RNA–Protein interactions for RNA: ENST00000538744.5

DDX55-205, Transcript of DEAD-box helicase 55, humanhuman

TSL 5 BASIC

Gene DDX55, Length 1,735 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-205ENST00000538744 DAGLBQ8NCG7 672 aa23.36■■□□□ 1.33
DDX55-205ENST00000538744 PI4KBQ9UBF8 816 aa23.36■■□□□ 1.33
DDX55-205ENST00000538744 KCNH3Q9ULD8 1083 aa23.36■■□□□ 1.33
DDX55-205ENST00000538744 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP23.36■■□□□ 1.33
DDX55-205ENST00000538744 USP17L5A8MUK1 530 aa23.36■■□□□ 1.33
DDX55-205ENST00000538744 STXBP3O00186 592 aa23.36■■□□□ 1.33
DDX55-205ENST00000538744 PDHBP11177 359 aa23.36■■□□□ 1.33
DDX55-205ENST00000538744 ZRSR1Q15695 479 aaKnown RBP23.36■■□□□ 1.33
DDX55-205ENST00000538744 RSBN1LQ6PCB5 846 aaPredicted RBP23.36■■□□□ 1.33
DDX55-205ENST00000538744 PIK3AP1Q6ZUJ8 805 aa23.36■■□□□ 1.33
DDX55-205ENST00000538744 RRP36Q96EU6 259 aaKnown RBP23.36■■□□□ 1.33
DDX55-205ENST00000538744 NOM1Q5C9Z4 860 aaKnown RBP23.35■■□□□ 1.33
DDX55-205ENST00000538744 ZSCAN29Q8IWY8 852 aaPredicted RBP23.35■■□□□ 1.33
DDX55-205ENST00000538744 LRRC47Q8N1G4 583 aaKnown RBP23.35■■□□□ 1.33
DDX55-205ENST00000538744 CCDC12Q8WUD4 166 aaPredicted RBP23.35■■□□□ 1.33
DDX55-205ENST00000538744 CLIP2Q9UDT6 1046 aa23.35■■□□□ 1.33
DDX55-205ENST00000538744 CCDC39Q9UFE4 941 aa23.35■■□□□ 1.33
DDX55-205ENST00000538744 COL2A1P02458 1487 aaPredicted RBP23.35■■□□□ 1.33
DDX55-205ENST00000538744 DDTLA6NHG4 134 aaPredicted RBP23.34■■□□□ 1.33
DDX55-205ENST00000538744 ESPNB1AK53 854 aa23.34■■□□□ 1.33
DDX55-205ENST00000538744 MPHOSPH10O00566 681 aaKnown RBP23.34■■□□□ 1.33
DDX55-205ENST00000538744 ENTPD3O75355 529 aa23.34■■□□□ 1.33
DDX55-205ENST00000538744 SNHG28P0DPA3 235 aa23.34■■□□□ 1.33
DDX55-205ENST00000538744 C11orf57Q6ZUT1 292 aaPredicted RBP23.34■■□□□ 1.33
DDX55-205ENST00000538744 FERMT2Q96AC1 680 aa23.34■■□□□ 1.33
DDX55-205ENST00000538744 TRIM34Q9BYJ4 488 aa23.34■■□□□ 1.33
DDX55-205ENST00000538744 TDRD3Q9H7E2 651 aaKnown RBP23.34■■□□□ 1.33
DDX55-205ENST00000538744 DNAJC18Q9H819 358 aa23.34■■□□□ 1.33
DDX55-205ENST00000538744 ZNF277Q9NRM2 450 aaPredicted RBP23.34■■□□□ 1.33
DDX55-205ENST00000538744 SEC63Q9UGP8 760 aaKnown RBP23.34■■□□□ 1.33
DDX55-205ENST00000538744 EIF6P56537 245 aaKnown RBP23.33■■□□□ 1.33
DDX55-205ENST00000538744 TGFB2P61812 414 aa23.33■■□□□ 1.33
DDX55-205ENST00000538744 PLCB2Q00722 1185 aa23.33■■□□□ 1.33
DDX55-205ENST00000538744 GRIN1Q05586 938 aa23.33■■□□□ 1.33
DDX55-205ENST00000538744 TYW1BQ6NUM6 668 aa23.33■■□□□ 1.33
DDX55-205ENST00000538744 ERCC4Q92889 916 aaPredicted RBP23.33■■□□□ 1.33
DDX55-205ENST00000538744 COL4A5P29400 1685 aa23.33■■□□□ 1.33
DDX55-205ENST00000538744 ATRNL1Q5VV63 1379 aa23.33■■□□□ 1.33
DDX55-205ENST00000538744 ZNF174Q15697 407 aa23.33■■□□□ 1.32
DDX55-205ENST00000538744 KRBA2Q6ZNG9 492 aa23.33■■□□□ 1.32
DDX55-205ENST00000538744 SH3BP5LQ7L8J4 393 aa23.33■■□□□ 1.32
DDX55-205ENST00000538744 CLEC10AQ8IUN9 316 aa23.33■■□□□ 1.32
DDX55-205ENST00000538744 FOXP4Q8IVH2 680 aaPredicted RBP23.33■■□□□ 1.32
DDX55-205ENST00000538744 CEP57L1Q8IYX8 460 aa23.33■■□□□ 1.32
DDX55-205ENST00000538744 NAT10Q9H0A0 1025 aaKnown RBP23.33■■□□□ 1.32
DDX55-205ENST00000538744 CPVLQ9H3G5 476 aa23.33■■□□□ 1.32
DDX55-205ENST00000538744 RIOX1Q9H6W3 641 aa23.33■■□□□ 1.32
DDX55-205ENST00000538744 PIM2Q9P1W9 311 aa23.33■■□□□ 1.32
DDX55-205ENST00000538744 ADAMTS3O15072 1205 aa23.32■■□□□ 1.32
DDX55-205ENST00000538744 ZBTB7AO95365 584 aa23.32■■□□□ 1.32
DDX55-205ENST00000538744 VIL1P09327 827 aaKnown RBP23.32■■□□□ 1.32
DDX55-205ENST00000538744 SPECC1Q5M775 1068 aa23.32■■□□□ 1.32
DDX55-205ENST00000538744 ELOA2Q8IYF1 753 aaPredicted RBP23.32■■□□□ 1.32
DDX55-205ENST00000538744 CSRNP2Q9H175 543 aa23.32■■□□□ 1.32
DDX55-205ENST00000538744 HDAC9Q9UKV0 1011 aa23.32■■□□□ 1.32
DDX55-205ENST00000538744 CCDC194A0A1B0GVG4 234 aa23.31■■□□□ 1.32
DDX55-205ENST00000538744 M0R2N6 131 aa23.31■■□□□ 1.32
DDX55-205ENST00000538744 PSMD14O00487 310 aa23.31■■□□□ 1.32
DDX55-205ENST00000538744 WNT7AO00755 349 aa23.31■■□□□ 1.32
DDX55-205ENST00000538744 RAD17O75943 681 aa23.31■■□□□ 1.32
DDX55-205ENST00000538744 PTMAP06454 111 aaKnown RBP23.31■■□□□ 1.32
DDX55-205ENST00000538744 POLD1P28340 1107 aa23.31■■□□□ 1.32
DDX55-205ENST00000538744 NAPAP54920 295 aa23.31■■□□□ 1.32
DDX55-205ENST00000538744 ATP2C1P98194 919 aaPredicted RBP23.31■■□□□ 1.32
DDX55-205ENST00000538744 IQCB1Q15051 598 aa23.31■■□□□ 1.32
DDX55-205ENST00000538744 HOMER1Q86YM7 354 aa23.31■■□□□ 1.32
DDX55-205ENST00000538744 CNNM3Q8NE01 707 aa23.31■■□□□ 1.32
DDX55-205ENST00000538744 PRMT6Q96LA8 375 aaPredicted RBP23.31■■□□□ 1.32
DDX55-205ENST00000538744 FRMPD2Q68DX3 1309 aaPredicted RBP23.31■■□□□ 1.32
DDX55-205ENST00000538744 BRCA1P38398 1863 aaKnown RBP23.31■■□□□ 1.32
DDX55-205ENST00000538744 hCG_1984214I3L0E3 225 aa23.3■■□□□ 1.32
DDX55-205ENST00000538744 AP5Z1O43299 807 aa23.3■■□□□ 1.32
DDX55-205ENST00000538744 LONRF3Q496Y0 759 aa23.3■■□□□ 1.32
DDX55-205ENST00000538744 CERKLQ49MI3 558 aaPredicted RBP23.3■■□□□ 1.32
DDX55-205ENST00000538744 ZNF713Q8N859 430 aaPredicted RBP23.3■■□□□ 1.32
DDX55-205ENST00000538744 GMLQ99445 158 aa23.3■■□□□ 1.32
DDX55-205ENST00000538744 ZMYND12Q9H0C1 365 aa23.3■■□□□ 1.32
DDX55-205ENST00000538744 RTN4Q9NQC3 1192 aaKnown RBP23.3■■□□□ 1.32
DDX55-205ENST00000538744 RRAGDQ9NQL2 400 aaPredicted RBP23.3■■□□□ 1.32
DDX55-205ENST00000538744 TMOD2Q9NZR1 351 aa23.3■■□□□ 1.32
DDX55-205ENST00000538744 HOOK1Q9UJC3 728 aaKnown RBP23.3■■□□□ 1.32
DDX55-205ENST00000538744 GOLGA6L19H0YKK7 550 aa23.3■■□□□ 1.32
DDX55-205ENST00000538744 NLRP12P59046 1061 aa23.3■■□□□ 1.32
DDX55-205ENST00000538744 ZNF543Q08ER8 600 aa23.3■■□□□ 1.32
DDX55-205ENST00000538744 TATDN1Q6P1N9 297 aa23.3■■□□□ 1.32
DDX55-205ENST00000538744 ZSCAN30Q86W11 494 aa23.3■■□□□ 1.32
DDX55-205ENST00000538744 METTL16Q86W50 562 aaKnown RBP23.3■■□□□ 1.32
DDX55-205ENST00000538744 NIM1KQ8IY84 436 aa23.3■■□□□ 1.32
DDX55-205ENST00000538744 PIGSQ96S52 555 aa23.3■■□□□ 1.32
DDX55-205ENST00000538744 UBA5Q9GZZ9 404 aa23.3■■□□□ 1.32
DDX55-205ENST00000538744 VAT1LQ9HCJ6 419 aa23.3■■□□□ 1.32
DDX55-205ENST00000538744 PCDHA6Q9UN73 950 aa23.3■■□□□ 1.32
DDX55-205ENST00000538744 PCDHA8Q9Y5H6 950 aa23.3■■□□□ 1.32
DDX55-205ENST00000538744 SPDYE2BA6NHP3 402 aa23.29■■□□□ 1.32
DDX55-205ENST00000538744 SPDYE6P0CI01 402 aa23.29■■□□□ 1.32
DDX55-205ENST00000538744 ATP2B2Q01814 1243 aa23.29■■□□□ 1.32
DDX55-205ENST00000538744 PTGDRQ13258 359 aa23.29■■□□□ 1.32
DDX55-205ENST00000538744 MTFR1LQ9H019 292 aa23.29■■□□□ 1.32
DDX55-205ENST00000538744 C6orf50Q9HD87 102 aa23.29■■□□□ 1.32
DDX55-205ENST00000538744 TUBE1Q9UJT0 475 aa23.29■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 149.3 ms