RNA–Protein interactions for RNA: ENST00000537971.5

TSPAN9-206, Transcript of tetraspanin 9, humanhuman

APPRIS P1 TSL 3 BASIC

Gene TSPAN9, Length 4,284 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-206ENST00000537971 PTPRAP18433 802 aa14.02□□□□□ -0.16
TSPAN9-206ENST00000537971 AKNAD1Q5T1N1 836 aa14.02□□□□□ -0.16
TSPAN9-206ENST00000537971 PUS7LQ9H0K6 701 aaKnown RBP14.02□□□□□ -0.16
TSPAN9-206ENST00000537971 NUP62CLQ9H1M0 184 aa14.02□□□□□ -0.16
TSPAN9-206ENST00000537971 EHD4Q9H223 541 aa14.02□□□□□ -0.16
TSPAN9-206ENST00000537971 RPAP3Q9H6T3 665 aaPredicted RBP14.02□□□□□ -0.16
TSPAN9-206ENST00000537971 SAGE1Q9NXZ1 904 aa14.02□□□□□ -0.16
TSPAN9-206ENST00000537971 TMEM232C9JQI7 657 aa14.02□□□□□ -0.16
TSPAN9-206ENST00000537971 TOP1P11387 765 aaKnown RBP14.02□□□□□ -0.16
TSPAN9-206ENST00000537971 MAPK4P31152 587 aa14.02□□□□□ -0.16
TSPAN9-206ENST00000537971 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.02□□□□□ -0.168e-7■□□□□ 9.5
TSPAN9-206ENST00000537971 PRDM10Q9NQV6 1147 aa14.02□□□□□ -0.16
TSPAN9-206ENST00000537971 HOMER2Q9NSB8 354 aa14.02□□□□□ -0.16
TSPAN9-206ENST00000537971 BAG4O95429 457 aaKnown RBP14.02□□□□□ -0.17
TSPAN9-206ENST00000537971 TPM2P07951 284 aa14.02□□□□□ -0.17
TSPAN9-206ENST00000537971 MCM5P33992 734 aa14.02□□□□□ -0.17
TSPAN9-206ENST00000537971 CTDSPL2Q05D32 466 aa14.02□□□□□ -0.17
TSPAN9-206ENST00000537971 ZNF396Q96N95 335 aaPredicted RBP14.02□□□□□ -0.17
TSPAN9-206ENST00000537971 TFRCP02786 760 aaKnown RBP14.01□□□□□ -0.17
TSPAN9-206ENST00000537971 CKAP2LQ8IYA6 745 aa14.01□□□□□ -0.17
TSPAN9-206ENST00000537971 LRRC47Q8N1G4 583 aaKnown RBP14.01□□□□□ -0.17
TSPAN9-206ENST00000537971 ALAS1P13196 640 aa14.01□□□□□ -0.17
TSPAN9-206ENST00000537971 RGS2P41220 211 aa14.01□□□□□ -0.17
TSPAN9-206ENST00000537971 CCDC43Q96MW1 224 aaKnown RBP14.01□□□□□ -0.17
TSPAN9-206ENST00000537971 STAP2Q9UGK3 403 aa14.01□□□□□ -0.17
TSPAN9-206ENST00000537971 AGTPBP1Q9UPW5 1226 aa14.01□□□□□ -0.17
TSPAN9-206ENST00000537971 PTPDC1A2A3K4 754 aa14.01□□□□□ -0.17
TSPAN9-206ENST00000537971 WDR46O15213 610 aaKnown RBP14.01□□□□□ -0.17
TSPAN9-206ENST00000537971 GNRH1P01148 92 aa14.01□□□□□ -0.17
TSPAN9-206ENST00000537971 CYP2B6P20813 491 aa14.01□□□□□ -0.17
TSPAN9-206ENST00000537971 CCDC84Q86UT8 332 aaPredicted RBP14.01□□□□□ -0.17
TSPAN9-206ENST00000537971 NKX2-3Q8TAU0 364 aa14.01□□□□□ -0.17
TSPAN9-206ENST00000537971 PASKQ96RG2 1323 aa14.01□□□□□ -0.17
TSPAN9-206ENST00000537971 CALM1P0DP23 149 aa14□□□□□ -0.17
TSPAN9-206ENST00000537971 CALM2P0DP24 149 aa14□□□□□ -0.17
TSPAN9-206ENST00000537971 CALM3P0DP25 149 aa14□□□□□ -0.17
TSPAN9-206ENST00000537971 FCER1AP12319 257 aa14□□□□□ -0.17
TSPAN9-206ENST00000537971 TRMT44Q8IYL2 757 aaKnown RBP14□□□□□ -0.17
TSPAN9-206ENST00000537971 OSBP2Q969R2 916 aa14□□□□□ -0.17
TSPAN9-206ENST00000537971 CCDC47Q96A33 483 aaKnown RBP14□□□□□ -0.17
TSPAN9-206ENST00000537971 CEP89Q96ST8 783 aa14□□□□□ -0.17
TSPAN9-206ENST00000537971 USP25Q9UHP3 1055 aa14□□□□□ -0.17
TSPAN9-206ENST00000537971 SERPINC1P01008 464 aa14□□□□□ -0.17
TSPAN9-206ENST00000537971 CYP2D6P10635 497 aa14□□□□□ -0.17
TSPAN9-206ENST00000537971 NAP1L1P55209 391 aaKnown RBP14□□□□□ -0.17
TSPAN9-206ENST00000537971 C12orf60Q5U649 245 aa14□□□□□ -0.17
TSPAN9-206ENST00000537971 CCDC174Q6PII3 467 aa14□□□□□ -0.17
TSPAN9-206ENST00000537971 PPP1R3FQ6ZSY5 799 aaPredicted RBP14□□□□□ -0.17
TSPAN9-206ENST00000537971 CD99L2Q8TCZ2 262 aa14□□□□□ -0.17
TSPAN9-206ENST00000537971 ZSCAN31Q96LW9 406 aaPredicted RBP14□□□□□ -0.17
TSPAN9-206ENST00000537971 SLF1Q9BQI6 1058 aa14□□□□□ -0.17
TSPAN9-206ENST00000537971 CCT2P78371 535 aaKnown RBP14□□□□□ -0.17
TSPAN9-206ENST00000537971 LDLRAD1Q5T700 205 aa14□□□□□ -0.17
TSPAN9-206ENST00000537971 FAM227BQ96M60 508 aa14□□□□□ -0.17
TSPAN9-206ENST00000537971 ADD3Q9UEY8 706 aaKnown RBP14□□□□□ -0.17
TSPAN9-206ENST00000537971 POTEB2H3BUK9 544 aa13.99□□□□□ -0.17
TSPAN9-206ENST00000537971 BCORQ6W2J9 1755 aa13.99□□□□□ -0.17
TSPAN9-206ENST00000537971 ZSCAN30Q86W11 494 aa13.99□□□□□ -0.17
TSPAN9-206ENST00000537971 STAT2P52630 851 aa13.99□□□□□ -0.17
TSPAN9-206ENST00000537971 RAB11FIP4Q86YS3 637 aa13.99□□□□□ -0.17
TSPAN9-206ENST00000537971 DSCC1Q9BVC3 393 aa13.99□□□□□ -0.17
TSPAN9-206ENST00000537971 ZCCHC17Q9NP64 241 aaKnown RBP13.99□□□□□ -0.17
TSPAN9-206ENST00000537971 NOD1Q9Y239 953 aa13.99□□□□□ -0.17
TSPAN9-206ENST00000537971 NR2E3Q9Y5X4 410 aa13.99□□□□□ -0.17
TSPAN9-206ENST00000537971 MYPNQ86TC9 1320 aa13.99□□□□□ -0.17
TSPAN9-206ENST00000537971 CYP2D7A0A087X1C5 515 aa13.99□□□□□ -0.17
TSPAN9-206ENST00000537971 FOXN1O15353 648 aa13.99□□□□□ -0.17
TSPAN9-206ENST00000537971 CCDC12Q8WUD4 166 aaPredicted RBP13.99□□□□□ -0.17
TSPAN9-206ENST00000537971 DDX4Q9NQI0 724 aaKnown RBP13.99□□□□□ -0.17
TSPAN9-206ENST00000537971 WBP1LQ9NX94 342 aa13.99□□□□□ -0.17
TSPAN9-206ENST00000537971 SLC25A27O95847 323 aa13.98□□□□□ -0.17
TSPAN9-206ENST00000537971 EEF2P13639 858 aaKnown RBP13.98□□□□□ -0.17
TSPAN9-206ENST00000537971 PLEKHH3Q7Z736 793 aa13.98□□□□□ -0.17
TSPAN9-206ENST00000537971 PRPF38AQ8NAV1 312 aaKnown RBP13.98□□□□□ -0.17
TSPAN9-206ENST00000537971 FEM1BQ9UK73 627 aa13.98□□□□□ -0.17
TSPAN9-206ENST00000537971 LIMCH1Q9UPQ0 1083 aa13.98□□□□□ -0.17
TSPAN9-206ENST00000537971 BTBD19C9JJ37 291 aa13.98□□□□□ -0.17
TSPAN9-206ENST00000537971 SEC62Q99442 399 aaKnown RBP13.98□□□□□ -0.17
TSPAN9-206ENST00000537971 AP5M1Q9H0R1 490 aa13.98□□□□□ -0.17
TSPAN9-206ENST00000537971 CCPG1Q9ULG6 757 aa13.98□□□□□ -0.17
TSPAN9-206ENST00000537971 RABGAP1Q9Y3P9 1069 aa13.98□□□□□ -0.17
TSPAN9-206ENST00000537971 DTNBO60941 627 aa13.98□□□□□ -0.17
TSPAN9-206ENST00000537971 STAT3P40763 770 aa13.98□□□□□ -0.17
TSPAN9-206ENST00000537971 GPATCH4Q5T3I0 446 aaKnown RBP13.98□□□□□ -0.17
TSPAN9-206ENST00000537971 NECAB1Q8N987 351 aa13.98□□□□□ -0.17
TSPAN9-206ENST00000537971 SLC44A5Q8NCS7 719 aa13.98□□□□□ -0.17
TSPAN9-206ENST00000537971 RNF208Q9H0X6 261 aa13.98□□□□□ -0.17
TSPAN9-206ENST00000537971 ZEB2O60315 1214 aa13.98□□□□□ -0.17
TSPAN9-206ENST00000537971 CDKL5O76039 1030 aa13.98□□□□□ -0.17
TSPAN9-206ENST00000537971 RBM25P49756 843 aaKnown RBP13.98□□□□□ -0.17
TSPAN9-206ENST00000537971 RHBDL3P58872 404 aa13.98□□□□□ -0.17
TSPAN9-206ENST00000537971 SMARCC2Q8TAQ2 1214 aa13.98□□□□□ -0.17
TSPAN9-206ENST00000537971 SOCS4Q8WXH5 440 aa13.98□□□□□ -0.17
TSPAN9-206ENST00000537971 VCPKMTQ9H867 229 aa13.98□□□□□ -0.17
TSPAN9-206ENST00000537971 SBK1Q52WX2 424 aa13.97□□□□□ -0.17
TSPAN9-206ENST00000537971 ZFPM1Q8IX07 1006 aa13.97□□□□□ -0.17
TSPAN9-206ENST00000537971 DPF3Q92784 378 aa13.97□□□□□ -0.17
TSPAN9-206ENST00000537971 RRP36Q96EU6 259 aaKnown RBP13.97□□□□□ -0.17
TSPAN9-206ENST00000537971 TMX3Q96JJ7 454 aa13.97□□□□□ -0.17
TSPAN9-206ENST00000537971 UQCRHLA0A096LP55 91 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms