RNA–Protein interactions for RNA: ENST00000537556.1

SRGAP1-202, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 2

Gene SRGAP1, Length 2,976 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-202ENST00000537556 ATP2A2P16615 1042 aaKnown RBP9.48□□□□□ -0.89
SRGAP1-202ENST00000537556 ITGB3BPQ13352 177 aaPredicted RBP9.48□□□□□ -0.89
SRGAP1-202ENST00000537556 HSP90AA4PQ58FG1 418 aa9.48□□□□□ -0.89
SRGAP1-202ENST00000537556 CPLX4Q7Z7G2 160 aa9.48□□□□□ -0.89
SRGAP1-202ENST00000537556 LCA5Q86VQ0 697 aa9.48□□□□□ -0.89
SRGAP1-202ENST00000537556 IQCKQ8N0W5 287 aa9.48□□□□□ -0.89
SRGAP1-202ENST00000537556 MLKLQ8NB16 471 aa9.48□□□□□ -0.89
SRGAP1-202ENST00000537556 TSEN2Q8NCE0 465 aaKnown RBP9.48□□□□□ -0.89
SRGAP1-202ENST00000537556 OPTNQ96CV9 577 aa9.48□□□□□ -0.89
SRGAP1-202ENST00000537556 BIN2Q9UBW5 565 aaPredicted RBP9.48□□□□□ -0.89
SRGAP1-202ENST00000537556 SWAP70Q9UH65 585 aa9.48□□□□□ -0.89
SRGAP1-202ENST00000537556 SUN2Q9UH99 717 aa9.48□□□□□ -0.89
SRGAP1-202ENST00000537556 NEO1Q92859 1461 aa9.48□□□□□ -0.89
SRGAP1-202ENST00000537556 PTPDC1A2A3K4 754 aa9.48□□□□□ -0.89
SRGAP1-202ENST00000537556 TNFRSF8P28908 595 aa9.48□□□□□ -0.89
SRGAP1-202ENST00000537556 ABL2P42684 1182 aa9.48□□□□□ -0.89
SRGAP1-202ENST00000537556 CACNA2D4Q7Z3S7 1137 aa9.48□□□□□ -0.89
SRGAP1-202ENST00000537556 NEK1Q96PY6 1258 aa9.48□□□□□ -0.89
SRGAP1-202ENST00000537556 SEC62Q99442 399 aaKnown RBP9.48□□□□□ -0.89
SRGAP1-202ENST00000537556 VCXQ9H320 206 aa9.48□□□□□ -0.89
SRGAP1-202ENST00000537556 CWC25Q9NXE8 425 aaPredicted RBP9.48□□□□□ -0.89
SRGAP1-202ENST00000537556 A0A1W2PP64 1363 aa9.47□□□□□ -0.89
SRGAP1-202ENST00000537556 ANO9A1A5B4 782 aa9.47□□□□□ -0.89
SRGAP1-202ENST00000537556 CCT8L1PA6NM43 557 aa9.47□□□□□ -0.89
SRGAP1-202ENST00000537556 CHL1O00533 1208 aa9.47□□□□□ -0.89
SRGAP1-202ENST00000537556 ATP1A1P05023 1023 aaKnown RBP9.47□□□□□ -0.89
SRGAP1-202ENST00000537556 GNAQP50148 359 aa9.47□□□□□ -0.89
SRGAP1-202ENST00000537556 FOSBP53539 338 aa9.47□□□□□ -0.89
SRGAP1-202ENST00000537556 CDC37Q16543 378 aaPredicted RBP9.47□□□□□ -0.89
SRGAP1-202ENST00000537556 DZIP3Q86Y13 1208 aaKnown RBP9.47□□□□□ -0.89
SRGAP1-202ENST00000537556 CCDC155Q8N6L0 562 aa9.47□□□□□ -0.89
SRGAP1-202ENST00000537556 LZICQ8WZA0 190 aa9.47□□□□□ -0.89
SRGAP1-202ENST00000537556 SNRKQ9NRH2 765 aa9.47□□□□□ -0.89
SRGAP1-202ENST00000537556 ATXN10Q9UBB4 475 aa9.47□□□□□ -0.89
SRGAP1-202ENST00000537556 HDAC6Q9UBN7 1215 aa9.47□□□□□ -0.89
SRGAP1-202ENST00000537556 GMEB1Q9Y692 573 aa9.47□□□□□ -0.89
SRGAP1-202ENST00000537556 ZMYM6O95789 1325 aa9.47□□□□□ -0.89
SRGAP1-202ENST00000537556 OVOS2A0A0G2JMS6 1433 aa9.47□□□□□ -0.89
SRGAP1-202ENST00000537556 OVOS2A0A0J9YW53 1432 aa9.47□□□□□ -0.89
SRGAP1-202ENST00000537556 OVOS2Q6IE36 1432 aa9.47□□□□□ -0.89
SRGAP1-202ENST00000537556 A0A1B0GVG6 124 aa9.47□□□□□ -0.89
SRGAP1-202ENST00000537556 EVI5O60447 810 aa9.47□□□□□ -0.89
SRGAP1-202ENST00000537556 PENKP01210 267 aaPredicted RBP9.47□□□□□ -0.89
SRGAP1-202ENST00000537556 POLE2P56282 527 aa9.47□□□□□ -0.89
SRGAP1-202ENST00000537556 PNOCQ13519 176 aa9.47□□□□□ -0.89
SRGAP1-202ENST00000537556 POLA2Q14181 598 aa9.47□□□□□ -0.89
SRGAP1-202ENST00000537556 CCDC102BQ68D86 513 aa9.47□□□□□ -0.89
SRGAP1-202ENST00000537556 DDX46Q7L014 1031 aaKnown RBP9.47□□□□□ -0.89
SRGAP1-202ENST00000537556 ILDR1Q86SU0 546 aaPredicted RBP9.47□□□□□ -0.89
SRGAP1-202ENST00000537556 AIDAQ96BJ3 306 aa9.47□□□□□ -0.89
SRGAP1-202ENST00000537556 PICK1Q9NRD5 415 aa9.47□□□□□ -0.89
SRGAP1-202ENST00000537556 PANK4Q9NVE7 773 aa9.47□□□□□ -0.89
SRGAP1-202ENST00000537556 AATFQ9NY61 560 aaKnown RBP eCLIP9.47□□□□□ -0.89
SRGAP1-202ENST00000537556 STIM2Q9P246 746 aa9.47□□□□□ -0.89
SRGAP1-202ENST00000537556 CLIC4Q9Y696 253 aa9.47□□□□□ -0.89
SRGAP1-202ENST00000537556 ZNF233A6NK53 670 aa9.46□□□□□ -0.89
SRGAP1-202ENST00000537556 SRGAP2O75044 1071 aa9.46□□□□□ -0.89
SRGAP1-202ENST00000537556 FLOT1O75955 427 aa9.46□□□□□ -0.89
SRGAP1-202ENST00000537556 ABL1P00519 1130 aa9.46□□□□□ -0.89
SRGAP1-202ENST00000537556 UBTFL1P0CB47 393 aaPredicted RBP9.46□□□□□ -0.89
SRGAP1-202ENST00000537556 CASP14P31944 242 aa9.46□□□□□ -0.89
SRGAP1-202ENST00000537556 MAGEA10P43363 369 aaPredicted RBP9.46□□□□□ -0.89
SRGAP1-202ENST00000537556 PSMC4P43686 418 aa9.46□□□□□ -0.89
SRGAP1-202ENST00000537556 Q4G0T1 1027 aa9.46□□□□□ -0.89
SRGAP1-202ENST00000537556 MFSD4BQ5TF39 518 aa9.46□□□□□ -0.89
SRGAP1-202ENST00000537556 TBC1D1Q86TI0 1168 aaPredicted RBP9.46□□□□□ -0.89
SRGAP1-202ENST00000537556 TRAPPC9Q96Q05 1148 aa9.46□□□□□ -0.89
SRGAP1-202ENST00000537556 ZCWPW1Q9H0M4 648 aa9.46□□□□□ -0.89
SRGAP1-202ENST00000537556 ECHDC1Q9NTX5 307 aa9.46□□□□□ -0.89
SRGAP1-202ENST00000537556 TMCO1Q9UM00 188 aa9.46□□□□□ -0.89
SRGAP1-202ENST00000537556 CRYBG1Q9Y4K1 1723 aa9.46□□□□□ -0.89
SRGAP1-202ENST00000537556 FAM83GA6ND36 823 aa9.46□□□□□ -0.9
SRGAP1-202ENST00000537556 E2F6O75461 281 aa9.46□□□□□ -0.9
SRGAP1-202ENST00000537556 PARP1P09874 1014 aaKnown RBP9.46□□□□□ -0.9
SRGAP1-202ENST00000537556 MPP3Q13368 585 aa9.46□□□□□ -0.9
SRGAP1-202ENST00000537556 SESTD1Q86VW0 696 aa9.46□□□□□ -0.9
SRGAP1-202ENST00000537556 AFAP1Q8N556 730 aa9.46□□□□□ -0.9
SRGAP1-202ENST00000537556 CCDC197Q8NCU1 140 aa9.46□□□□□ -0.9
SRGAP1-202ENST00000537556 FAM163AQ96GL9 167 aaPredicted RBP9.46□□□□□ -0.9
SRGAP1-202ENST00000537556 CCDC43Q96MW1 224 aaKnown RBP9.46□□□□□ -0.9
SRGAP1-202ENST00000537556 SLF1Q9BQI6 1058 aa9.46□□□□□ -0.9
SRGAP1-202ENST00000537556 UBE2OQ9C0C9 1292 aaKnown RBP9.46□□□□□ -0.9
SRGAP1-202ENST00000537556 VCX3BQ9H321 246 aa9.46□□□□□ -0.9
SRGAP1-202ENST00000537556 TAF1DQ9H5J8 278 aaPredicted RBP9.46□□□□□ -0.9
SRGAP1-202ENST00000537556 VCX3AQ9NNX9 186 aa9.46□□□□□ -0.9
SRGAP1-202ENST00000537556 DMAP1Q9NPF5 467 aaPredicted RBP9.46□□□□□ -0.9
SRGAP1-202ENST00000537556 PCMTD2Q9NV79 361 aa9.46□□□□□ -0.9
SRGAP1-202ENST00000537556 GALNT8Q9NY28 637 aa9.46□□□□□ -0.9
SRGAP1-202ENST00000537556 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.46□□□□□ -0.9
SRGAP1-202ENST00000537556 SLC12A4Q9UP95 1085 aa9.46□□□□□ -0.9
SRGAP1-202ENST00000537556 ANKRD26Q9UPS8 1709 aa9.46□□□□□ -0.9
SRGAP1-202ENST00000537556 IFIT3O14879 490 aaKnown RBP9.45□□□□□ -0.9
SRGAP1-202ENST00000537556 KRT86O43790 486 aa9.45□□□□□ -0.9
SRGAP1-202ENST00000537556 GJA8P48165 433 aa9.45□□□□□ -0.9
SRGAP1-202ENST00000537556 ATP11AP98196 1134 aa9.45□□□□□ -0.9
SRGAP1-202ENST00000537556 C2orf54Q08AI8 447 aa9.45□□□□□ -0.9
SRGAP1-202ENST00000537556 TRIM14Q14142 442 aa9.45□□□□□ -0.9
SRGAP1-202ENST00000537556 ELOA2Q8IYF1 753 aaPredicted RBP9.45□□□□□ -0.9
SRGAP1-202ENST00000537556 CLASRPQ8N2M8 674 aaKnown RBP9.45□□□□□ -0.9
SRGAP1-202ENST00000537556 FNBP4Q8N3X1 1017 aaPredicted RBP9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms