RNA–Protein interactions for RNA: ENST00000538654.5

SNHG1-209, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 2,768 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-209ENST00000538654 GSDMAQ96QA5 445 aa10.12□□□□□ -0.79
SNHG1-209ENST00000538654 NUP88Q99567 741 aaPredicted RBP10.12□□□□□ -0.79
SNHG1-209ENST00000538654 TBC1D2BQ9UPU7 963 aa10.12□□□□□ -0.79
SNHG1-209ENST00000538654 SRPRBQ9Y5M8 271 aaKnown RBP10.12□□□□□ -0.79
SNHG1-209ENST00000538654 ADAMTS7Q9UKP4 1686 aa10.12□□□□□ -0.79
SNHG1-209ENST00000538654 SSRP1Q08945 709 aaKnown RBP10.12□□□□□ -0.79
SNHG1-209ENST00000538654 BIRC2Q13490 618 aa10.12□□□□□ -0.79
SNHG1-209ENST00000538654 RAB11FIP4Q86YS3 637 aa10.12□□□□□ -0.79
SNHG1-209ENST00000538654 LIMA1Q9UHB6 759 aaKnown RBP10.12□□□□□ -0.79
SNHG1-209ENST00000538654 TMA7Q9Y2S6 64 aaKnown RBP10.12□□□□□ -0.79
SNHG1-209ENST00000538654 EPN1Q9Y6I3 576 aaPredicted RBP10.12□□□□□ -0.79
SNHG1-209ENST00000538654 MYO5AQ9Y4I1 1855 aaKnown RBP10.12□□□□□ -0.79
SNHG1-209ENST00000538654 RGPD2P0DJD1 1756 aa10.12□□□□□ -0.79
SNHG1-209ENST00000538654 A0A087WZG4 1122 aa10.11□□□□□ -0.79
SNHG1-209ENST00000538654 H0YHG0 523 aa10.11□□□□□ -0.79
SNHG1-209ENST00000538654 SH2B2O14492 632 aaPredicted RBP10.11□□□□□ -0.79
SNHG1-209ENST00000538654 N4BP3O15049 544 aa10.11□□□□□ -0.79
SNHG1-209ENST00000538654 ZBTB43O43298 467 aa10.11□□□□□ -0.79
SNHG1-209ENST00000538654 PPP1R37O75864 691 aa10.11□□□□□ -0.79
SNHG1-209ENST00000538654 FSBPO95073 299 aa10.11□□□□□ -0.79
SNHG1-209ENST00000538654 MYL6BP14649 208 aa10.11□□□□□ -0.79
SNHG1-209ENST00000538654 RDXP35241 583 aaKnown RBP10.11□□□□□ -0.79
SNHG1-209ENST00000538654 GNGT1P63211 74 aa10.11□□□□□ -0.79
SNHG1-209ENST00000538654 KRT83P78385 493 aa10.11□□□□□ -0.79
SNHG1-209ENST00000538654 APOA5Q6Q788 366 aa10.11□□□□□ -0.79
SNHG1-209ENST00000538654 KCNH5Q8NCM2 988 aa10.11□□□□□ -0.79
SNHG1-209ENST00000538654 BANK1Q8NDB2 785 aa10.11□□□□□ -0.79
SNHG1-209ENST00000538654 APPBP2Q92624 585 aa10.11□□□□□ -0.79
SNHG1-209ENST00000538654 SLF1Q9BQI6 1058 aa10.11□□□□□ -0.79
SNHG1-209ENST00000538654 FOXP1Q9H334 677 aaPredicted RBP10.11□□□□□ -0.79
SNHG1-209ENST00000538654 GUCA1BQ9UMX6 200 aa10.11□□□□□ -0.79
SNHG1-209ENST00000538654 NFAT5O94916 1531 aa10.11□□□□□ -0.79
SNHG1-209ENST00000538654 ABCC12Q96J65 1359 aa10.11□□□□□ -0.79
SNHG1-209ENST00000538654 ANO9A1A5B4 782 aa10.11□□□□□ -0.79
SNHG1-209ENST00000538654 LRRC10BA6NIK2 292 aa10.11□□□□□ -0.79
SNHG1-209ENST00000538654 AGPSO00116 658 aa10.11□□□□□ -0.79
SNHG1-209ENST00000538654 NDUFA10O95299 355 aa10.11□□□□□ -0.79
SNHG1-209ENST00000538654 TFRCP02786 760 aaKnown RBP10.11□□□□□ -0.79
SNHG1-209ENST00000538654 EPB41P11171 864 aaKnown RBP10.11□□□□□ -0.79
SNHG1-209ENST00000538654 SKOR1P84550 965 aa10.11□□□□□ -0.79
SNHG1-209ENST00000538654 ENOX2Q16206 610 aaKnown RBP10.11□□□□□ -0.79
SNHG1-209ENST00000538654 SKIDA1Q1XH10 827 aa10.11□□□□□ -0.79
SNHG1-209ENST00000538654 SPECC1Q5M775 1068 aa10.11□□□□□ -0.79
SNHG1-209ENST00000538654 ALS2CLQ60I27 953 aa10.11□□□□□ -0.79
SNHG1-209ENST00000538654 KCNV1Q6PIU1 500 aa10.11□□□□□ -0.79
SNHG1-209ENST00000538654 LMBR1LQ6UX01 489 aa10.11□□□□□ -0.79
SNHG1-209ENST00000538654 ATG9AQ7Z3C6 839 aa10.11□□□□□ -0.79
SNHG1-209ENST00000538654 RPUSD2Q8IZ73 545 aaKnown RBP10.11□□□□□ -0.79
SNHG1-209ENST00000538654 SDR16C5Q8N3Y7 309 aa10.11□□□□□ -0.79
SNHG1-209ENST00000538654 OTUD6BQ8N6M0 293 aa10.11□□□□□ -0.79
SNHG1-209ENST00000538654 CAGE1Q8TC20 777 aa10.11□□□□□ -0.79
SNHG1-209ENST00000538654 MMS19Q96T76 1030 aa10.11□□□□□ -0.79
SNHG1-209ENST00000538654 C5P01031 1676 aa10.11□□□□□ -0.79
SNHG1-209ENST00000538654 PXDNQ92626 1479 aa10.1□□□□□ -0.79
SNHG1-209ENST00000538654 TIMM10P62072 90 aa10.1□□□□□ -0.79
SNHG1-209ENST00000538654 FBXW10Q5XX13 1052 aa10.1□□□□□ -0.79
SNHG1-209ENST00000538654 KLHL10Q6JEL2 608 aa10.1□□□□□ -0.79
SNHG1-209ENST00000538654 YTHDF3Q7Z739 585 aaKnown RBP10.1□□□□□ -0.79
SNHG1-209ENST00000538654 GIMAP7Q8NHV1 300 aa10.1□□□□□ -0.79
SNHG1-209ENST00000538654 CXorf38Q8TB03 319 aa10.1□□□□□ -0.79
SNHG1-209ENST00000538654 AENQ8WTP8 325 aaKnown RBP10.1□□□□□ -0.79
SNHG1-209ENST00000538654 SH3GL2Q99962 352 aa10.1□□□□□ -0.79
SNHG1-209ENST00000538654 FBXO9Q9UK97 447 aaPredicted RBP10.1□□□□□ -0.79
SNHG1-209ENST00000538654 SUFUQ9UMX1 484 aa10.1□□□□□ -0.79
SNHG1-209ENST00000538654 SETD1BQ9UPS6 1966 aaKnown RBP10.1□□□□□ -0.79
SNHG1-209ENST00000538654 ARFGEF2Q9Y6D5 1785 aa10.1□□□□□ -0.79
SNHG1-209ENST00000538654 MST1RQ04912 1400 aa10.1□□□□□ -0.79
SNHG1-209ENST00000538654 MYH7P12883 1935 aa10.1□□□□□ -0.79
SNHG1-209ENST00000538654 GOLGA8AA7E2F4 631 aa10.1□□□□□ -0.79
SNHG1-209ENST00000538654 IRF6O14896 467 aa10.1□□□□□ -0.79
SNHG1-209ENST00000538654 FOXP2O15409 715 aa10.1□□□□□ -0.79
SNHG1-209ENST00000538654 KRT86O43790 486 aa10.1□□□□□ -0.79
SNHG1-209ENST00000538654 ZEB2O60315 1214 aa10.1□□□□□ -0.79
SNHG1-209ENST00000538654 CIAO1O76071 339 aa10.1□□□□□ -0.79
SNHG1-209ENST00000538654 MMP1P03956 469 aa10.1□□□□□ -0.79
SNHG1-209ENST00000538654 SCP2P22307 547 aa10.1□□□□□ -0.79
SNHG1-209ENST00000538654 KRT9P35527 623 aa10.1□□□□□ -0.79
SNHG1-209ENST00000538654 C4orf46Q504U0 113 aa10.1□□□□□ -0.79
SNHG1-209ENST00000538654 SDE2Q6IQ49 451 aa10.1□□□□□ -0.79
SNHG1-209ENST00000538654 JAZF1Q86VZ6 243 aa10.1□□□□□ -0.79
SNHG1-209ENST00000538654 ANKRD18AQ8IVF6 992 aa10.1□□□□□ -0.79
SNHG1-209ENST00000538654 RIN2Q8WYP3 895 aaPredicted RBP10.1□□□□□ -0.79
SNHG1-209ENST00000538654 PHKBQ93100 1093 aa10.1□□□□□ -0.79
SNHG1-209ENST00000538654 JAKMIP2Q96AA8 810 aa10.1□□□□□ -0.79
SNHG1-209ENST00000538654 RUFY1Q96T51 708 aa10.1□□□□□ -0.79
SNHG1-209ENST00000538654 MPHOSPH6Q99547 160 aaKnown RBP10.1□□□□□ -0.79
SNHG1-209ENST00000538654 CAPN7Q9Y6W3 813 aa10.1□□□□□ -0.79
SNHG1-209ENST00000538654 GRIN2DO15399 1336 aa10.1□□□□□ -0.79
SNHG1-209ENST00000538654 UBN2Q6ZU65 1347 aa10.1□□□□□ -0.79
SNHG1-209ENST00000538654 NDUFAB1O14561 156 aa10.09□□□□□ -0.79
SNHG1-209ENST00000538654 CHUKO15111 745 aa10.09□□□□□ -0.79
SNHG1-209ENST00000538654 FMNL1O95466 1100 aaPredicted RBP10.09□□□□□ -0.79
SNHG1-209ENST00000538654 ITIH3Q06033 890 aa10.09□□□□□ -0.79
SNHG1-209ENST00000538654 NTRK3Q16288 839 aa10.09□□□□□ -0.79
SNHG1-209ENST00000538654 ZNF790Q6PG37 636 aa10.09□□□□□ -0.79
SNHG1-209ENST00000538654 NFXL1Q6ZNB6 911 aa10.09□□□□□ -0.79
SNHG1-209ENST00000538654 TRIM22Q8IYM9 498 aa10.09□□□□□ -0.79
SNHG1-209ENST00000538654 GRAMD1CQ8IYS0 662 aa10.09□□□□□ -0.79
SNHG1-209ENST00000538654 OR8K1Q8NGG5 319 aa10.09□□□□□ -0.79
SNHG1-209ENST00000538654 PAGR1Q9BTK6 254 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms