RNA–Protein interactions for RNA: ENST00000537842.5

TNFRSF1A-210, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 404 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-210ENST00000537842 CTSBP07858 339 aa3.39□□□□□ -1.87
TNFRSF1A-210ENST00000537842 XRCC5P13010 732 aaKnown RBP3.39□□□□□ -1.87
TNFRSF1A-210ENST00000537842 DRD2P14416 443 aa3.39□□□□□ -1.87
TNFRSF1A-210ENST00000537842 IL2RBP14784 551 aa3.39□□□□□ -1.87
TNFRSF1A-210ENST00000537842 LIG1P18858 919 aa3.39□□□□□ -1.87
TNFRSF1A-210ENST00000537842 PPP2R1AP30153 589 aa3.39□□□□□ -1.87
TNFRSF1A-210ENST00000537842 PREPP48147 710 aa3.39□□□□□ -1.87
TNFRSF1A-210ENST00000537842 DAB2P98082 770 aa3.39□□□□□ -1.87
TNFRSF1A-210ENST00000537842 HDLBPQ00341 1268 aaKnown RBP3.39□□□□□ -1.87
TNFRSF1A-210ENST00000537842 GNL2Q13823 731 aaKnown RBP3.39□□□□□ -1.87
TNFRSF1A-210ENST00000537842 DDB1Q16531 1140 aa3.39□□□□□ -1.87
TNFRSF1A-210ENST00000537842 LDLRAD1Q5T700 205 aa3.39□□□□□ -1.87
TNFRSF1A-210ENST00000537842 PCNX4Q63HM2 1172 aa3.39□□□□□ -1.87
TNFRSF1A-210ENST00000537842 FAM196AQ6ZSG2 479 aa3.39□□□□□ -1.87
TNFRSF1A-210ENST00000537842 KIAA1211Q6ZU35 1233 aa3.39□□□□□ -1.87
TNFRSF1A-210ENST00000537842 SMIM5Q71RC9 77 aa3.39□□□□□ -1.87
TNFRSF1A-210ENST00000537842 ALYREFQ86V81 257 aaKnown RBP3.39□□□□□ -1.87
TNFRSF1A-210ENST00000537842 AMIGO3Q86WK7 504 aa3.39□□□□□ -1.87
TNFRSF1A-210ENST00000537842 WNT8BQ93098 351 aa3.39□□□□□ -1.87
TNFRSF1A-210ENST00000537842 LENG1Q96BZ8 264 aaPredicted RBP3.39□□□□□ -1.87
TNFRSF1A-210ENST00000537842 CRELD1Q96HD1 420 aa3.39□□□□□ -1.87
TNFRSF1A-210ENST00000537842 MEGF10Q96KG7 1140 aa3.39□□□□□ -1.87
TNFRSF1A-210ENST00000537842 PHACTR3Q96KR7 559 aa3.39□□□□□ -1.87
TNFRSF1A-210ENST00000537842 CEP44Q9C0F1 390 aa3.39□□□□□ -1.87
TNFRSF1A-210ENST00000537842 SRCIN1Q9C0H9 1055 aa3.39□□□□□ -1.87
TNFRSF1A-210ENST00000537842 RNF208Q9H0X6 261 aa3.39□□□□□ -1.87
TNFRSF1A-210ENST00000537842 LGR6Q9HBX8 967 aa3.39□□□□□ -1.87
TNFRSF1A-210ENST00000537842 OSGEPQ9NPF4 335 aa3.39□□□□□ -1.87
TNFRSF1A-210ENST00000537842 CSADQ9Y600 493 aa3.39□□□□□ -1.87
TNFRSF1A-210ENST00000537842 AK5Q9Y6K8 562 aa3.39□□□□□ -1.87
TNFRSF1A-210ENST00000537842 THSD7AQ9UPZ6 1657 aa3.39□□□□□ -1.87
TNFRSF1A-210ENST00000537842 NWD2Q9ULI1 1742 aa3.39□□□□□ -1.87
TNFRSF1A-210ENST00000537842 NSD2O96028 1365 aa3.38□□□□□ -1.87
TNFRSF1A-210ENST00000537842 FLT4P35916 1363 aa3.38□□□□□ -1.87
TNFRSF1A-210ENST00000537842 NPC1L1Q9UHC9 1359 aa3.38□□□□□ -1.87
TNFRSF1A-210ENST00000537842 GIPC1O14908 333 aa3.38□□□□□ -1.87
TNFRSF1A-210ENST00000537842 DLGAP3O95886 979 aa3.38□□□□□ -1.87
TNFRSF1A-210ENST00000537842 GSTP1P09211 210 aaKnown RBP3.38□□□□□ -1.87
TNFRSF1A-210ENST00000537842 HMOX1P09601 288 aa3.38□□□□□ -1.87
TNFRSF1A-210ENST00000537842 FURINP09958 794 aa3.38□□□□□ -1.87
TNFRSF1A-210ENST00000537842 IBSPP21815 317 aaPredicted RBP3.38□□□□□ -1.87
TNFRSF1A-210ENST00000537842 ERCC5P28715 1186 aaPredicted RBP3.38□□□□□ -1.87
TNFRSF1A-210ENST00000537842 AP3B2Q13367 1082 aa3.38□□□□□ -1.87
TNFRSF1A-210ENST00000537842 SEPT6Q14141 434 aa3.38□□□□□ -1.87
TNFRSF1A-210ENST00000537842 ADGRE1Q14246 886 aa3.38□□□□□ -1.87
TNFRSF1A-210ENST00000537842 NAALADL2Q58DX5 795 aa3.38□□□□□ -1.87
TNFRSF1A-210ENST00000537842 SULT6B1Q6IMI4 303 aa3.38□□□□□ -1.87
TNFRSF1A-210ENST00000537842 TTBK2Q6IQ55 1244 aa3.38□□□□□ -1.87
TNFRSF1A-210ENST00000537842 DYMQ7RTS9 669 aa3.38□□□□□ -1.87
TNFRSF1A-210ENST00000537842 TMEM87AQ8NBN3 555 aa3.38□□□□□ -1.87
TNFRSF1A-210ENST00000537842 ZCRB1Q8TBF4 217 aaKnown RBP3.38□□□□□ -1.87
TNFRSF1A-210ENST00000537842 GRIN3AQ8TCU5 1115 aa3.38□□□□□ -1.87
TNFRSF1A-210ENST00000537842 STK35Q8TDR2 534 aa3.38□□□□□ -1.87
TNFRSF1A-210ENST00000537842 PIGBQ92521 554 aa3.38□□□□□ -1.87
TNFRSF1A-210ENST00000537842 CEP41Q9BYV8 373 aa3.38□□□□□ -1.87
TNFRSF1A-210ENST00000537842 CCDC86Q9H6F5 360 aaKnown RBP3.38□□□□□ -1.87
TNFRSF1A-210ENST00000537842 TPSG1Q9NRR2 321 aa3.38□□□□□ -1.87
TNFRSF1A-210ENST00000537842 PPM1HQ9ULR3 514 aa3.38□□□□□ -1.87
TNFRSF1A-210ENST00000537842 USP54Q70EL1 1684 aa3.38□□□□□ -1.87
TNFRSF1A-210ENST00000537842 TNKS1BP1Q9C0C2 1729 aaKnown RBP3.38□□□□□ -1.87
TNFRSF1A-210ENST00000537842 IGSF1Q8N6C5 1336 aa3.38□□□□□ -1.87
TNFRSF1A-210ENST00000537842 OVOS2A0A0G2JMS6 1433 aa3.37□□□□□ -1.87
TNFRSF1A-210ENST00000537842 BCL9O00512 1426 aa3.37□□□□□ -1.87
TNFRSF1A-210ENST00000537842 BLMP54132 1417 aaPredicted RBP3.37□□□□□ -1.87
TNFRSF1A-210ENST00000537842 SMG6Q86US8 1419 aaKnown RBP3.37□□□□□ -1.87
TNFRSF1A-210ENST00000537842 COL3A1P02461 1466 aaPredicted RBP3.37□□□□□ -1.87
TNFRSF1A-210ENST00000537842 PRAMEF27A3QJZ7 478 aa3.37□□□□□ -1.87
TNFRSF1A-210ENST00000537842 PLSCR1O15162 318 aa3.37□□□□□ -1.87
TNFRSF1A-210ENST00000537842 PROCP04070 461 aa3.37□□□□□ -1.87
TNFRSF1A-210ENST00000537842 ITGB2P05107 769 aa3.37□□□□□ -1.87
TNFRSF1A-210ENST00000537842 CTSHP09668 335 aa3.37□□□□□ -1.87
TNFRSF1A-210ENST00000537842 ADH5P11766 374 aa3.37□□□□□ -1.87
TNFRSF1A-210ENST00000537842 USP11P51784 963 aa3.37□□□□□ -1.87
TNFRSF1A-210ENST00000537842 HNRNPUQ00839 825 aaKnown RBP eCLIP3.37□□□□□ -1.87
TNFRSF1A-210ENST00000537842 PTPN12Q05209 780 aaKnown RBP3.37□□□□□ -1.87
TNFRSF1A-210ENST00000537842 FAM160A1Q05DH4 1040 aa3.37□□□□□ -1.87
TNFRSF1A-210ENST00000537842 MTHFSDQ2M296 383 aaKnown RBP3.37□□□□□ -1.87
TNFRSF1A-210ENST00000537842 HP1BP3Q5SSJ5 553 aaPredicted RBP3.37□□□□□ -1.87
TNFRSF1A-210ENST00000537842 SOGA3Q5TF21 947 aa3.37□□□□□ -1.87
TNFRSF1A-210ENST00000537842 LLGL2Q6P1M3 1020 aa3.37□□□□□ -1.87
TNFRSF1A-210ENST00000537842 MPRIPQ6WCQ1 1025 aa3.37□□□□□ -1.87
TNFRSF1A-210ENST00000537842 NOP9Q86U38 636 aaKnown RBP3.37□□□□□ -1.87
TNFRSF1A-210ENST00000537842 METTL16Q86W50 562 aaKnown RBP3.37□□□□□ -1.87
TNFRSF1A-210ENST00000537842 IL17REQ8NFR9 667 aa3.37□□□□□ -1.87
TNFRSF1A-210ENST00000537842 WDR89Q96FK6 387 aaPredicted RBP3.37□□□□□ -1.87
TNFRSF1A-210ENST00000537842 FRMD6Q96NE9 622 aa3.37□□□□□ -1.87
TNFRSF1A-210ENST00000537842 NECAB3Q96P71 396 aaPredicted RBP3.37□□□□□ -1.87
TNFRSF1A-210ENST00000537842 PLEKHF1Q96S99 279 aa3.37□□□□□ -1.87
TNFRSF1A-210ENST00000537842 SOX17Q9H6I2 414 aaPredicted RBP3.37□□□□□ -1.87
TNFRSF1A-210ENST00000537842 PIDD1Q9HB75 910 aa3.37□□□□□ -1.87
TNFRSF1A-210ENST00000537842 CYP4F12Q9HCS2 524 aa3.37□□□□□ -1.87
TNFRSF1A-210ENST00000537842 SSU72Q9NP77 194 aaKnown RBP3.37□□□□□ -1.87
TNFRSF1A-210ENST00000537842 METTL5Q9NRN9 209 aaKnown RBP3.37□□□□□ -1.87
TNFRSF1A-210ENST00000537842 ASAP1Q9ULH1 1129 aa3.37□□□□□ -1.87
TNFRSF1A-210ENST00000537842 TLR6Q9Y2C9 796 aa3.37□□□□□ -1.87
TNFRSF1A-210ENST00000537842 TMA7Q9Y2S6 64 aaKnown RBP3.37□□□□□ -1.87
TNFRSF1A-210ENST00000537842 DAGLAQ9Y4D2 1042 aa3.37□□□□□ -1.87
TNFRSF1A-210ENST00000537842 SAMM50Q9Y512 469 aa3.37□□□□□ -1.87
TNFRSF1A-210ENST00000537842 RGPD2P0DJD1 1756 aa3.37□□□□□ -1.87
TNFRSF1A-210ENST00000537842 RTL1A6NKG5 1358 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms