 1.44
LPCAT3-207ENST00000538910 RNF180Q86T96 592 aa24.05■■□□□ 1.44
LPCAT3-207ENST00000538910 RPAP2Q8IXW5 612 aaPredicted RBP24.05■■□□□ 1.44
LPCAT3-207ENST00000538910 TTYH1Q9H313 450 aaPredicted RBP24.05■■□□□ 1.44
LPCAT3-207ENST00000538910 KANSL2Q9H9L4 492 aa24.05■■□□□ 1.44
LPCAT3-207ENST00000538910 FBXO28Q9NVF7 368 aa24.05■■□□□ 1.44
LPCAT3-207ENST00000538910 PRUNE2Q8WUY3 3088 aa24.05■■□□□ 1.44
LPCAT3-207ENST00000538910 APBB1O00213 710 aa24.04■■□□□ 1.44
LPCAT3-207ENST00000538910 VWA5AO00534 786 aa24.04■■□□□ 1.44
LPCAT3-207ENST00000538910 STAT3P40763 770 aa24.04■■□□□ 1.44
LPCAT3-207ENST00000538910 KCTD2Q14681 263 aa24.04■■□□□ 1.44
LPCAT3-207ENST00000538910 MAFAQ8NHW3 353 aaPredicted RBP24.04■■□□□ 1.44
LPCAT3-207ENST00000538910 BOLA2Q9H3K6 86 aa24.04■■□□□ 1.44
LPCAT3-207ENST00000538910 PPP1R9AQ9ULJ8 1098 aa24.04■■□□□ 1.44
LPCAT3-207ENST00000538910 KIAA0355O15063 1070 aa24.03■■□□□ 1.44
LPCAT3-207ENST00000538910 PGK1P00558 417 aa24.03■■□□□ 1.44
LPCAT3-207ENST00000538910 CLTBP09497 229 aa24.03■■□□□ 1.44
LPCAT3-207ENST00000538910 ZNF865P0CJ78 1059 aaPredicted RBP24.03■■□□□ 1.44
LPCAT3-207ENST00000538910 TAL1P17542 331 aaPredicted RBP24.03■■□□□ 1.44
LPCAT3-207ENST00000538910 ATP5JP18859 108 aa24.03■■□□□ 1.44
LPCAT3-207ENST00000538910 HNRNPUQ00839 825 aaKnown RBP eCLIP24.03■■□□□ 1.44
LPCAT3-207ENST00000538910 AMOTL1Q8IY63 956 aa24.03■■□□□ 1.44
LPCAT3-207ENST00000538910 ZNF214Q9UL59 606 aaPredicted RBP24.03■■□□□ 1.44
LPCAT3-207ENST00000538910 SMCHD1A6NHR9 2005 aa24.02■■□□□ 1.44
LPCAT3-207ENST00000538910 RAB11FIP3O75154 756 aa24.02■■□□□ 1.44
LPCAT3-207ENST00000538910 HMMRO75330 724 aa24.02■■□□□ 1.44
LPCAT3-207ENST00000538910 COPB2P35606 906 aa24.02■■□□□ 1.44
LPCAT3-207ENST00000538910 UBE3CQ15386 1083 aa24.02■■□□□ 1.44
LPCAT3-207ENST00000538910 SIRT2Q8IXJ6 389 aa24.02■■□□□ 1.44
LPCAT3-207ENST00000538910 REPS2Q8NFH8 660 aa24.02■■□□□ 1.44
LPCAT3-207ENST00000538910 MYLIPQ8WY64 445 aa24.02■■□□□ 1.44
LPCAT3-207ENST00000538910 DDX24Q9GZR7 859 aaKnown RBP eCLIP24.02■■□□□ 1.44
LPCAT3-207ENST00000538910 GOPCQ9HD26 462 aa24.02■■□□□ 1.44
LPCAT3-207ENST00000538910 AKR1A1P14550 325 aa24.01■■□□□ 1.43
LPCAT3-207ENST00000538910 EPHB4P54760 987 aa24.01■■□□□ 1.43
LPCAT3-207ENST00000538910 HAUS7Q99871 368 aa24.01■■□□□ 1.43
LPCAT3-207ENST00000538910 ROBO3Q96MS0 1386 aa24.01■■□□□ 1.43
LPCAT3-207ENST00000538910 TMEM265A0A087WTH1 108 aa24■■□□□ 1.43
LPCAT3-207ENST00000538910 A0A1W2PQ45 241 aaPredicted RBP24■■□□□ 1.43
LPCAT3-207ENST00000538910 A0A1W2PQY0 241 aa24■■□□□ 1.43
LPCAT3-207ENST00000538910 CHGBP05060 677 aa24■■□□□ 1.43
LPCAT3-207ENST00000538910 RAG1P15918 1043 aa24■■□□□ 1.43
LPCAT3-207ENST00000538910 CTR9Q6PD62 1173 aa24■■□□□ 1.43
LPCAT3-207ENST00000538910 DDRGK1Q96HY6 314 aa24■■□□□ 1.43
LPCAT3-207ENST00000538910 RNPC3Q96LT9 517 aaKnown RBP24■■□□□ 1.43
LPCAT3-207ENST00000538910 TSEN34Q9BSV6 310 aaKnown RBP24■■□□□ 1.43
LPCAT3-207ENST00000538910 GNL3Q9BVP2 549 aaKnown RBP eCLIP24■■□□□ 1.43
LPCAT3-207ENST00000538910 ZBED9Q6R2W3 1325 aa24■■□□□ 1.43
LPCAT3-207ENST00000538910 SPTBN5Q9NRC6 3674 aaKnown RBP23.99■■□□□ 1.43
LPCAT3-207ENST00000538910 PQBP1O60828 265 aaKnown RBP23.99■■□□□ 1.43
LPCAT3-207ENST00000538910 ADAMTS4O75173 837 aa23.99■■□□□ 1.43
LPCAT3-207ENST00000538910 MS4A1P11836 297 aa23.99■■□□□ 1.43
LPCAT3-207ENST00000538910 FAM83BQ5T0W9 1011 aa23.99■■□□□ 1.43
LPCAT3-207ENST00000538910 ANKRD33Q7Z3H0 272 aa23.99■■□□□ 1.43
LPCAT3-207ENST00000538910 MSL3Q8N5Y2 521 aaKnown RBP23.99■■□□□ 1.43
LPCAT3-207ENST00000538910 TOX2Q96NM4 488 aa23.99■■□□□ 1.43
LPCAT3-207ENST00000538910 BCL11AQ9H165 835 aa23.99■■□□□ 1.43
LPCAT3-207ENST00000538910 ZBTB40Q9NUA8 1239 aa23.99■■□□□ 1.43
LPCAT3-207ENST00000538910 TMEM39AQ9NV64 488 aa23.99■■□□□ 1.43
LPCAT3-207ENST00000538910 CNPY2Q9Y2B0 182 aa23.99■■□□□ 1.43
LPCAT3-207ENST00000538910 SLC4A4Q9Y6R1 1079 aa23.99■■□□□ 1.43
LPCAT3-207ENST00000538910 ZNFX1Q9P2E3 1918 aaKnown RBP23.98■■□□□ 1.43
LPCAT3-207ENST00000538910 FAAP100Q0VG06 881 aa23.97■■□□□ 1.43
LPCAT3-207ENST00000538910 KLHDC9Q8NEP7 349 aa23.97■■□□□ 1.43
LPCAT3-207ENST00000538910 LENG1Q96BZ8 264 aaPredicted RBP23.97■■□□□ 1.43
LPCAT3-207ENST00000538910 RAD21O60216 631 aa23.96■■□□□ 1.43
LPCAT3-207ENST00000538910 SNAI1O95863 264 aaPredicted RBP23.96■■□□□ 1.43
LPCAT3-207ENST00000538910 FOSL2P15408 326 aa23.96■■□□□ 1.43
LPCAT3-207ENST00000538910 ACLYP53396 1101 aa23.96■■□□□ 1.43
LPCAT3-207ENST00000538910 FPGSQ05932 587 aa23.96■■□□□ 1.43
LPCAT3-207ENST00000538910 CCSAPQ6IQ19 270 aaPredicted RBP23.96■■□□□ 1.43
LPCAT3-207ENST00000538910 MAMDC4Q6UXC1 1216 aa23.96■■□□□ 1.43
LPCAT3-207ENST00000538910 NUP133Q8WUM0 1156 aa23.96■■□□□ 1.43
LPCAT3-207ENST00000538910 TEX13BQ9BXU2 312 aa23.96■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms