RNA–Protein interactions for RNA: ENST00000538176.5

CCDC78-215, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,166 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-215ENST00000538176 CLIP2Q9UDT6 1046 aa25.5■■□□□ 1.67
CCDC78-215ENST00000538176 GREB1LQ9C091 1923 aaPredicted RBP25.49■■□□□ 1.67
CCDC78-215ENST00000538176 PLXNB2O15031 1838 aa25.49■■□□□ 1.67
CCDC78-215ENST00000538176 PLIN4Q96Q06 1357 aa25.49■■□□□ 1.67
CCDC78-215ENST00000538176 HIP1O00291 1037 aa25.49■■□□□ 1.67
CCDC78-215ENST00000538176 RAD21O60216 631 aa25.49■■□□□ 1.67
CCDC78-215ENST00000538176 PRDM1O75626 825 aa25.49■■□□□ 1.67
CCDC78-215ENST00000538176 COPB2P35606 906 aa25.49■■□□□ 1.67
CCDC78-215ENST00000538176 ABRAQ8N0Z2 381 aa25.49■■□□□ 1.67
CCDC78-215ENST00000538176 ANKLE1Q8NAG6 615 aa25.49■■□□□ 1.67
CCDC78-215ENST00000538176 TFAP4Q01664 338 aa25.48■■□□□ 1.67
CCDC78-215ENST00000538176 MFSD14CQ5VZR4 134 aa25.48■■□□□ 1.67
CCDC78-215ENST00000538176 CCDC129Q6ZRS4 1044 aa25.48■■□□□ 1.67
CCDC78-215ENST00000538176 ATG4CQ96DT6 458 aa25.48■■□□□ 1.67
CCDC78-215ENST00000538176 CEP95Q96GE4 821 aa25.48■■□□□ 1.67
CCDC78-215ENST00000538176 PPP1R9AQ9ULJ8 1098 aa25.48■■□□□ 1.67
CCDC78-215ENST00000538176 ZMYM6O95789 1325 aa25.47■■□□□ 1.67
CCDC78-215ENST00000538176 ERCC3P19447 782 aa25.47■■□□□ 1.67
CCDC78-215ENST00000538176 PLS1Q14651 629 aa25.47■■□□□ 1.67
CCDC78-215ENST00000538176 UBE2Q1Q7Z7E8 422 aa25.47■■□□□ 1.67
CCDC78-215ENST00000538176 DPP9Q86TI2 863 aa25.47■■□□□ 1.67
CCDC78-215ENST00000538176 PRPF38AQ8NAV1 312 aaKnown RBP25.47■■□□□ 1.67
CCDC78-215ENST00000538176 GMCL1P1Q8NEA9 526 aa25.47■■□□□ 1.67
CCDC78-215ENST00000538176 RLFQ13129 1914 aa25.47■■□□□ 1.67
CCDC78-215ENST00000538176 VWA5AO00534 786 aa25.46■■□□□ 1.67
CCDC78-215ENST00000538176 FARP2O94887 1054 aaPredicted RBP25.46■■□□□ 1.67
CCDC78-215ENST00000538176 PRKAR2AP13861 404 aaKnown RBP25.46■■□□□ 1.67
CCDC78-215ENST00000538176 SDSP20132 328 aa25.46■■□□□ 1.67
CCDC78-215ENST00000538176 FAM83BQ5T0W9 1011 aa25.46■■□□□ 1.67
CCDC78-215ENST00000538176 FAM227BQ96M60 508 aa25.46■■□□□ 1.67
CCDC78-215ENST00000538176 A0A0D9SFI3 127 aa25.45■■□□□ 1.66
CCDC78-215ENST00000538176 TSPY2A6NKD2 308 aa25.45■■□□□ 1.66
CCDC78-215ENST00000538176 FOXP2O15409 715 aa25.45■■□□□ 1.66
CCDC78-215ENST00000538176 NDUFB10O96000 172 aa25.45■■□□□ 1.66
CCDC78-215ENST00000538176 FGAP02671 866 aa25.45■■□□□ 1.66
CCDC78-215ENST00000538176 FGRP09769 529 aa25.45■■□□□ 1.66
CCDC78-215ENST00000538176 HSPD1P10809 573 aaKnown RBP25.45■■□□□ 1.66
CCDC78-215ENST00000538176 PCP11498 1178 aaKnown RBP25.45■■□□□ 1.66
CCDC78-215ENST00000538176 NMIQ13287 307 aaPredicted RBP25.45■■□□□ 1.66
CCDC78-215ENST00000538176 NCAPG2Q86XI2 1143 aa25.45■■□□□ 1.66
CCDC78-215ENST00000538176 SLF1Q9BQI6 1058 aa25.45■■□□□ 1.66
CCDC78-215ENST00000538176 DDX52Q9Y2R4 599 aaKnown RBP eCLIP25.45■■□□□ 1.66
CCDC78-215ENST00000538176 MKI67P46013 3256 aaKnown RBP25.45■■□□□ 1.66
CCDC78-215ENST00000538176 CCDC171Q6TFL3 1326 aa25.44■■□□□ 1.66
CCDC78-215ENST00000538176 ORC4O43929 436 aa25.44■■□□□ 1.66
CCDC78-215ENST00000538176 FDX1P10109 184 aa25.44■■□□□ 1.66
CCDC78-215ENST00000538176 FCER1AP12319 257 aa25.44■■□□□ 1.66
CCDC78-215ENST00000538176 STAT3P40763 770 aa25.44■■□□□ 1.66
CCDC78-215ENST00000538176 NT5C2P49902 561 aa25.44■■□□□ 1.66
CCDC78-215ENST00000538176 CACNB2Q08289 660 aaPredicted RBP25.44■■□□□ 1.66
CCDC78-215ENST00000538176 TMEM132BQ14DG7 1078 aa25.44■■□□□ 1.66
CCDC78-215ENST00000538176 VPS53Q5VIR6 699 aa25.44■■□□□ 1.66
CCDC78-215ENST00000538176 RIOX2Q8IUF8 465 aa25.44■■□□□ 1.66
CCDC78-215ENST00000538176 FEM1BQ9UK73 627 aa25.44■■□□□ 1.66
CCDC78-215ENST00000538176 A0A0G2JMZ2 1700 aa25.43■■□□□ 1.66
CCDC78-215ENST00000538176 ADORA2AP29274 412 aa25.43■■□□□ 1.66
CCDC78-215ENST00000538176 TRIM32Q13049 653 aa25.43■■□□□ 1.66
CCDC78-215ENST00000538176 FAM47AQ5JRC9 791 aa25.43■■□□□ 1.66
CCDC78-215ENST00000538176 SAMD1Q6SPF0 538 aaPredicted RBP25.43■■□□□ 1.66
CCDC78-215ENST00000538176 FBXO28Q9NVF7 368 aa25.43■■□□□ 1.66
CCDC78-215ENST00000538176 MSCO60682 206 aa25.42■■□□□ 1.66
CCDC78-215ENST00000538176 CTDSPL2Q05D32 466 aa25.42■■□□□ 1.66
CCDC78-215ENST00000538176 CCL14Q16627 93 aa25.42■■□□□ 1.66
CCDC78-215ENST00000538176 OLFML2BQ68BL8 750 aa25.42■■□□□ 1.66
CCDC78-215ENST00000538176 NECAB2Q7Z6G3 386 aa25.42■■□□□ 1.66
CCDC78-215ENST00000538176 DPF3Q92784 378 aa25.42■■□□□ 1.66
CCDC78-215ENST00000538176 DIAPH3Q9NSV4 1193 aa25.42■■□□□ 1.66
CCDC78-215ENST00000538176 OGDHLQ9ULD0 1010 aa25.42■■□□□ 1.66
CCDC78-215ENST00000538176 CTDP1Q9Y5B0 961 aaPredicted RBP25.42■■□□□ 1.66
CCDC78-215ENST00000538176 ATP2A1O14983 1001 aa25.41■■□□□ 1.66
CCDC78-215ENST00000538176 RANBP6O60518 1105 aaKnown RBP25.41■■□□□ 1.66
CCDC78-215ENST00000538176 ZBED4O75132 1171 aa25.41■■□□□ 1.66
CCDC78-215ENST00000538176 MYH4Q9Y623 1939 aa25.41■■□□□ 1.66
CCDC78-215ENST00000538176 PARP14Q460N5 1801 aa25.4■■□□□ 1.66
CCDC78-215ENST00000538176 BMP3P12645 472 aa25.4■■□□□ 1.66
CCDC78-215ENST00000538176 SLFN13Q68D06 897 aa25.4■■□□□ 1.66
CCDC78-215ENST00000538176 CHURC1Q8WUH1 139 aa25.4■■□□□ 1.66
CCDC78-215ENST00000538176 TEX13BQ9BXU2 312 aa25.4■■□□□ 1.66
CCDC78-215ENST00000538176 RNF41Q9H4P4 317 aaPredicted RBP25.4■■□□□ 1.66
CCDC78-215ENST00000538176 ZNF214Q9UL59 606 aaPredicted RBP25.4■■□□□ 1.66
CCDC78-215ENST00000538176 STX8Q9UNK0 236 aa25.4■■□□□ 1.66
CCDC78-215ENST00000538176 NR2E3Q9Y5X4 410 aa25.4■■□□□ 1.66
CCDC78-215ENST00000538176 OAZ1P54368 228 aa25.39■■□□□ 1.66
CCDC78-215ENST00000538176 KCTD2Q14681 263 aa25.39■■□□□ 1.66
CCDC78-215ENST00000538176 ZNF589Q86UQ0 364 aaPredicted RBP25.39■■□□□ 1.66
CCDC78-215ENST00000538176 REPS2Q8NFH8 660 aa25.39■■□□□ 1.66
CCDC78-215ENST00000538176 NPLOC4Q8TAT6 608 aa25.39■■□□□ 1.66
CCDC78-215ENST00000538176 GMCL1Q96IK5 515 aa25.39■■□□□ 1.66
CCDC78-215ENST00000538176 NUP88Q99567 741 aaPredicted RBP25.39■■□□□ 1.66
CCDC78-215ENST00000538176 TCP11L1Q9NUJ3 509 aa25.39■■□□□ 1.66
CCDC78-215ENST00000538176 DIS3Q9Y2L1 958 aaKnown RBP25.39■■□□□ 1.66
CCDC78-215ENST00000538176 ZNF236Q9UL36 1845 aa25.39■■□□□ 1.65
CCDC78-215ENST00000538176 PLA2G6O60733 806 aa25.38■■□□□ 1.65
CCDC78-215ENST00000538176 NOVP48745 357 aa25.38■■□□□ 1.65
CCDC78-215ENST00000538176 CWC27Q6UX04 472 aaKnown RBP25.38■■□□□ 1.65
CCDC78-215ENST00000538176 MFSD6Q6ZSS7 791 aa25.38■■□□□ 1.65
CCDC78-215ENST00000538176 FAM160B2Q86V87 743 aa25.38■■□□□ 1.65
CCDC78-215ENST00000538176 MMP19Q99542 508 aa25.38■■□□□ 1.65
CCDC78-215ENST00000538176 NBPF3Q9H094 633 aa25.38■■□□□ 1.65
CCDC78-215ENST00000538176 TOMM22Q9NS69 142 aa25.38■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms