RNA–Protein interactions for RNA: ENST00000535871.1

CDCA3-205, Transcript of cell division cycle associated 3, humanhuman

TSL 5

Gene CDCA3, Length 454 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-205ENST00000535871 WDR33Q9C0J8 1336 aaKnown RBP7.55□□□□□ -1.2
CDCA3-205ENST00000535871 PALM3A6NDB9 673 aaPredicted RBP7.55□□□□□ -1.2
CDCA3-205ENST00000535871 GOLGA8AA7E2F4 631 aa7.55□□□□□ -1.2
CDCA3-205ENST00000535871 PPP1R12BO60237 982 aaPredicted RBP7.55□□□□□ -1.2
CDCA3-205ENST00000535871 EGFRP00533 1210 aa7.55□□□□□ -1.2
CDCA3-205ENST00000535871 FDX1P10109 184 aa7.55□□□□□ -1.2
CDCA3-205ENST00000535871 XBP1P17861 261 aa7.55□□□□□ -1.2
CDCA3-205ENST00000535871 NF2P35240 595 aa7.55□□□□□ -1.2
CDCA3-205ENST00000535871 CACNB3P54284 484 aa7.55□□□□□ -1.2
CDCA3-205ENST00000535871 COL9A3Q14050 684 aaPredicted RBP7.55□□□□□ -1.2
CDCA3-205ENST00000535871 GRM4Q14833 912 aa7.55□□□□□ -1.2
CDCA3-205ENST00000535871 SKIV2LQ15477 1246 aaKnown RBP7.55□□□□□ -1.2
CDCA3-205ENST00000535871 ATL3Q6DD88 541 aa7.55□□□□□ -1.2
CDCA3-205ENST00000535871 USP48Q86UV5 1035 aa7.55□□□□□ -1.2
CDCA3-205ENST00000535871 PDCD7Q8N8D1 485 aaKnown RBP7.55□□□□□ -1.2
CDCA3-205ENST00000535871 SLC44A5Q8NCS7 719 aa7.55□□□□□ -1.2
CDCA3-205ENST00000535871 RBM46Q8TBY0 533 aaKnown RBP7.55□□□□□ -1.2
CDCA3-205ENST00000535871 DCAF4Q8WV16 495 aa7.55□□□□□ -1.2
CDCA3-205ENST00000535871 TCEANC2Q96MN5 208 aa7.55□□□□□ -1.2
CDCA3-205ENST00000535871 TMEM47Q9BQJ4 181 aa7.55□□□□□ -1.2
CDCA3-205ENST00000535871 WDR18Q9BV38 432 aa7.55□□□□□ -1.2
CDCA3-205ENST00000535871 SPZ1Q9BXG8 430 aa7.55□□□□□ -1.2
CDCA3-205ENST00000535871 ARHGEF10LQ9HCE6 1279 aa7.55□□□□□ -1.2
CDCA3-205ENST00000535871 SH3GLB2Q9NR46 395 aa7.55□□□□□ -1.2
CDCA3-205ENST00000535871 FAM217BQ9NTX9 383 aaPredicted RBP7.55□□□□□ -1.2
CDCA3-205ENST00000535871 ZBTB21Q9ULJ3 1066 aa7.55□□□□□ -1.2
CDCA3-205ENST00000535871 TMX2Q9Y320 296 aa7.55□□□□□ -1.2
CDCA3-205ENST00000535871 POTECB2RU33 542 aa7.54□□□□□ -1.2
CDCA3-205ENST00000535871 C19orf81C9J6K1 198 aa7.54□□□□□ -1.2
CDCA3-205ENST00000535871 PRPF3O43395 683 aaKnown RBP7.54□□□□□ -1.2
CDCA3-205ENST00000535871 EVI5O60447 810 aa7.54□□□□□ -1.2
CDCA3-205ENST00000535871 DEXIO95424 95 aa7.54□□□□□ -1.2
CDCA3-205ENST00000535871 LARGE1O95461 756 aa7.54□□□□□ -1.2
CDCA3-205ENST00000535871 FMNL1O95466 1100 aaPredicted RBP7.54□□□□□ -1.2
CDCA3-205ENST00000535871 BRD1O95696 1058 aa7.54□□□□□ -1.2
CDCA3-205ENST00000535871 AKR1B1P15121 316 aa7.54□□□□□ -1.2
CDCA3-205ENST00000535871 PTMSP20962 102 aa7.54□□□□□ -1.2
CDCA3-205ENST00000535871 USP14P54578 494 aa7.54□□□□□ -1.2
CDCA3-205ENST00000535871 ICA1Q05084 483 aa7.54□□□□□ -1.2
CDCA3-205ENST00000535871 FUT2Q10981 343 aa7.54□□□□□ -1.2
CDCA3-205ENST00000535871 ST3GAL1Q11201 340 aa7.54□□□□□ -1.2
CDCA3-205ENST00000535871 RAB3GAP1Q15042 981 aa7.54□□□□□ -1.2
CDCA3-205ENST00000535871 FAM47AQ5JRC9 791 aa7.54□□□□□ -1.2
CDCA3-205ENST00000535871 GALNT17Q6IS24 598 aa7.54□□□□□ -1.2
CDCA3-205ENST00000535871 TMTC3Q6ZXV5 915 aa7.54□□□□□ -1.2
CDCA3-205ENST00000535871 CHST3Q7LGC8 479 aa7.54□□□□□ -1.2
CDCA3-205ENST00000535871 LDHDQ86WU2 507 aa7.54□□□□□ -1.2
CDCA3-205ENST00000535871 MICU3Q86XE3 530 aa7.54□□□□□ -1.2
CDCA3-205ENST00000535871 CCDC83Q8IWF9 413 aa7.54□□□□□ -1.2
CDCA3-205ENST00000535871 KLRG1Q96E93 195 aa7.54□□□□□ -1.2
CDCA3-205ENST00000535871 LRRC2Q9BYS8 371 aa7.54□□□□□ -1.2
CDCA3-205ENST00000535871 KIAA1683Q9H0B3 1180 aa7.54□□□□□ -1.2
CDCA3-205ENST00000535871 ZSCAN16Q9H4T2 348 aaPredicted RBP7.54□□□□□ -1.2
CDCA3-205ENST00000535871 AS3MTQ9HBK9 375 aa7.54□□□□□ -1.2
CDCA3-205ENST00000535871 INCENPQ9NQS7 918 aa7.54□□□□□ -1.2
CDCA3-205ENST00000535871 STX8Q9UNK0 236 aa7.54□□□□□ -1.2
CDCA3-205ENST00000535871 SHTN1A0MZ66 631 aa7.53□□□□□ -1.2
CDCA3-205ENST00000535871 PTPDC1A2A3K4 754 aa7.53□□□□□ -1.2
CDCA3-205ENST00000535871 USP17L5A8MUK1 530 aa7.53□□□□□ -1.2
CDCA3-205ENST00000535871 SMIM22K7EJ46 135 aa7.53□□□□□ -1.2
CDCA3-205ENST00000535871 STX6O43752 255 aa7.53□□□□□ -1.2
CDCA3-205ENST00000535871 CTDNEP1O95476 244 aa7.53□□□□□ -1.2
CDCA3-205ENST00000535871 GH2P01242 217 aa7.53□□□□□ -1.2
CDCA3-205ENST00000535871 PARP1P09874 1014 aaKnown RBP7.53□□□□□ -1.2
CDCA3-205ENST00000535871 PDHBP11177 359 aa7.53□□□□□ -1.2
CDCA3-205ENST00000535871 GJB2P29033 226 aa7.53□□□□□ -1.2
CDCA3-205ENST00000535871 SSTR3P32745 418 aaPredicted RBP7.53□□□□□ -1.2
CDCA3-205ENST00000535871 GUCY1A2P33402 732 aa7.53□□□□□ -1.2
CDCA3-205ENST00000535871 IREB2P48200 963 aaKnown RBP7.53□□□□□ -1.2
CDCA3-205ENST00000535871 AKAP17AQ02040 695 aaKnown RBP7.53□□□□□ -1.2
CDCA3-205ENST00000535871 EVX2Q03828 476 aa7.53□□□□□ -1.2
CDCA3-205ENST00000535871 SSRP1Q08945 709 aaKnown RBP7.53□□□□□ -1.2
CDCA3-205ENST00000535871 ZNF543Q08ER8 600 aa7.53□□□□□ -1.2
CDCA3-205ENST00000535871 LARP1BQ659C4 914 aaKnown RBP7.53□□□□□ -1.2
CDCA3-205ENST00000535871 MCTP2Q6DN12 878 aa7.53□□□□□ -1.2
CDCA3-205ENST00000535871 BTNL9Q6UXG8 535 aa7.53□□□□□ -1.2
CDCA3-205ENST00000535871 KRT26Q7Z3Y9 468 aa7.53□□□□□ -1.2
CDCA3-205ENST00000535871 NBPF11Q86T75 865 aa7.53□□□□□ -1.2
CDCA3-205ENST00000535871 SCYL3Q8IZE3 742 aa7.53□□□□□ -1.2
CDCA3-205ENST00000535871 SAMD3Q8N6K7 520 aa7.53□□□□□ -1.2
CDCA3-205ENST00000535871 FAM184AQ8NB25 1140 aa7.53□□□□□ -1.2
CDCA3-205ENST00000535871 FBXO18Q8NFZ0 1043 aa7.53□□□□□ -1.2
CDCA3-205ENST00000535871 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.53□□□□□ -1.2
CDCA3-205ENST00000535871 NKX2-3Q8TAU0 364 aa7.53□□□□□ -1.2
CDCA3-205ENST00000535871 MTMR8Q96EF0 704 aa7.53□□□□□ -1.2
CDCA3-205ENST00000535871 POM121Q96HA1 1249 aa7.53□□□□□ -1.2
CDCA3-205ENST00000535871 C12orf42Q96LP6 360 aa7.53□□□□□ -1.2
CDCA3-205ENST00000535871 TMEM121BQ9BXQ6 578 aaPredicted RBP7.53□□□□□ -1.2
CDCA3-205ENST00000535871 GLT8D2Q9H1C3 349 aa7.53□□□□□ -1.2
CDCA3-205ENST00000535871 RIOX1Q9H6W3 641 aa7.53□□□□□ -1.2
CDCA3-205ENST00000535871 ORC3Q9UBD5 711 aaPredicted RBP7.53□□□□□ -1.2
CDCA3-205ENST00000535871 POLR2AP24928 1970 aaKnown RBP7.53□□□□□ -1.2
CDCA3-205ENST00000535871 MYH4Q9Y623 1939 aa7.52□□□□□ -1.2
CDCA3-205ENST00000535871 ESYT2A0FGR8 921 aa7.52□□□□□ -1.21
CDCA3-205ENST00000535871 MPHOSPH10O00566 681 aaKnown RBP7.52□□□□□ -1.21
CDCA3-205ENST00000535871 NMT2O60551 498 aa7.52□□□□□ -1.21
CDCA3-205ENST00000535871 EEF2P13639 858 aaKnown RBP7.52□□□□□ -1.21
CDCA3-205ENST00000535871 SYT1P21579 422 aa7.52□□□□□ -1.21
CDCA3-205ENST00000535871 CALML3P27482 149 aa7.52□□□□□ -1.21
CDCA3-205ENST00000535871 CDC27P30260 824 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms