RNA–Protein interactions for RNA: ENST00000538485.6

EFCAB11-202, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 2 BASIC

Gene EFCAB11, Length 1,870 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-202ENST00000538485 PFKFB3Q16875 520 aaPredicted RBP22.55■■□□□ 1.2
EFCAB11-202ENST00000538485 SLFN13Q68D06 897 aa22.55■■□□□ 1.2
EFCAB11-202ENST00000538485 KCTD1Q719H9 257 aa22.55■■□□□ 1.2
EFCAB11-202ENST00000538485 CCDC84Q86UT8 332 aaPredicted RBP22.55■■□□□ 1.2
EFCAB11-202ENST00000538485 ZC3H15Q8WU90 426 aaKnown RBP22.55■■□□□ 1.2
EFCAB11-202ENST00000538485 ARHGEF10LQ9HCE6 1279 aa22.55■■□□□ 1.2
EFCAB11-202ENST00000538485 GPCPD1Q9NPB8 672 aa22.55■■□□□ 1.2
EFCAB11-202ENST00000538485 VPS54Q9P1Q0 977 aa22.55■■□□□ 1.2
EFCAB11-202ENST00000538485 RBM27Q9P2N5 1060 aaKnown RBP22.55■■□□□ 1.2
EFCAB11-202ENST00000538485 KCNJ14Q9UNX9 436 aa22.55■■□□□ 1.2
EFCAB11-202ENST00000538485 ADM5C9JUS6 153 aa22.54■■□□□ 1.2
EFCAB11-202ENST00000538485 SCG2P13521 617 aa22.54■■□□□ 1.2
EFCAB11-202ENST00000538485 SUPT20HL1Q3ZLR7 823 aa22.54■■□□□ 1.2
EFCAB11-202ENST00000538485 GPATCH4Q5T3I0 446 aaKnown RBP22.54■■□□□ 1.2
EFCAB11-202ENST00000538485 ZNF112Q9UJU3 913 aa22.54■■□□□ 1.2
EFCAB11-202ENST00000538485 SYNPO2Q9UMS6 1093 aa22.54■■□□□ 1.2
EFCAB11-202ENST00000538485 TMX2Q9Y320 296 aa22.54■■□□□ 1.2
EFCAB11-202ENST00000538485 DDX11L8A8MPP1 907 aa22.54■■□□□ 1.2
EFCAB11-202ENST00000538485 NDUFB10O96000 172 aa22.54■■□□□ 1.2
EFCAB11-202ENST00000538485 SLC1A4P43007 532 aa22.54■■□□□ 1.2
EFCAB11-202ENST00000538485 KIF23Q02241 960 aaPredicted RBP22.54■■□□□ 1.2
EFCAB11-202ENST00000538485 CCDC96Q2M329 555 aa22.54■■□□□ 1.2
EFCAB11-202ENST00000538485 TTBK2Q6IQ55 1244 aa22.54■■□□□ 1.2
EFCAB11-202ENST00000538485 KRT26Q7Z3Y9 468 aa22.54■■□□□ 1.2
EFCAB11-202ENST00000538485 GLIS2Q9BZE0 524 aaPredicted RBP22.54■■□□□ 1.2
EFCAB11-202ENST00000538485 RIOX1Q9H6W3 641 aa22.54■■□□□ 1.2
EFCAB11-202ENST00000538485 CNPY2Q9Y2B0 182 aa22.54■■□□□ 1.2
EFCAB11-202ENST00000538485 WDR90Q96KV7 1748 aa22.53■■□□□ 1.2
EFCAB11-202ENST00000538485 KIF28PB7ZC32 967 aa22.53■■□□□ 1.2
EFCAB11-202ENST00000538485 MMP1P03956 469 aa22.53■■□□□ 1.2
EFCAB11-202ENST00000538485 DCAF4Q8WV16 495 aa22.53■■□□□ 1.2
EFCAB11-202ENST00000538485 WRNIP1Q96S55 665 aa22.53■■□□□ 1.2
EFCAB11-202ENST00000538485 GDPD2Q9HCC8 539 aa22.53■■□□□ 1.2
EFCAB11-202ENST00000538485 VAT1LQ9HCJ6 419 aa22.53■■□□□ 1.2
EFCAB11-202ENST00000538485 GOLGA6L22H0YM25 854 aa22.52■■□□□ 1.2
EFCAB11-202ENST00000538485 EAPPQ56P03 285 aaPredicted RBP22.52■■□□□ 1.2
EFCAB11-202ENST00000538485 ZKSCAN4Q969J2 545 aaPredicted RBP22.52■■□□□ 1.2
EFCAB11-202ENST00000538485 KLRG1Q96E93 195 aa22.52■■□□□ 1.2
EFCAB11-202ENST00000538485 GMCL1Q96IK5 515 aa22.52■■□□□ 1.2
EFCAB11-202ENST00000538485 XBP1P17861 261 aa22.51■■□□□ 1.19
EFCAB11-202ENST00000538485 KIAA1755Q5JYT7 1200 aa22.51■■□□□ 1.19
EFCAB11-202ENST00000538485 SPICE1Q8N0Z3 855 aa22.51■■□□□ 1.19
EFCAB11-202ENST00000538485 NUP88Q99567 741 aaPredicted RBP22.51■■□□□ 1.19
EFCAB11-202ENST00000538485 NCLP19338 710 aaKnown RBP22.51■■□□□ 1.19
EFCAB11-202ENST00000538485 SLC16A2P36021 539 aa22.51■■□□□ 1.19
EFCAB11-202ENST00000538485 HOMER1Q86YM7 354 aa22.51■■□□□ 1.19
EFCAB11-202ENST00000538485 PIGSQ96S52 555 aa22.51■■□□□ 1.19
EFCAB11-202ENST00000538485 PHF20Q9BVI0 1012 aa22.51■■□□□ 1.19
EFCAB11-202ENST00000538485 GINM1Q9NU53 330 aa22.51■■□□□ 1.19
EFCAB11-202ENST00000538485 PNMA8AQ86V59 439 aaPredicted RBP22.5■■□□□ 1.19
EFCAB11-202ENST00000538485 GPKOWQ92917 476 aaPredicted RBP eCLIP22.5■■□□□ 1.19
EFCAB11-202ENST00000538485 RRP36Q96EU6 259 aaKnown RBP22.5■■□□□ 1.19
EFCAB11-202ENST00000538485 ISY1Q9ULR0 285 aaKnown RBP22.5■■□□□ 1.19
EFCAB11-202ENST00000538485 BTBD18B2RXH4 712 aa22.49■■□□□ 1.19
EFCAB11-202ENST00000538485 PRPF40AO75400 957 aaKnown RBP22.49■■□□□ 1.19
EFCAB11-202ENST00000538485 U2AF2P26368 475 aaKnown RBP eCLIP22.49■■□□□ 1.19
EFCAB11-202ENST00000538485 PRKG1Q13976 671 aa22.49■■□□□ 1.19
EFCAB11-202ENST00000538485 USP48Q86UV5 1035 aa22.49■■□□□ 1.19
EFCAB11-202ENST00000538485 DIS3L2Q8IYB7 885 aaKnown RBP22.49■■□□□ 1.19
EFCAB11-202ENST00000538485 SCYL3Q8IZE3 742 aa22.49■■□□□ 1.19
EFCAB11-202ENST00000538485 ADGRF4Q8IZF3 695 aa22.49■■□□□ 1.19
EFCAB11-202ENST00000538485 JMJD4Q9H9V9 463 aa22.49■■□□□ 1.19
EFCAB11-202ENST00000538485 GOPCQ9HD26 462 aa22.49■■□□□ 1.19
EFCAB11-202ENST00000538485 LMBRD1Q9NUN5 540 aa22.49■■□□□ 1.19
EFCAB11-202ENST00000538485 MYH15Q9Y2K3 1946 aa22.49■■□□□ 1.19
EFCAB11-202ENST00000538485 DOCK1Q14185 1865 aa22.49■■□□□ 1.19
EFCAB11-202ENST00000538485 KRT85P78386 507 aa22.49■■□□□ 1.19
EFCAB11-202ENST00000538485 ZYXQ15942 572 aaKnown RBP22.49■■□□□ 1.19
EFCAB11-202ENST00000538485 WWC2Q6AWC2 1192 aa22.49■■□□□ 1.19
EFCAB11-202ENST00000538485 TYW1BQ6NUM6 668 aa22.49■■□□□ 1.19
EFCAB11-202ENST00000538485 BRAPQ7Z569 592 aa22.49■■□□□ 1.19
EFCAB11-202ENST00000538485 SH2D4AQ9H788 454 aa22.49■■□□□ 1.19
EFCAB11-202ENST00000538485 VCPKMTQ9H867 229 aa22.49■■□□□ 1.19
EFCAB11-202ENST00000538485 TFIP11Q9UBB9 837 aaKnown RBP22.49■■□□□ 1.19
EFCAB11-202ENST00000538485 FIBPO43427 364 aa22.48■■□□□ 1.19
EFCAB11-202ENST00000538485 USP2O75604 605 aaPredicted RBP22.48■■□□□ 1.19
EFCAB11-202ENST00000538485 BMP3P12645 472 aa22.48■■□□□ 1.19
EFCAB11-202ENST00000538485 SAFBQ15424 915 aaKnown RBP eCLIP22.48■■□□□ 1.19
EFCAB11-202ENST00000538485 NPY5RQ15761 445 aa22.48■■□□□ 1.19
EFCAB11-202ENST00000538485 OXER1Q8TDS5 423 aa22.48■■□□□ 1.19
EFCAB11-202ENST00000538485 SEC63Q9UGP8 760 aaKnown RBP22.48■■□□□ 1.19
EFCAB11-202ENST00000538485 POTEIP0CG38 1075 aa22.47■■□□□ 1.19
EFCAB11-202ENST00000538485 POTEJP0CG39 1038 aa22.47■■□□□ 1.19
EFCAB11-202ENST00000538485 HEATR3Q7Z4Q2 680 aa22.47■■□□□ 1.19
EFCAB11-202ENST00000538485 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.47■■□□□ 1.19
EFCAB11-202ENST00000538485 BARHL2Q9NY43 387 aa22.47■■□□□ 1.19
EFCAB11-202ENST00000538485 USP17L10C9JJH3 530 aa22.47■■□□□ 1.19
EFCAB11-202ENST00000538485 NR5A1Q13285 461 aa22.47■■□□□ 1.19
EFCAB11-202ENST00000538485 GNL2Q13823 731 aaKnown RBP22.47■■□□□ 1.19
EFCAB11-202ENST00000538485 FOXP1Q9H334 677 aaPredicted RBP22.47■■□□□ 1.19
EFCAB11-202ENST00000538485 SH3GLB2Q9NR46 395 aa22.47■■□□□ 1.19
EFCAB11-202ENST00000538485 TMEM232C9JQI7 657 aa22.46■■□□□ 1.19
EFCAB11-202ENST00000538485 PTPRAP18433 802 aa22.46■■□□□ 1.19
EFCAB11-202ENST00000538485 MYSM1Q5VVJ2 828 aa22.46■■□□□ 1.19
EFCAB11-202ENST00000538485 MTMR8Q96EF0 704 aa22.46■■□□□ 1.19
EFCAB11-202ENST00000538485 CDCA5Q96FF9 252 aa22.46■■□□□ 1.19
EFCAB11-202ENST00000538485 FEZ1Q99689 392 aa22.46■■□□□ 1.19
EFCAB11-202ENST00000538485 STXBP3O00186 592 aa22.45■■□□□ 1.19
EFCAB11-202ENST00000538485 NOSTRINQ8IVI9 506 aa22.45■■□□□ 1.19
EFCAB11-202ENST00000538485 TMEM87AQ8NBN3 555 aa22.45■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms