RNA–Protein interactions for RNA: ENST00000538410.5

COPS7A-208, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3 BASIC

Gene COPS7A, Length 1,610 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-208ENST00000538410 KIF5BP33176 963 aa23.92■■□□□ 1.42
COPS7A-208ENST00000538410 GINM1Q9NU53 330 aa23.92■■□□□ 1.42
COPS7A-208ENST00000538410 ZNF112Q9UJU3 913 aa23.92■■□□□ 1.42
COPS7A-208ENST00000538410 CTNND1O60716 968 aaKnown RBP23.92■■□□□ 1.42
COPS7A-208ENST00000538410 ASNSP08243 561 aa23.92■■□□□ 1.42
COPS7A-208ENST00000538410 NUCB2P80303 420 aa23.92■■□□□ 1.42
COPS7A-208ENST00000538410 SPRYD7Q5W111 196 aa23.92■■□□□ 1.42
COPS7A-208ENST00000538410 CLMNQ96JQ2 1002 aa23.92■■□□□ 1.42
COPS7A-208ENST00000538410 PPFIA3O75145 1194 aa23.91■■□□□ 1.42
COPS7A-208ENST00000538410 CAPN15O75808 1086 aa23.91■■□□□ 1.42
COPS7A-208ENST00000538410 FDPSP14324 419 aaKnown RBP23.91■■□□□ 1.42
COPS7A-208ENST00000538410 TMTC3Q6ZXV5 915 aa23.91■■□□□ 1.42
COPS7A-208ENST00000538410 ANKRD13AQ8IZ07 590 aa23.91■■□□□ 1.42
COPS7A-208ENST00000538410 FAM184AQ8NB25 1140 aa23.91■■□□□ 1.42
COPS7A-208ENST00000538410 MAD2L2Q9UI95 211 aa23.91■■□□□ 1.42
COPS7A-208ENST00000538410 MTMR7Q9Y216 660 aa23.91■■□□□ 1.42
COPS7A-208ENST00000538410 OTOFQ9HC10 1997 aa23.9■■□□□ 1.42
COPS7A-208ENST00000538410 PDCP20941 246 aa23.9■■□□□ 1.42
COPS7A-208ENST00000538410 SYT1P21579 422 aa23.9■■□□□ 1.42
COPS7A-208ENST00000538410 TM4SF4P48230 202 aa23.9■■□□□ 1.42
COPS7A-208ENST00000538410 SREBF2Q12772 1141 aa23.9■■□□□ 1.42
COPS7A-208ENST00000538410 NBPF11Q86T75 865 aa23.9■■□□□ 1.42
COPS7A-208ENST00000538410 PHKBQ93100 1093 aa23.9■■□□□ 1.42
COPS7A-208ENST00000538410 ORC3Q9UBD5 711 aaPredicted RBP23.9■■□□□ 1.42
COPS7A-208ENST00000538410 KIF3AQ9Y496 699 aa23.9■■□□□ 1.42
COPS7A-208ENST00000538410 STK36Q9NRP7 1315 aa23.9■■□□□ 1.42
COPS7A-208ENST00000538410 PHIPQ8WWQ0 1821 aa23.89■■□□□ 1.42
COPS7A-208ENST00000538410 PALM3A6NDB9 673 aaPredicted RBP23.89■■□□□ 1.42
COPS7A-208ENST00000538410 PLEKHA8P1O95397 391 aa23.89■■□□□ 1.42
COPS7A-208ENST00000538410 SSRP1Q08945 709 aaKnown RBP23.89■■□□□ 1.42
COPS7A-208ENST00000538410 PKP1Q13835 747 aa23.89■■□□□ 1.42
COPS7A-208ENST00000538410 LARP1BQ659C4 914 aaKnown RBP23.89■■□□□ 1.42
COPS7A-208ENST00000538410 CMTR1Q8N1G2 835 aaKnown RBP23.89■■□□□ 1.42
COPS7A-208ENST00000538410 ARHGEF10LQ9HCE6 1279 aa23.89■■□□□ 1.42
COPS7A-208ENST00000538410 SYNPO2Q9UMS6 1093 aa23.89■■□□□ 1.42
COPS7A-208ENST00000538410 BAZ2BQ9UIF8 2168 aaKnown RBP23.89■■□□□ 1.41
COPS7A-208ENST00000538410 USP17L5A8MUK1 530 aa23.88■■□□□ 1.41
COPS7A-208ENST00000538410 FMNL1O95466 1100 aaPredicted RBP23.88■■□□□ 1.41
COPS7A-208ENST00000538410 SNHG28P0DPA3 235 aa23.88■■□□□ 1.41
COPS7A-208ENST00000538410 PDHBP11177 359 aa23.88■■□□□ 1.41
COPS7A-208ENST00000538410 INPP5BP32019 993 aa23.88■■□□□ 1.41
COPS7A-208ENST00000538410 GNAQP50148 359 aa23.88■■□□□ 1.41
COPS7A-208ENST00000538410 FUT2Q10981 343 aa23.88■■□□□ 1.41
COPS7A-208ENST00000538410 STAG2Q8N3U4 1231 aa23.88■■□□□ 1.41
COPS7A-208ENST00000538410 WNK4Q96J92 1243 aa23.88■■□□□ 1.41
COPS7A-208ENST00000538410 STX6O43752 255 aa23.88■■□□□ 1.41
COPS7A-208ENST00000538410 PARP1P09874 1014 aaKnown RBP23.88■■□□□ 1.41
COPS7A-208ENST00000538410 ZBTB48P10074 688 aaPredicted RBP23.88■■□□□ 1.41
COPS7A-208ENST00000538410 PDIA4P13667 645 aaKnown RBP23.88■■□□□ 1.41
COPS7A-208ENST00000538410 RASGRP2Q7LDG7 609 aa23.88■■□□□ 1.41
COPS7A-208ENST00000538410 TRIM22Q8IYM9 498 aa23.88■■□□□ 1.41
COPS7A-208ENST00000538410 CCDC82Q8N4S0 544 aa23.88■■□□□ 1.41
COPS7A-208ENST00000538410 SRBD1Q8N5C6 995 aaKnown RBP23.88■■□□□ 1.41
COPS7A-208ENST00000538410 WRNIP1Q96S55 665 aa23.88■■□□□ 1.41
COPS7A-208ENST00000538410 SLC26A6Q9BXS9 759 aa23.88■■□□□ 1.41
COPS7A-208ENST00000538410 FRMD4AQ9P2Q2 1039 aaPredicted RBP23.88■■□□□ 1.41
COPS7A-208ENST00000538410 A0A1W2PRG0 241 aa23.87■■□□□ 1.41
COPS7A-208ENST00000538410 USP17L2Q6R6M4 530 aa23.87■■□□□ 1.41
COPS7A-208ENST00000538410 GMCL1P1Q8NEA9 526 aa23.87■■□□□ 1.41
COPS7A-208ENST00000538410 RNF26Q9BY78 433 aaPredicted RBP23.87■■□□□ 1.41
COPS7A-208ENST00000538410 ZDHHC9Q9Y397 364 aa23.87■■□□□ 1.41
COPS7A-208ENST00000538410 MANSC4A6NHS7 340 aaPredicted RBP23.86■■□□□ 1.41
COPS7A-208ENST00000538410 ASPRV1Q53RT3 343 aa23.86■■□□□ 1.41
COPS7A-208ENST00000538410 SCYL3Q8IZE3 742 aa23.86■■□□□ 1.41
COPS7A-208ENST00000538410 LZTS2Q9BRK4 669 aa23.86■■□□□ 1.41
COPS7A-208ENST00000538410 TMX2Q9Y320 296 aa23.86■■□□□ 1.41
COPS7A-208ENST00000538410 CNTNAP5Q8WYK1 1306 aa23.86■■□□□ 1.41
COPS7A-208ENST00000538410 BRD1O95696 1058 aa23.85■■□□□ 1.41
COPS7A-208ENST00000538410 GOLGA8HP0CJ92 632 aa23.85■■□□□ 1.41
COPS7A-208ENST00000538410 INHBEP58166 350 aa23.85■■□□□ 1.41
COPS7A-208ENST00000538410 MAP3K9P80192 1104 aa23.85■■□□□ 1.41
COPS7A-208ENST00000538410 SLFN13Q68D06 897 aa23.85■■□□□ 1.41
COPS7A-208ENST00000538410 ACER1Q8TDN7 264 aa23.85■■□□□ 1.41
COPS7A-208ENST00000538410 ZKSCAN4Q969J2 545 aaPredicted RBP23.85■■□□□ 1.41
COPS7A-208ENST00000538410 KLRF2D3W0D1 207 aa23.84■■□□□ 1.41
COPS7A-208ENST00000538410 F5H6K3 240 aa23.84■■□□□ 1.41
COPS7A-208ENST00000538410 PRPF3O43395 683 aaKnown RBP23.84■■□□□ 1.41
COPS7A-208ENST00000538410 KLRC3Q07444 240 aa23.84■■□□□ 1.41
COPS7A-208ENST00000538410 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.84■■□□□ 1.413e-6■■■□□ 14.6
COPS7A-208ENST00000538410 DCAF4Q8WV16 495 aa23.84■■□□□ 1.41
COPS7A-208ENST00000538410 ELP3Q9H9T3 547 aa23.84■■□□□ 1.41
COPS7A-208ENST00000538410 DEXIO95424 95 aa23.84■■□□□ 1.41
COPS7A-208ENST00000538410 ZNF543Q08ER8 600 aa23.84■■□□□ 1.41
COPS7A-208ENST00000538410 NOL9Q5SY16 702 aaKnown RBP23.84■■□□□ 1.41
COPS7A-208ENST00000538410 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.84■■□□□ 1.41
COPS7A-208ENST00000538410 SH2D4AQ9H788 454 aa23.84■■□□□ 1.41
COPS7A-208ENST00000538410 MTMR6Q9Y217 621 aa23.84■■□□□ 1.41
COPS7A-208ENST00000538410 CSADQ9Y600 493 aa23.84■■□□□ 1.41
COPS7A-208ENST00000538410 TBC1D8O95759 1140 aa23.83■■□□□ 1.41
COPS7A-208ENST00000538410 SMARCA1P28370 1054 aa23.83■■□□□ 1.41
COPS7A-208ENST00000538410 AKAP17AQ02040 695 aaKnown RBP23.83■■□□□ 1.41
COPS7A-208ENST00000538410 GPATCH4Q5T3I0 446 aaKnown RBP23.83■■□□□ 1.41
COPS7A-208ENST00000538410 CCDC84Q86UT8 332 aaPredicted RBP23.83■■□□□ 1.41
COPS7A-208ENST00000538410 WASF1Q92558 559 aa23.83■■□□□ 1.41
COPS7A-208ENST00000538410 ALG1Q9BT22 464 aa23.83■■□□□ 1.41
COPS7A-208ENST00000538410 FRMPD2Q68DX3 1309 aaPredicted RBP23.83■■□□□ 1.41
COPS7A-208ENST00000538410 VPS37CA5D8V6 355 aaPredicted RBP23.82■■□□□ 1.4
COPS7A-208ENST00000538410 NDUFB10O96000 172 aa23.82■■□□□ 1.4
COPS7A-208ENST00000538410 ZSCAN22P10073 491 aaPredicted RBP23.82■■□□□ 1.4
COPS7A-208ENST00000538410 OPTNQ96CV9 577 aa23.82■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms