RNA–Protein interactions for RNA: ENST00000538144.5

PXN-208, Transcript of paxillin, humanhuman

TSL 1 (best)

Gene PXN, Length 1,805 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PXN-208ENST00000538144 VPS54Q9P1Q0 977 aa17.47■□□□□ 0.39
PXN-208ENST00000538144 KIF28PB7ZC32 967 aa17.47■□□□□ 0.39
PXN-208ENST00000538144 F5H6K3 240 aa17.47■□□□□ 0.39
PXN-208ENST00000538144 SCG2P13521 617 aa17.47■□□□□ 0.39
PXN-208ENST00000538144 EPHX2P34913 555 aa17.47■□□□□ 0.39
PXN-208ENST00000538144 ECE1P42892 770 aa17.47■□□□□ 0.39
PXN-208ENST00000538144 ZNF445P59923 1031 aa17.47■□□□□ 0.39
PXN-208ENST00000538144 KIF23Q02241 960 aaPredicted RBP17.47■□□□□ 0.39
PXN-208ENST00000538144 KLRC3Q07444 240 aa17.47■□□□□ 0.39
PXN-208ENST00000538144 ZNF543Q08ER8 600 aa17.47■□□□□ 0.39
PXN-208ENST00000538144 DCAF15Q66K64 600 aa17.47■□□□□ 0.39
PXN-208ENST00000538144 SLFN13Q68D06 897 aa17.47■□□□□ 0.39
PXN-208ENST00000538144 KCTD1Q719H9 257 aa17.47■□□□□ 0.39
PXN-208ENST00000538144 GAS2L3Q86XJ1 694 aa17.47■□□□□ 0.39
PXN-208ENST00000538144 SHISA4Q96DD7 197 aa17.47■□□□□ 0.39
PXN-208ENST00000538144 TFIP11Q9UBB9 837 aaKnown RBP17.47■□□□□ 0.39
PXN-208ENST00000538144 FZD1Q9UP38 647 aa17.47■□□□□ 0.39
PXN-208ENST00000538144 PPP2R3BQ9Y5P8 575 aa17.47■□□□□ 0.39
PXN-208ENST00000538144 PITPNM2Q9BZ72 1349 aa17.47■□□□□ 0.39
PXN-208ENST00000538144 MMP1P03956 469 aa17.46■□□□□ 0.39
PXN-208ENST00000538144 ASNSP08243 561 aa17.46■□□□□ 0.39
PXN-208ENST00000538144 XBP1P17861 261 aa17.46■□□□□ 0.39
PXN-208ENST00000538144 PFKFB3Q16875 520 aaPredicted RBP17.46■□□□□ 0.39
PXN-208ENST00000538144 TTBK2Q6IQ55 1244 aa17.46■□□□□ 0.39
PXN-208ENST00000538144 DLK2Q6UY11 383 aa17.46■□□□□ 0.39
PXN-208ENST00000538144 CCDC84Q86UT8 332 aaPredicted RBP17.46■□□□□ 0.39
PXN-208ENST00000538144 ACER1Q8TDN7 264 aa17.46■□□□□ 0.39
PXN-208ENST00000538144 SPZ1Q9BXG8 430 aa17.46■□□□□ 0.39
PXN-208ENST00000538144 ARHGEF10LQ9HCE6 1279 aa17.46■□□□□ 0.39
PXN-208ENST00000538144 RBM27Q9P2N5 1060 aaKnown RBP17.46■□□□□ 0.39
PXN-208ENST00000538144 FIBPO43427 364 aa17.45■□□□□ 0.38
PXN-208ENST00000538144 SLC1A4P43007 532 aa17.45■□□□□ 0.38
PXN-208ENST00000538144 GNL2Q13823 731 aaKnown RBP17.45■□□□□ 0.38
PXN-208ENST00000538144 USP50Q70EL3 339 aaPredicted RBP17.45■□□□□ 0.38
PXN-208ENST00000538144 GPT2Q8TD30 523 aa17.45■□□□□ 0.38
PXN-208ENST00000538144 HOOK2Q96ED9 719 aa17.45■□□□□ 0.38
PXN-208ENST00000538144 ZNF341Q9BYN7 854 aa17.45■□□□□ 0.38
PXN-208ENST00000538144 GRPEL1Q9HAV7 217 aa17.45■□□□□ 0.38
PXN-208ENST00000538144 SCN4AP35499 1836 aa17.45■□□□□ 0.38
PXN-208ENST00000538144 SMARCA1P28370 1054 aa17.44■□□□□ 0.38
PXN-208ENST00000538144 INPP5BP32019 993 aa17.44■□□□□ 0.38
PXN-208ENST00000538144 KRT85P78386 507 aa17.44■□□□□ 0.38
PXN-208ENST00000538144 GPATCH4Q5T3I0 446 aaKnown RBP17.44■□□□□ 0.38
PXN-208ENST00000538144 USP48Q86UV5 1035 aa17.44■□□□□ 0.38
PXN-208ENST00000538144 HOMER1Q86YM7 354 aa17.44■□□□□ 0.38
PXN-208ENST00000538144 SULF1Q8IWU6 871 aa17.44■□□□□ 0.38
PXN-208ENST00000538144 TMEM87AQ8NBN3 555 aa17.44■□□□□ 0.38
PXN-208ENST00000538144 GMCL1P1Q8NEA9 526 aa17.44■□□□□ 0.38
PXN-208ENST00000538144 DCAF4Q8WV16 495 aa17.44■□□□□ 0.38
PXN-208ENST00000538144 RIOX1Q9H6W3 641 aa17.44■□□□□ 0.38
PXN-208ENST00000538144 BTBD18B2RXH4 712 aa17.44■□□□□ 0.38
PXN-208ENST00000538144 ADM5C9JUS6 153 aa17.44■□□□□ 0.38
PXN-208ENST00000538144 CTNND1O60716 968 aaKnown RBP17.44■□□□□ 0.38
PXN-208ENST00000538144 NDUFB10O96000 172 aa17.44■□□□□ 0.38
PXN-208ENST00000538144 SLC16A2P36021 539 aa17.44■□□□□ 0.38
PXN-208ENST00000538144 SAFBQ15424 915 aaKnown RBP eCLIP17.44■□□□□ 0.38
PXN-208ENST00000538144 GPKOWQ92917 476 aaPredicted RBP eCLIP17.44■□□□□ 0.38
PXN-208ENST00000538144 RRP36Q96EU6 259 aaKnown RBP17.44■□□□□ 0.38
PXN-208ENST00000538144 PIGSQ96S52 555 aa17.44■□□□□ 0.38
PXN-208ENST00000538144 NUP88Q99567 741 aaPredicted RBP17.44■□□□□ 0.38
PXN-208ENST00000538144 GLIS2Q9BZE0 524 aaPredicted RBP17.44■□□□□ 0.38
PXN-208ENST00000538144 TMX2Q9Y320 296 aa17.44■□□□□ 0.38
PXN-208ENST00000538144 SUPT20HL1Q3ZLR7 823 aa17.43■□□□□ 0.38
PXN-208ENST00000538144 EAPPQ56P03 285 aaPredicted RBP17.43■□□□□ 0.38
PXN-208ENST00000538144 BRAPQ7Z569 592 aa17.43■□□□□ 0.38
PXN-208ENST00000538144 DIS3L2Q8IYB7 885 aaKnown RBP17.43■□□□□ 0.38
PXN-208ENST00000538144 SPICE1Q8N0Z3 855 aa17.43■□□□□ 0.38
PXN-208ENST00000538144 PHF20Q9BVI0 1012 aa17.43■□□□□ 0.38
PXN-208ENST00000538144 POTECB2RU33 542 aa17.42■□□□□ 0.38
PXN-208ENST00000538144 U2AF2P26368 475 aaKnown RBP eCLIP17.42■□□□□ 0.38
PXN-208ENST00000538144 CEBPZQ03701 1054 aaKnown RBP17.42■□□□□ 0.38
PXN-208ENST00000538144 PRKG1Q13976 671 aa17.42■□□□□ 0.38
PXN-208ENST00000538144 ZYXQ15942 572 aaKnown RBP17.42■□□□□ 0.38
PXN-208ENST00000538144 HEATR3Q7Z4Q2 680 aa17.42■□□□□ 0.38
PXN-208ENST00000538144 ADGRF4Q8IZF3 695 aa17.42■□□□□ 0.38
PXN-208ENST00000538144 OXER1Q8TDS5 423 aa17.42■□□□□ 0.38
PXN-208ENST00000538144 WRNIP1Q96S55 665 aa17.42■□□□□ 0.38
PXN-208ENST00000538144 TAF1DQ9H5J8 278 aaPredicted RBP17.42■□□□□ 0.38
PXN-208ENST00000538144 SEC63Q9UGP8 760 aaKnown RBP17.42■□□□□ 0.38
PXN-208ENST00000538144 ZNF112Q9UJU3 913 aa17.42■□□□□ 0.38
PXN-208ENST00000538144 DOCK1Q14185 1865 aa17.42■□□□□ 0.38
PXN-208ENST00000538144 SSC5DA1L4H1 1573 aa17.42■□□□□ 0.38
PXN-208ENST00000538144 IQCA1LA6NCM1 817 aa17.42■□□□□ 0.38
PXN-208ENST00000538144 MBD3O95983 291 aa17.42■□□□□ 0.38
PXN-208ENST00000538144 KIAA1755Q5JYT7 1200 aa17.42■□□□□ 0.38
PXN-208ENST00000538144 WWC2Q6AWC2 1192 aa17.42■□□□□ 0.38
PXN-208ENST00000538144 KRT26Q7Z3Y9 468 aa17.42■□□□□ 0.38
PXN-208ENST00000538144 ZKSCAN4Q969J2 545 aaPredicted RBP17.42■□□□□ 0.38
PXN-208ENST00000538144 GMCL1Q96IK5 515 aa17.42■□□□□ 0.38
PXN-208ENST00000538144 ZNF396Q96N95 335 aaPredicted RBP17.42■□□□□ 0.38
PXN-208ENST00000538144 FTOQ9C0B1 505 aaKnown RBP eCLIP17.42■□□□□ 0.38
PXN-208ENST00000538144 GOPCQ9HD26 462 aa17.42■□□□□ 0.38
PXN-208ENST00000538144 SYNPO2Q9UMS6 1093 aa17.42■□□□□ 0.38
PXN-208ENST00000538144 NLRP5P59047 1200 aa17.41■□□□□ 0.38
PXN-208ENST00000538144 NR5A1Q13285 461 aa17.41■□□□□ 0.38
PXN-208ENST00000538144 TPRNQ4KMQ1 711 aa17.41■□□□□ 0.38
PXN-208ENST00000538144 MYSM1Q5VVJ2 828 aa17.41■□□□□ 0.38
PXN-208ENST00000538144 JMJD4Q9H9V9 463 aa17.41■□□□□ 0.38
PXN-208ENST00000538144 CFAP45Q9UL16 551 aa17.41■□□□□ 0.38
PXN-208ENST00000538144 USP17L10C9JJH3 530 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms