RNA–Protein interactions for RNA: ENST00000536554.5

TOM1L1-203, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

TSL 2 BASIC

Gene TOM1L1, Length 1,522 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-203ENST00000536554 MTMR4Q9NYA4 1195 aa9.44□□□□□ -0.9
TOM1L1-203ENST00000536554 ECM29Q5VYK3 1845 aa9.44□□□□□ -0.9
TOM1L1-203ENST00000536554 PLIN4Q96Q06 1357 aa9.43□□□□□ -0.9
TOM1L1-203ENST00000536554 LAMB1P07942 1786 aa9.43□□□□□ -0.9
TOM1L1-203ENST00000536554 CCDC196A0A1B0GTZ2 297 aa9.43□□□□□ -0.9
TOM1L1-203ENST00000536554 FAM196BA6NMK8 535 aa9.43□□□□□ -0.9
TOM1L1-203ENST00000536554 GOLGA8AA7E2F4 631 aa9.43□□□□□ -0.9
TOM1L1-203ENST00000536554 JAK2O60674 1132 aa9.43□□□□□ -0.9
TOM1L1-203ENST00000536554 DDAH1O94760 285 aa9.43□□□□□ -0.9
TOM1L1-203ENST00000536554 FDPSP14324 419 aaKnown RBP9.43□□□□□ -0.9
TOM1L1-203ENST00000536554 RXRAP19793 462 aa9.43□□□□□ -0.9
TOM1L1-203ENST00000536554 SYT1P21579 422 aa9.43□□□□□ -0.9
TOM1L1-203ENST00000536554 LMOD1P29536 600 aaPredicted RBP9.43□□□□□ -0.9
TOM1L1-203ENST00000536554 HMGN5P82970 282 aaKnown RBP9.43□□□□□ -0.9
TOM1L1-203ENST00000536554 PKP1Q13835 747 aa9.43□□□□□ -0.9
TOM1L1-203ENST00000536554 RAB3GAP1Q15042 981 aa9.43□□□□□ -0.9
TOM1L1-203ENST00000536554 MICU3Q86XE3 530 aa9.43□□□□□ -0.9
TOM1L1-203ENST00000536554 CCDC102AQ96A19 550 aa9.43□□□□□ -0.9
TOM1L1-203ENST00000536554 KAT14Q9H8E8 782 aa9.43□□□□□ -0.9
TOM1L1-203ENST00000536554 STX8Q9UNK0 236 aa9.43□□□□□ -0.9
TOM1L1-203ENST00000536554 SCAF8Q9UPN6 1271 aaKnown RBP9.43□□□□□ -0.9
TOM1L1-203ENST00000536554 ZDHHC9Q9Y397 364 aa9.43□□□□□ -0.9
TOM1L1-203ENST00000536554 PTPDC1A2A3K4 754 aa9.42□□□□□ -0.9
TOM1L1-203ENST00000536554 CPLX1O14810 134 aa9.42□□□□□ -0.9
TOM1L1-203ENST00000536554 BRD1O95696 1058 aa9.42□□□□□ -0.9
TOM1L1-203ENST00000536554 TOP1P11387 765 aaKnown RBP9.42□□□□□ -0.9
TOM1L1-203ENST00000536554 IFNAR1P17181 557 aa9.42□□□□□ -0.9
TOM1L1-203ENST00000536554 RRP1BQ14684 758 aaKnown RBP9.42□□□□□ -0.9
TOM1L1-203ENST00000536554 RTN1Q16799 776 aa9.42□□□□□ -0.9
TOM1L1-203ENST00000536554 ANGEL2Q5VTE6 544 aaKnown RBP9.42□□□□□ -0.9
TOM1L1-203ENST00000536554 LARP1BQ659C4 914 aaKnown RBP9.42□□□□□ -0.9
TOM1L1-203ENST00000536554 CPLX2Q6PUV4 134 aaKnown RBP9.42□□□□□ -0.9
TOM1L1-203ENST00000536554 SIAH1Q8IUQ4 282 aa9.42□□□□□ -0.9
TOM1L1-203ENST00000536554 APOBEC3FQ8IUX4 373 aaKnown RBP9.42□□□□□ -0.9
TOM1L1-203ENST00000536554 CCDC144CPQ8IYA2 1237 aa9.42□□□□□ -0.9
TOM1L1-203ENST00000536554 PNMA1Q8ND90 353 aa9.42□□□□□ -0.9
TOM1L1-203ENST00000536554 NUP133Q8WUM0 1156 aa9.42□□□□□ -0.9
TOM1L1-203ENST00000536554 MKL1Q969V6 931 aa9.42□□□□□ -0.9
TOM1L1-203ENST00000536554 KANSL2Q9H9L4 492 aa9.42□□□□□ -0.9
TOM1L1-203ENST00000536554 RBM28Q9NW13 759 aaKnown RBP9.42□□□□□ -0.9
TOM1L1-203ENST00000536554 CLIP2Q9UDT6 1046 aa9.42□□□□□ -0.9
TOM1L1-203ENST00000536554 PHF20L1A8MW92 1017 aa9.41□□□□□ -0.9
TOM1L1-203ENST00000536554 MPHOSPH10O00566 681 aaKnown RBP9.41□□□□□ -0.9
TOM1L1-203ENST00000536554 IRF6O14896 467 aa9.41□□□□□ -0.9
TOM1L1-203ENST00000536554 STX6O43752 255 aa9.41□□□□□ -0.9
TOM1L1-203ENST00000536554 CDKL5O76039 1030 aa9.41□□□□□ -0.9
TOM1L1-203ENST00000536554 TTLL1O95922 423 aa9.41□□□□□ -0.9
TOM1L1-203ENST00000536554 PDCP20941 246 aa9.41□□□□□ -0.9
TOM1L1-203ENST00000536554 GUCY1A2P33402 732 aa9.41□□□□□ -0.9
TOM1L1-203ENST00000536554 JAG1P78504 1218 aa9.41□□□□□ -0.9
TOM1L1-203ENST00000536554 ABCB5Q2M3G0 1257 aa9.41□□□□□ -0.9
TOM1L1-203ENST00000536554 TMEM179Q6ZVK1 233 aa9.41□□□□□ -0.9
TOM1L1-203ENST00000536554 USP50Q70EL3 339 aaPredicted RBP9.41□□□□□ -0.9
TOM1L1-203ENST00000536554 MIGA2Q7L4E1 593 aa9.41□□□□□ -0.9
TOM1L1-203ENST00000536554 NBPF11Q86T75 865 aa9.41□□□□□ -0.9
TOM1L1-203ENST00000536554 DDX11Q96FC9 970 aa9.41□□□□□ -0.9
TOM1L1-203ENST00000536554 NYAP2Q9P242 653 aa9.41□□□□□ -0.9
TOM1L1-203ENST00000536554 PITPNM2Q9BZ72 1349 aa9.41□□□□□ -0.9
TOM1L1-203ENST00000536554 POTECB2RU33 542 aa9.41□□□□□ -0.9
TOM1L1-203ENST00000536554 FUT2Q10981 343 aa9.41□□□□□ -0.9
TOM1L1-203ENST00000536554 SEPT2Q15019 361 aa9.41□□□□□ -0.9
TOM1L1-203ENST00000536554 NBPF12Q5TAG4 269 aaPredicted RBP9.41□□□□□ -0.9
TOM1L1-203ENST00000536554 FAM184AQ8NB25 1140 aa9.41□□□□□ -0.9
TOM1L1-203ENST00000536554 RGS22Q8NE09 1264 aa9.41□□□□□ -0.9
TOM1L1-203ENST00000536554 CTCFLQ8NI51 663 aaPredicted RBP9.41□□□□□ -0.9
TOM1L1-203ENST00000536554 TNPO1Q92973 898 aaKnown RBP9.41□□□□□ -0.9
TOM1L1-203ENST00000536554 CABP5Q9NP86 173 aa9.41□□□□□ -0.9
TOM1L1-203ENST00000536554 GGA3Q9NZ52 723 aa9.41□□□□□ -0.9
TOM1L1-203ENST00000536554 KIF3AQ9Y496 699 aa9.41□□□□□ -0.9
TOM1L1-203ENST00000536554 PPP2R3BQ9Y5P8 575 aa9.41□□□□□ -0.9
TOM1L1-203ENST00000536554 WDR33Q9C0J8 1336 aaKnown RBP9.4□□□□□ -0.9
TOM1L1-203ENST00000536554 SIPA1L1O43166 1804 aa9.4□□□□□ -0.9
TOM1L1-203ENST00000536554 PALM3A6NDB9 673 aaPredicted RBP9.4□□□□□ -0.91
TOM1L1-203ENST00000536554 TRIM66O15016 1216 aa9.4□□□□□ -0.91
TOM1L1-203ENST00000536554 PPFIA3O75145 1194 aa9.4□□□□□ -0.91
TOM1L1-203ENST00000536554 GDF11O95390 407 aa9.4□□□□□ -0.91
TOM1L1-203ENST00000536554 FMNL1O95466 1100 aaPredicted RBP9.4□□□□□ -0.91
TOM1L1-203ENST00000536554 GH2P01242 217 aa9.4□□□□□ -0.91
TOM1L1-203ENST00000536554 EEF2P13639 858 aaKnown RBP9.4□□□□□ -0.91
TOM1L1-203ENST00000536554 COL9A1P20849 921 aa9.4□□□□□ -0.91
TOM1L1-203ENST00000536554 PTPREP23469 700 aa9.4□□□□□ -0.91
TOM1L1-203ENST00000536554 KIF5BP33176 963 aa9.4□□□□□ -0.91
TOM1L1-203ENST00000536554 EPHX2P34913 555 aa9.4□□□□□ -0.91
TOM1L1-203ENST00000536554 CAP2P40123 477 aa9.4□□□□□ -0.91
TOM1L1-203ENST00000536554 GNAQP50148 359 aa9.4□□□□□ -0.91
TOM1L1-203ENST00000536554 SSRP1Q08945 709 aaKnown RBP9.4□□□□□ -0.91
TOM1L1-203ENST00000536554 GRM4Q14833 912 aa9.4□□□□□ -0.91
TOM1L1-203ENST00000536554 SHROOM1Q2M3G4 852 aaPredicted RBP9.4□□□□□ -0.91
TOM1L1-203ENST00000536554 PADI6Q6TGC4 694 aa9.4□□□□□ -0.91
TOM1L1-203ENST00000536554 CLEC17AQ6ZS10 378 aa9.4□□□□□ -0.91
TOM1L1-203ENST00000536554 TMTC3Q6ZXV5 915 aa9.4□□□□□ -0.91
TOM1L1-203ENST00000536554 SRBD1Q8N5C6 995 aaKnown RBP9.4□□□□□ -0.91
TOM1L1-203ENST00000536554 PHKBQ93100 1093 aa9.4□□□□□ -0.91
TOM1L1-203ENST00000536554 HOOK2Q96ED9 719 aa9.4□□□□□ -0.91
TOM1L1-203ENST00000536554 ORC3Q9UBD5 711 aaPredicted RBP9.4□□□□□ -0.91
TOM1L1-203ENST00000536554 MAD2L2Q9UI95 211 aa9.4□□□□□ -0.91
TOM1L1-203ENST00000536554 MTMR6Q9Y217 621 aa9.4□□□□□ -0.91
TOM1L1-203ENST00000536554 IQCA1LA6NCM1 817 aa9.39□□□□□ -0.91
TOM1L1-203ENST00000536554 PRPF3O43395 683 aaKnown RBP9.39□□□□□ -0.91
TOM1L1-203ENST00000536554 PLEKHA8P1O95397 391 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms