RNA–Protein interactions for RNA: ENST00000538696.5

CLN6-202, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-202ENST00000538696 APOA5Q6Q788 366 aa20.09■□□□□ 0.81
CLN6-202ENST00000538696 GADL1Q6ZQY3 521 aa20.09■□□□□ 0.81
CLN6-202ENST00000538696 RAB11FIP4Q86YS3 637 aa20.09■□□□□ 0.81
CLN6-202ENST00000538696 PROCA1Q8NCQ7 364 aaPredicted RBP20.09■□□□□ 0.81
CLN6-202ENST00000538696 LPAR1Q92633 364 aa20.09■□□□□ 0.81
CLN6-202ENST00000538696 CHMP4CQ96CF2 233 aa20.09■□□□□ 0.81
CLN6-202ENST00000538696 ZIC5Q96T25 663 aa20.09■□□□□ 0.81
CLN6-202ENST00000538696 CWC22Q9HCG8 908 aaKnown RBP20.09■□□□□ 0.81
CLN6-202ENST00000538696 CCL15-CCL14A0A0B4J2E2 113 aa20.08■□□□□ 0.81
CLN6-202ENST00000538696 CETPP11597 493 aa20.08■□□□□ 0.81
CLN6-202ENST00000538696 EVCP57679 992 aa20.08■□□□□ 0.81
CLN6-202ENST00000538696 TROAPQ12815 778 aa20.08■□□□□ 0.81
CLN6-202ENST00000538696 STK3Q13188 491 aa20.08■□□□□ 0.81
CLN6-202ENST00000538696 CCL15Q16663 113 aa20.08■□□□□ 0.81
CLN6-202ENST00000538696 TREML2Q5T2D2 321 aa20.08■□□□□ 0.81
CLN6-202ENST00000538696 CATIPQ7Z7H3 387 aa20.08■□□□□ 0.81
CLN6-202ENST00000538696 DCAF4Q8WV16 495 aa20.08■□□□□ 0.81
CLN6-202ENST00000538696 GMCL1Q96IK5 515 aa20.08■□□□□ 0.81
CLN6-202ENST00000538696 NUP88Q99567 741 aaPredicted RBP20.08■□□□□ 0.81
CLN6-202ENST00000538696 SLC12A7Q9Y666 1083 aa20.08■□□□□ 0.81
CLN6-202ENST00000538696 TESPA1A2RU30 521 aaPredicted RBP20.07■□□□□ 0.8
CLN6-202ENST00000538696 MANSC4A6NHS7 340 aaPredicted RBP20.07■□□□□ 0.8
CLN6-202ENST00000538696 WDR46O15213 610 aaKnown RBP20.07■□□□□ 0.8
CLN6-202ENST00000538696 AOC2O75106 756 aa20.07■□□□□ 0.8
CLN6-202ENST00000538696 RXRAP19793 462 aa20.07■□□□□ 0.8
CLN6-202ENST00000538696 VEGFBP49765 207 aa20.07■□□□□ 0.8
CLN6-202ENST00000538696 GRM4Q14833 912 aa20.07■□□□□ 0.8
CLN6-202ENST00000538696 FAM83BQ5T0W9 1011 aa20.07■□□□□ 0.8
CLN6-202ENST00000538696 GPAT2Q6NUI2 795 aa20.07■□□□□ 0.8
CLN6-202ENST00000538696 MICU3Q86XE3 530 aa20.07■□□□□ 0.8
CLN6-202ENST00000538696 A0A0G2JMZ2 1700 aa20.07■□□□□ 0.8
CLN6-202ENST00000538696 NID2Q14112 1375 aa20.07■□□□□ 0.8
CLN6-202ENST00000538696 FRMPD2Q68DX3 1309 aaPredicted RBP20.07■□□□□ 0.8
CLN6-202ENST00000538696 WDR33Q9C0J8 1336 aaKnown RBP20.07■□□□□ 0.8
CLN6-202ENST00000538696 GOLGA8BA8MQT2 603 aa20.06■□□□□ 0.8
CLN6-202ENST00000538696 PFKFB2O60825 505 aa20.06■□□□□ 0.8
CLN6-202ENST00000538696 DTNBO60941 627 aa20.06■□□□□ 0.8
CLN6-202ENST00000538696 SLC1A4P43007 532 aa20.06■□□□□ 0.8
CLN6-202ENST00000538696 KIF23Q02241 960 aaPredicted RBP20.06■□□□□ 0.8
CLN6-202ENST00000538696 NOGQ13253 232 aa20.06■□□□□ 0.8
CLN6-202ENST00000538696 FASTKD5Q7L8L6 764 aaKnown RBP20.06■□□□□ 0.8
CLN6-202ENST00000538696 NUP133Q8WUM0 1156 aa20.06■□□□□ 0.8
CLN6-202ENST00000538696 GTF3C6Q969F1 213 aa20.06■□□□□ 0.8
CLN6-202ENST00000538696 AGTPBP1Q9UPW5 1226 aa20.06■□□□□ 0.8
CLN6-202ENST00000538696 HPS5Q9UPZ3 1129 aa20.06■□□□□ 0.8
CLN6-202ENST00000538696 COL11A1P12107 1806 aaPredicted RBP20.06■□□□□ 0.8
CLN6-202ENST00000538696 ZBTB43O43298 467 aa20.05■□□□□ 0.8
CLN6-202ENST00000538696 BMP3P12645 472 aa20.05■□□□□ 0.8
CLN6-202ENST00000538696 ZNF543Q08ER8 600 aa20.05■□□□□ 0.8
CLN6-202ENST00000538696 CCDC96Q2M329 555 aa20.05■□□□□ 0.8
CLN6-202ENST00000538696 SYNE3Q6ZMZ3 975 aa20.05■□□□□ 0.8
CLN6-202ENST00000538696 KCTD1Q719H9 257 aa20.05■□□□□ 0.8
CLN6-202ENST00000538696 CCDC144CPQ8IYA2 1237 aa20.05■□□□□ 0.8
CLN6-202ENST00000538696 PTPN18Q99952 460 aa20.05■□□□□ 0.8
CLN6-202ENST00000538696 RPAP3Q9H6T3 665 aaPredicted RBP20.05■□□□□ 0.8
CLN6-202ENST00000538696 NAP1L2Q9ULW6 460 aaPredicted RBP20.05■□□□□ 0.8
CLN6-202ENST00000538696 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.05■□□□□ 0.8
CLN6-202ENST00000538696 MYH6P13533 1939 aa20.04■□□□□ 0.8
CLN6-202ENST00000538696 BTBD19C9JJ37 291 aa20.04■□□□□ 0.8
CLN6-202ENST00000538696 GOLGA8HP0CJ92 632 aa20.04■□□□□ 0.8
CLN6-202ENST00000538696 CALM1P0DP23 149 aa20.04■□□□□ 0.8
CLN6-202ENST00000538696 CALM2P0DP24 149 aa20.04■□□□□ 0.8
CLN6-202ENST00000538696 CALM3P0DP25 149 aa20.04■□□□□ 0.8
CLN6-202ENST00000538696 PDIA3P30101 505 aaKnown RBP20.04■□□□□ 0.8
CLN6-202ENST00000538696 RCAN1P53805 252 aa20.04■□□□□ 0.8
CLN6-202ENST00000538696 MAP3K14Q99558 947 aa20.04■□□□□ 0.8
CLN6-202ENST00000538696 MAD2L2Q9UI95 211 aa20.04■□□□□ 0.8
CLN6-202ENST00000538696 SMC3Q9UQE7 1217 aa20.04■□□□□ 0.8
CLN6-202ENST00000538696 GOLGA8AA7E2F4 631 aa20.03■□□□□ 0.8
CLN6-202ENST00000538696 IGF2BP3O00425 579 aaKnown RBP eCLIP20.03■□□□□ 0.8
CLN6-202ENST00000538696 PARP1P09874 1014 aaKnown RBP20.03■□□□□ 0.8
CLN6-202ENST00000538696 SCRN1Q12765 414 aa20.03■□□□□ 0.8
CLN6-202ENST00000538696 ASPRV1Q53RT3 343 aa20.03■□□□□ 0.8
CLN6-202ENST00000538696 ANKRD23Q86SG2 305 aa20.03■□□□□ 0.8
CLN6-202ENST00000538696 FAM43AQ8N2R8 423 aa20.03■□□□□ 0.8
CLN6-202ENST00000538696 STAG2Q8N3U4 1231 aa20.03■□□□□ 0.8
CLN6-202ENST00000538696 ZNF274Q96GC6 653 aaPredicted RBP20.03■□□□□ 0.8
CLN6-202ENST00000538696 TANGO6Q9C0B7 1094 aa20.03■□□□□ 0.8
CLN6-202ENST00000538696 GPCPD1Q9NPB8 672 aa20.03■□□□□ 0.8
CLN6-202ENST00000538696 ISY1Q9ULR0 285 aaKnown RBP20.03■□□□□ 0.8
CLN6-202ENST00000538696 BAZ2BQ9UIF8 2168 aaKnown RBP20.03■□□□□ 0.8
CLN6-202ENST00000538696 PALM3A6NDB9 673 aaPredicted RBP20.02■□□□□ 0.8
CLN6-202ENST00000538696 USP17L15C9J2P7 530 aa20.02■□□□□ 0.8
CLN6-202ENST00000538696 USP17L13C9JLJ4 530 aa20.02■□□□□ 0.8
CLN6-202ENST00000538696 USP17L11C9JVI0 530 aa20.02■□□□□ 0.8
CLN6-202ENST00000538696 USP17L18D6R9N7 530 aa20.02■□□□□ 0.8
CLN6-202ENST00000538696 USP17L22D6RA61 530 aa20.02■□□□□ 0.8
CLN6-202ENST00000538696 USP17L17D6RBQ6 530 aa20.02■□□□□ 0.8
CLN6-202ENST00000538696 USP17L19D6RCP7 530 aa20.02■□□□□ 0.8
CLN6-202ENST00000538696 USP17L20D6RJB6 530 aa20.02■□□□□ 0.8
CLN6-202ENST00000538696 HOXA7P31268 230 aaPredicted RBP20.02■□□□□ 0.8
CLN6-202ENST00000538696 METAP2P50579 478 aaKnown RBP eCLIP20.02■□□□□ 0.8
CLN6-202ENST00000538696 USP17L24Q0WX57 530 aa20.02■□□□□ 0.8
CLN6-202ENST00000538696 SREBF2Q12772 1141 aa20.02■□□□□ 0.8
CLN6-202ENST00000538696 PKP1Q13835 747 aa20.02■□□□□ 0.8
CLN6-202ENST00000538696 TTBK2Q6IQ55 1244 aa20.02■□□□□ 0.8
CLN6-202ENST00000538696 CATSPERGQ6ZRH7 1159 aa20.02■□□□□ 0.8
CLN6-202ENST00000538696 FANCBQ8NB91 859 aa20.02■□□□□ 0.8
CLN6-202ENST00000538696 CTCFLQ8NI51 663 aaPredicted RBP20.02■□□□□ 0.8
CLN6-202ENST00000538696 TMEM232C9JQI7 657 aa20.02■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 470.3 ms