RNA–Protein interactions for RNA: ENST00000538827.5

CD4-208, Transcript of CD4 molecule, humanhuman

TSL 1 (best)

Gene CD4, Length 985 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-208ENST00000538827 LLPHQ9BRT6 129 aaKnown RBP16.45■□□□□ 0.22
CD4-208ENST00000538827 SLC26A6Q9BXS9 759 aa16.45■□□□□ 0.22
CD4-208ENST00000538827 SH2D4AQ9H788 454 aa16.45■□□□□ 0.22
CD4-208ENST00000538827 ZNF112Q9UJU3 913 aa16.45■□□□□ 0.22
CD4-208ENST00000538827 CSADQ9Y600 493 aa16.45■□□□□ 0.22
CD4-208ENST00000538827 USP17L5A8MUK1 530 aa16.44■□□□□ 0.22
CD4-208ENST00000538827 USP2O75604 605 aaPredicted RBP16.44■□□□□ 0.22
CD4-208ENST00000538827 PARP1P09874 1014 aaKnown RBP16.44■□□□□ 0.22
CD4-208ENST00000538827 GOLGA8HP0CJ92 632 aa16.44■□□□□ 0.22
CD4-208ENST00000538827 TMTC3Q6ZXV5 915 aa16.44■□□□□ 0.22
CD4-208ENST00000538827 CMTR1Q8N1G2 835 aaKnown RBP16.44■□□□□ 0.22
CD4-208ENST00000538827 CCDC82Q8N4S0 544 aa16.44■□□□□ 0.22
CD4-208ENST00000538827 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.44■□□□□ 0.22
CD4-208ENST00000538827 ACER1Q8TDN7 264 aa16.44■□□□□ 0.22
CD4-208ENST00000538827 GINM1Q9NU53 330 aa16.44■□□□□ 0.22
CD4-208ENST00000538827 PDHBP11177 359 aa16.43■□□□□ 0.22
CD4-208ENST00000538827 HMGN5P82970 282 aaKnown RBP16.43■□□□□ 0.22
CD4-208ENST00000538827 NOL9Q5SY16 702 aaKnown RBP16.43■□□□□ 0.22
CD4-208ENST00000538827 SLFN13Q68D06 897 aa16.43■□□□□ 0.22
CD4-208ENST00000538827 USP17L2Q6R6M4 530 aa16.43■□□□□ 0.22
CD4-208ENST00000538827 MOB2Q70IA6 237 aa16.43■□□□□ 0.22
CD4-208ENST00000538827 ARMC9Q7Z3E5 817 aa16.43■□□□□ 0.22
CD4-208ENST00000538827 PHKBQ93100 1093 aa16.43■□□□□ 0.22
CD4-208ENST00000538827 AS3MTQ9HBK9 375 aa16.43■□□□□ 0.22
CD4-208ENST00000538827 CWC22Q9HCG8 908 aaKnown RBP16.43■□□□□ 0.22
CD4-208ENST00000538827 GOPCQ9HD26 462 aa16.43■□□□□ 0.22
CD4-208ENST00000538827 GPCPD1Q9NPB8 672 aa16.43■□□□□ 0.22
CD4-208ENST00000538827 FAM217BQ9NTX9 383 aaPredicted RBP16.43■□□□□ 0.22
CD4-208ENST00000538827 KIF3AQ9Y496 699 aa16.43■□□□□ 0.22
CD4-208ENST00000538827 CNTNAP5Q8WYK1 1306 aa16.43■□□□□ 0.22
CD4-208ENST00000538827 A0A1W2PRG0 241 aa16.42■□□□□ 0.22
CD4-208ENST00000538827 NDUFB10O96000 172 aa16.42■□□□□ 0.22
CD4-208ENST00000538827 GNAQP50148 359 aa16.42■□□□□ 0.22
CD4-208ENST00000538827 MAP3K9P80192 1104 aa16.42■□□□□ 0.22
CD4-208ENST00000538827 AKAP17AQ02040 695 aaKnown RBP16.42■□□□□ 0.22
CD4-208ENST00000538827 SSRP1Q08945 709 aaKnown RBP16.42■□□□□ 0.22
CD4-208ENST00000538827 VGLL4Q14135 290 aa16.42■□□□□ 0.22
CD4-208ENST00000538827 PPP2R5BQ15173 497 aa16.42■□□□□ 0.22
CD4-208ENST00000538827 ASPRV1Q53RT3 343 aa16.42■□□□□ 0.22
CD4-208ENST00000538827 SIAH1Q8IUQ4 282 aa16.42■□□□□ 0.22
CD4-208ENST00000538827 TRIM22Q8IYM9 498 aa16.42■□□□□ 0.22
CD4-208ENST00000538827 STAG2Q8N3U4 1231 aa16.42■□□□□ 0.22
CD4-208ENST00000538827 SMARCC2Q8TAQ2 1214 aa16.42■□□□□ 0.22
CD4-208ENST00000538827 DCAF4Q8WV16 495 aa16.42■□□□□ 0.22
CD4-208ENST00000538827 PIBF1Q8WXW3 757 aa16.42■□□□□ 0.22
CD4-208ENST00000538827 ORC3Q9UBD5 711 aaPredicted RBP16.42■□□□□ 0.22
CD4-208ENST00000538827 MAD2L2Q9UI95 211 aa16.42■□□□□ 0.22
CD4-208ENST00000538827 SNCAIPQ9Y6H5 919 aa16.42■□□□□ 0.22
CD4-208ENST00000538827 IFNAR1P17181 557 aa16.41■□□□□ 0.22
CD4-208ENST00000538827 SLC1A4P43007 532 aa16.41■□□□□ 0.22
CD4-208ENST00000538827 CTU1Q7Z7A3 348 aaKnown RBP16.41■□□□□ 0.22
CD4-208ENST00000538827 SPICE1Q8N0Z3 855 aa16.41■□□□□ 0.22
CD4-208ENST00000538827 GMCL1P1Q8NEA9 526 aa16.41■□□□□ 0.22
CD4-208ENST00000538827 MKL1Q969V6 931 aa16.41■□□□□ 0.22
CD4-208ENST00000538827 MAP3K14Q99558 947 aa16.41■□□□□ 0.22
CD4-208ENST00000538827 NUP88Q99567 741 aaPredicted RBP16.41■□□□□ 0.22
CD4-208ENST00000538827 ELP3Q9H9T3 547 aa16.41■□□□□ 0.22
CD4-208ENST00000538827 TMX2Q9Y320 296 aa16.41■□□□□ 0.22
CD4-208ENST00000538827 STK36Q9NRP7 1315 aa16.41■□□□□ 0.22
CD4-208ENST00000538827 PTPRFP10586 1907 aa16.41■□□□□ 0.22
CD4-208ENST00000538827 BAZ2BQ9UIF8 2168 aaKnown RBP16.4■□□□□ 0.22
CD4-208ENST00000538827 VPS37CA5D8V6 355 aaPredicted RBP16.4■□□□□ 0.22
CD4-208ENST00000538827 KLRF2D3W0D1 207 aa16.4■□□□□ 0.22
CD4-208ENST00000538827 F5H6K3 240 aa16.4■□□□□ 0.22
CD4-208ENST00000538827 FMNL1O95466 1100 aaPredicted RBP16.4■□□□□ 0.22
CD4-208ENST00000538827 PTPRAP18433 802 aa16.4■□□□□ 0.22
CD4-208ENST00000538827 KLRC3Q07444 240 aa16.4■□□□□ 0.22
CD4-208ENST00000538827 IKQ13123 557 aaPredicted RBP16.4■□□□□ 0.22
CD4-208ENST00000538827 MTMR2Q13614 643 aa16.4■□□□□ 0.22
CD4-208ENST00000538827 NTRK3Q16288 839 aa16.4■□□□□ 0.22
CD4-208ENST00000538827 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.4■□□□□ 0.22
CD4-208ENST00000538827 KCTD1Q719H9 257 aa16.4■□□□□ 0.22
CD4-208ENST00000538827 ANKRD13AQ8IZ07 590 aa16.4■□□□□ 0.22
CD4-208ENST00000538827 SRBD1Q8N5C6 995 aaKnown RBP16.4■□□□□ 0.22
CD4-208ENST00000538827 CPVLQ9H3G5 476 aa16.4■□□□□ 0.22
CD4-208ENST00000538827 VCPKMTQ9H867 229 aa16.4■□□□□ 0.22
CD4-208ENST00000538827 CHMP5Q9NZZ3 219 aa16.4■□□□□ 0.22
CD4-208ENST00000538827 hCG_1642624A0A1W2PR95 340 aa16.39■□□□□ 0.21
CD4-208ENST00000538827 PALM3A6NDB9 673 aaPredicted RBP16.39■□□□□ 0.21
CD4-208ENST00000538827 TRIM75PA6NK02 468 aa16.39■□□□□ 0.21
CD4-208ENST00000538827 UBE2Q2LH0YL09 131 aa16.39■□□□□ 0.21
CD4-208ENST00000538827 ZNF543Q08ER8 600 aa16.39■□□□□ 0.21
CD4-208ENST00000538827 HABP4Q5JVS0 413 aaKnown RBP16.39■□□□□ 0.21
CD4-208ENST00000538827 GPATCH4Q5T3I0 446 aaKnown RBP16.39■□□□□ 0.21
CD4-208ENST00000538827 FOXD4L5Q5VV16 416 aaPredicted RBP16.39■□□□□ 0.21
CD4-208ENST00000538827 FOXD4L4Q8WXT5 416 aaPredicted RBP16.39■□□□□ 0.21
CD4-208ENST00000538827 CLMNQ96JQ2 1002 aa16.39■□□□□ 0.21
CD4-208ENST00000538827 GBA2Q9HCG7 927 aaPredicted RBP16.39■□□□□ 0.21
CD4-208ENST00000538827 CIZ1Q9ULV3 898 aaPredicted RBP16.39■□□□□ 0.21
CD4-208ENST00000538827 SYNPO2Q9UMS6 1093 aa16.39■□□□□ 0.21
CD4-208ENST00000538827 ZHX2Q9Y6X8 837 aa16.39■□□□□ 0.21
CD4-208ENST00000538827 SNHG28P0DPA3 235 aa16.38■□□□□ 0.21
CD4-208ENST00000538827 BMP3P12645 472 aa16.38■□□□□ 0.21
CD4-208ENST00000538827 HUNKP57058 714 aa16.38■□□□□ 0.21
CD4-208ENST00000538827 SPP2Q13103 211 aa16.38■□□□□ 0.21
CD4-208ENST00000538827 PKN2Q16513 984 aaKnown RBP16.38■□□□□ 0.21
CD4-208ENST00000538827 FAM83BQ5T0W9 1011 aa16.38■□□□□ 0.21
CD4-208ENST00000538827 LARP1BQ659C4 914 aaKnown RBP16.38■□□□□ 0.21
CD4-208ENST00000538827 TTBK2Q6IQ55 1244 aa16.38■□□□□ 0.21
CD4-208ENST00000538827 SAMD1Q6SPF0 538 aaPredicted RBP16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms