RNA–Protein interactions for RNA: ENST00000537435.2

USP44-203, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-203ENST00000537435 PDS5AQ29RF7 1337 aaKnown RBP16.21■□□□□ 0.19
USP44-203ENST00000537435 BAZ2BQ9UIF8 2168 aaKnown RBP16.21■□□□□ 0.19
USP44-203ENST00000537435 A0A0U1RQJ8 604 aa16.21■□□□□ 0.18
USP44-203ENST00000537435 KDM4FA0A1W2PPD8 638 aa16.21■□□□□ 0.18
USP44-203ENST00000537435 SEC31AO94979 1220 aaKnown RBP16.21■□□□□ 0.18
USP44-203ENST00000537435 KIF5BP33176 963 aa16.21■□□□□ 0.18
USP44-203ENST00000537435 FXR1P51114 621 aaKnown RBP eCLIP16.21■□□□□ 0.18
USP44-203ENST00000537435 KRT31Q15323 416 aa16.21■□□□□ 0.18
USP44-203ENST00000537435 CNGA4Q8IV77 575 aa16.21■□□□□ 0.18
USP44-203ENST00000537435 ATRIPQ8WXE1 791 aa16.21■□□□□ 0.18
USP44-203ENST00000537435 MCM9Q9NXL9 1143 aa16.21■□□□□ 0.18
USP44-203ENST00000537435 SPATA31A5Q5VU36 1347 aa16.2■□□□□ 0.18
USP44-203ENST00000537435 ITIH6Q6UXX5 1313 aa16.2■□□□□ 0.18
USP44-203ENST00000537435 SPATA31A7Q8IWB4 1347 aa16.2■□□□□ 0.18
USP44-203ENST00000537435 ROBO1Q9Y6N7 1651 aa16.2■□□□□ 0.18
USP44-203ENST00000537435 PLA2G4AP47712 749 aa16.2■□□□□ 0.18
USP44-203ENST00000537435 PAK1Q13153 545 aa16.2■□□□□ 0.18
USP44-203ENST00000537435 RSRC2Q7L4I2 434 aaKnown RBP16.2■□□□□ 0.18
USP44-203ENST00000537435 GPR161Q8N6U8 529 aaKnown RBP16.2■□□□□ 0.18
USP44-203ENST00000537435 NLRP3Q96P20 1036 aa16.2■□□□□ 0.18
USP44-203ENST00000537435 LIMA1Q9UHB6 759 aaKnown RBP16.2■□□□□ 0.18
USP44-203ENST00000537435 RWDD2AQ9UIY3 292 aa16.2■□□□□ 0.18
USP44-203ENST00000537435 N4BP3O15049 544 aa16.2■□□□□ 0.18
USP44-203ENST00000537435 USP17L8P0C7I0 530 aa16.2■□□□□ 0.18
USP44-203ENST00000537435 CALML3P27482 149 aa16.2■□□□□ 0.18
USP44-203ENST00000537435 CDC25AP30304 524 aa16.2■□□□□ 0.18
USP44-203ENST00000537435 BLIDQ8IZY5 108 aa16.2■□□□□ 0.18
USP44-203ENST00000537435 KAT14Q9H8E8 782 aa16.2■□□□□ 0.18
USP44-203ENST00000537435 FAM205AQ6ZU69 1335 aa16.19■□□□□ 0.18
USP44-203ENST00000537435 ZNF658Q5TYW1 1059 aaPredicted RBP16.19■□□□□ 0.18
USP44-203ENST00000537435 ARL6IP4Q66PJ3 421 aaKnown RBP16.19■□□□□ 0.18
USP44-203ENST00000537435 RASGRP2Q7LDG7 609 aa16.19■□□□□ 0.18
USP44-203ENST00000537435 CCDC24Q8N4L8 307 aa16.19■□□□□ 0.18
USP44-203ENST00000537435 C4orf32Q8N8J7 132 aa16.19■□□□□ 0.18
USP44-203ENST00000537435 NELFBQ8WX92 580 aa16.19■□□□□ 0.18
USP44-203ENST00000537435 GPKOWQ92917 476 aaPredicted RBP eCLIP16.19■□□□□ 0.18
USP44-203ENST00000537435 CCDC51Q96ER9 411 aa16.19■□□□□ 0.18
USP44-203ENST00000537435 ANKRD2Q9GZV1 360 aa16.19■□□□□ 0.18
USP44-203ENST00000537435 VPS16Q9H269 839 aa16.19■□□□□ 0.18
USP44-203ENST00000537435 RPN1P04843 607 aaKnown RBP16.19■□□□□ 0.18
USP44-203ENST00000537435 LONP1P36776 959 aaKnown RBP16.19■□□□□ 0.18
USP44-203ENST00000537435 COPB1P53618 953 aaKnown RBP16.19■□□□□ 0.18
USP44-203ENST00000537435 TFAP4Q01664 338 aa16.19■□□□□ 0.18
USP44-203ENST00000537435 TXNRD3Q86VQ6 643 aa16.19■□□□□ 0.18
USP44-203ENST00000537435 CREBRFQ8IUR6 639 aa16.19■□□□□ 0.18
USP44-203ENST00000537435 RASGRP4Q8TDF6 673 aa16.19■□□□□ 0.18
USP44-203ENST00000537435 AHDC1Q5TGY3 1603 aaPredicted RBP16.18■□□□□ 0.18
USP44-203ENST00000537435 LRRC10BA6NIK2 292 aa16.18■□□□□ 0.18
USP44-203ENST00000537435 KIF5CO60282 957 aa16.18■□□□□ 0.18
USP44-203ENST00000537435 TXLNAP40222 546 aa16.18■□□□□ 0.18
USP44-203ENST00000537435 DZIP1Q86YF9 867 aaKnown RBP16.18■□□□□ 0.18
USP44-203ENST00000537435 STAG2Q8N3U4 1231 aa16.18■□□□□ 0.18
USP44-203ENST00000537435 GOLGA1Q92805 767 aa16.18■□□□□ 0.18
USP44-203ENST00000537435 NYXQ9GZU5 481 aa16.18■□□□□ 0.18
USP44-203ENST00000537435 RMND1Q9NWS8 449 aa16.18■□□□□ 0.18
USP44-203ENST00000537435 TAB2Q9NYJ8 693 aa16.18■□□□□ 0.18
USP44-203ENST00000537435 GDAQ9Y2T3 454 aa16.18■□□□□ 0.18
USP44-203ENST00000537435 MYH13Q9UKX3 1938 aa16.18■□□□□ 0.18
USP44-203ENST00000537435 FECHP22830 423 aa16.18■□□□□ 0.18
USP44-203ENST00000537435 SPAG1Q07617 926 aa16.18■□□□□ 0.18
USP44-203ENST00000537435 BARGINQ6ZT62 677 aa16.18■□□□□ 0.18
USP44-203ENST00000537435 NBPF5PQ86XG9 351 aaPredicted RBP16.18■□□□□ 0.18
USP44-203ENST00000537435 PNMA1Q8ND90 353 aa16.18■□□□□ 0.18
USP44-203ENST00000537435 RABGGTAQ92696 567 aa16.18■□□□□ 0.18
USP44-203ENST00000537435 IL17RBQ9NRM6 502 aa16.18■□□□□ 0.18
USP44-203ENST00000537435 PCDHA4Q9UN74 947 aa16.18■□□□□ 0.18
USP44-203ENST00000537435 MAPK8IP1Q9UQF2 711 aa16.18■□□□□ 0.18
USP44-203ENST00000537435 NRAPQ86VF7 1730 aa16.17■□□□□ 0.18
USP44-203ENST00000537435 KCNJ18B7U540 433 aa16.17■□□□□ 0.18
USP44-203ENST00000537435 STAT6P42226 847 aa16.17■□□□□ 0.18
USP44-203ENST00000537435 KCNJ12Q14500 433 aa16.17■□□□□ 0.18
USP44-203ENST00000537435 TCP11X2Q5H9J9 407 aa16.17■□□□□ 0.18
USP44-203ENST00000537435 CC2D1AQ6P1N0 951 aaPredicted RBP16.17■□□□□ 0.18
USP44-203ENST00000537435 ANKRD20A12PQ8NF67 263 aa16.17■□□□□ 0.18
USP44-203ENST00000537435 SETDB2Q96T68 719 aa16.17■□□□□ 0.18
USP44-203ENST00000537435 PARD6BQ9BYG5 372 aa16.17■□□□□ 0.18
USP44-203ENST00000537435 SRP68Q9UHB9 627 aaKnown RBP16.17■□□□□ 0.18
USP44-203ENST00000537435 COL5A3P25940 1745 aaPredicted RBP16.17■□□□□ 0.18
USP44-203ENST00000537435 PRCPP42785 496 aa16.17■□□□□ 0.18
USP44-203ENST00000537435 ERVK-24P63145 666 aa16.17■□□□□ 0.18
USP44-203ENST00000537435 ZNF569Q5MCW4 686 aa16.17■□□□□ 0.18
USP44-203ENST00000537435 C12orf60Q5U649 245 aa16.17■□□□□ 0.18
USP44-203ENST00000537435 TYW1BQ6NUM6 668 aa16.17■□□□□ 0.18
USP44-203ENST00000537435 DGKHQ86XP1 1220 aa16.17■□□□□ 0.18
USP44-203ENST00000537435 ACRBPQ8NEB7 543 aa16.17■□□□□ 0.18
USP44-203ENST00000537435 DYNLL2Q96FJ2 89 aa16.17■□□□□ 0.18
USP44-203ENST00000537435 SH3GLB2Q9NR46 395 aa16.17■□□□□ 0.18
USP44-203ENST00000537435 ABHD10Q9NUJ1 306 aa16.17■□□□□ 0.18
USP44-203ENST00000537435 NUTM2BA6NNL0 878 aaPredicted RBP16.16■□□□□ 0.18
USP44-203ENST00000537435 NUTM2EB1AL46 878 aaPredicted RBP16.16■□□□□ 0.18
USP44-203ENST00000537435 ATP8B1O43520 1251 aa16.16■□□□□ 0.18
USP44-203ENST00000537435 USP5P45974 858 aa16.16■□□□□ 0.18
USP44-203ENST00000537435 TMTC1Q8IUR5 882 aa16.16■□□□□ 0.18
USP44-203ENST00000537435 NUP88Q99567 741 aaPredicted RBP16.16■□□□□ 0.18
USP44-203ENST00000537435 ZSWIM4Q9H7M6 989 aa16.16■□□□□ 0.18
USP44-203ENST00000537435 DISC1Q9NRI5 854 aa16.16■□□□□ 0.18
USP44-203ENST00000537435 CNTNAP4Q9C0A0 1308 aa16.16■□□□□ 0.18
USP44-203ENST00000537435 LAMB1P07942 1786 aa16.16■□□□□ 0.18
USP44-203ENST00000537435 RNF225M0QZC1 329 aaPredicted RBP16.16■□□□□ 0.18
USP44-203ENST00000537435 TBC1D8O95759 1140 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms