RNA–Protein interactions for RNA: ENST00000535648.5

TNC-210, Transcript of tenascin C, humanhuman

TSL 5 BASIC

Gene TNC, Length 7,508 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-210ENST00000535648 CCDC87Q9NVE4 849 aa10.48□□□□□ -0.73
TNC-210ENST00000535648 TTLL3Q9Y4R7 772 aa10.48□□□□□ -0.73
TNC-210ENST00000535648 PCDHB13Q9Y5F0 798 aa10.48□□□□□ -0.73
TNC-210ENST00000535648 PPFIA4O75335 1185 aa10.48□□□□□ -0.73
TNC-210ENST00000535648 ZNF853P0CG23 659 aa10.48□□□□□ -0.73
TNC-210ENST00000535648 IL13P35225 146 aa10.48□□□□□ -0.73
TNC-210ENST00000535648 BANK1Q8NDB2 785 aa10.48□□□□□ -0.73
TNC-210ENST00000535648 ATP8A2Q9NTI2 1148 aa10.48□□□□□ -0.73
TNC-210ENST00000535648 RAB20Q9NX57 234 aa10.48□□□□□ -0.73
TNC-210ENST00000535648 SSH2Q76I76 1423 aa10.48□□□□□ -0.73
TNC-210ENST00000535648 KCNJ18B7U540 433 aa10.48□□□□□ -0.73
TNC-210ENST00000535648 CSPG5O95196 566 aa10.48□□□□□ -0.73
TNC-210ENST00000535648 ATXN8OSP0DMR3 200 aa10.48□□□□□ -0.73
TNC-210ENST00000535648 OAS2P29728 719 aaKnown RBP10.48□□□□□ -0.73
TNC-210ENST00000535648 KCNJ12Q14500 433 aa10.48□□□□□ -0.73
TNC-210ENST00000535648 WHAMMP3Q1A5X7 153 aa10.48□□□□□ -0.73
TNC-210ENST00000535648 GAS2L3Q86XJ1 694 aa10.48□□□□□ -0.73
TNC-210ENST00000535648 CPXCR1Q8N123 301 aa10.48□□□□□ -0.73
TNC-210ENST00000535648 TMEM63CQ9P1W3 806 aa10.48□□□□□ -0.73
TNC-210ENST00000535648 SMCO2A6NFE2 343 aa10.47□□□□□ -0.73
TNC-210ENST00000535648 KRT71Q3SY84 523 aa10.47□□□□□ -0.73
TNC-210ENST00000535648 LARGE2Q8N3Y3 721 aa10.47□□□□□ -0.73
TNC-210ENST00000535648 KLHDC4Q8TBB5 520 aa10.47□□□□□ -0.73
TNC-210ENST00000535648 OTUD7AQ8TE49 926 aaPredicted RBP10.47□□□□□ -0.73
TNC-210ENST00000535648 PTPRKQ15262 1439 aa10.47□□□□□ -0.73
TNC-210ENST00000535648 USP19O94966 1318 aa10.47□□□□□ -0.73
TNC-210ENST00000535648 LPXNO60711 386 aa10.47□□□□□ -0.73
TNC-210ENST00000535648 MAN1A1P33908 653 aa10.47□□□□□ -0.73
TNC-210ENST00000535648 PPARAQ07869 468 aa10.47□□□□□ -0.73
TNC-210ENST00000535648 ADALQ6DHV7 355 aa10.47□□□□□ -0.73
TNC-210ENST00000535648 DEPTORQ8TB45 409 aa10.47□□□□□ -0.73
TNC-210ENST00000535648 FAM207AQ9NSI2 230 aaPredicted RBP10.47□□□□□ -0.73
TNC-210ENST00000535648 TRAPPC8Q9Y2L5 1435 aa10.47□□□□□ -0.73
TNC-210ENST00000535648 STAM2O75886 525 aa10.47□□□□□ -0.73
TNC-210ENST00000535648 TFAP4Q01664 338 aa10.47□□□□□ -0.73
TNC-210ENST00000535648 TCP10Q12799 353 aa10.47□□□□□ -0.73
TNC-210ENST00000535648 MORC3Q14149 939 aa10.47□□□□□ -0.73
TNC-210ENST00000535648 TM6SF1Q9BZW5 370 aa10.47□□□□□ -0.73
TNC-210ENST00000535648 LMTK3Q96Q04 1460 aa10.47□□□□□ -0.73
TNC-210ENST00000535648 ZAP70P43403 619 aa10.47□□□□□ -0.73
TNC-210ENST00000535648 SND1Q7KZF4 910 aaKnown RBP eCLIP10.47□□□□□ -0.73
TNC-210ENST00000535648 MIER3Q7Z3K6 550 aa10.47□□□□□ -0.73
TNC-210ENST00000535648 MAPKAPK5Q8IW41 473 aa10.47□□□□□ -0.73
TNC-210ENST00000535648 HVCN1Q96D96 273 aa10.47□□□□□ -0.73
TNC-210ENST00000535648 AS3MTQ9HBK9 375 aa10.47□□□□□ -0.73
TNC-210ENST00000535648 RIC8AQ9NPQ8 531 aa10.47□□□□□ -0.73
TNC-210ENST00000535648 TYW1Q9NV66 732 aaKnown RBP10.47□□□□□ -0.73
TNC-210ENST00000535648 DDX41Q9UJV9 622 aaKnown RBP10.47□□□□□ -0.73
TNC-210ENST00000535648 NUP153P49790 1475 aaKnown RBP10.47□□□□□ -0.73
TNC-210ENST00000535648 GNPTABQ3T906 1256 aa10.47□□□□□ -0.73
TNC-210ENST00000535648 CCDC38Q502W7 563 aa10.47□□□□□ -0.73
TNC-210ENST00000535648 ARHGEF16Q5VV41 709 aa10.47□□□□□ -0.73
TNC-210ENST00000535648 GPBP1Q86WP2 473 aa10.47□□□□□ -0.73
TNC-210ENST00000535648 CHURC1Q8WUH1 139 aa10.47□□□□□ -0.73
TNC-210ENST00000535648 ZNF274Q96GC6 653 aaPredicted RBP10.47□□□□□ -0.73
TNC-210ENST00000535648 KDM5DQ9BY66 1539 aa10.47□□□□□ -0.73
TNC-210ENST00000535648 GOLGA8KD6RF30 607 aa10.47□□□□□ -0.73
TNC-210ENST00000535648 GADD45BO75293 160 aaPredicted RBP10.47□□□□□ -0.73
TNC-210ENST00000535648 STX2P32856 288 aa10.47□□□□□ -0.73
TNC-210ENST00000535648 RPS6KA2Q15349 733 aa10.47□□□□□ -0.73
TNC-210ENST00000535648 OTUD7BQ6GQQ9 843 aa10.47□□□□□ -0.73
TNC-210ENST00000535648 MYOCDQ8IZQ8 938 aa10.47□□□□□ -0.73
TNC-210ENST00000535648 ZNF277Q9NRM2 450 aaPredicted RBP10.47□□□□□ -0.73
TNC-210ENST00000535648 FAM114A2Q9NRY5 505 aa10.47□□□□□ -0.73
TNC-210ENST00000535648 TXNDC9O14530 226 aa10.46□□□□□ -0.73
TNC-210ENST00000535648 ATP5JP18859 108 aa10.46□□□□□ -0.73
TNC-210ENST00000535648 HADHQ16836 314 aaKnown RBP10.46□□□□□ -0.73
TNC-210ENST00000535648 FAM102BQ5T8I3 360 aa10.46□□□□□ -0.73
TNC-210ENST00000535648 U2AF1L4Q8WU68 220 aaKnown RBP10.46□□□□□ -0.73
TNC-210ENST00000535648 TESK2Q96S53 571 aa10.46□□□□□ -0.73
TNC-210ENST00000535648 SLC5A4Q9NY91 659 aa10.46□□□□□ -0.73
TNC-210ENST00000535648 BIRC2Q13490 618 aa10.46□□□□□ -0.73
TNC-210ENST00000535648 MUM1L1Q5H9M0 696 aa10.46□□□□□ -0.73
TNC-210ENST00000535648 MED10Q9BTT4 135 aa10.46□□□□□ -0.73
TNC-210ENST00000535648 WDR62O43379 1518 aa10.46□□□□□ -0.73
TNC-210ENST00000535648 H0YCG3 227 aa10.46□□□□□ -0.73
TNC-210ENST00000535648 CTNNA1P35221 906 aaKnown RBP10.46□□□□□ -0.73
TNC-210ENST00000535648 TRIM50Q86XT4 487 aa10.46□□□□□ -0.73
TNC-210ENST00000535648 MGARPQ8TDB4 240 aa10.46□□□□□ -0.73
TNC-210ENST00000535648 ZSCAN10Q96SZ4 725 aaPredicted RBP10.46□□□□□ -0.73
TNC-210ENST00000535648 SERTAD1Q9UHV2 236 aa10.46□□□□□ -0.73
TNC-210ENST00000535648 NCKAP5LQ9HCH0 1330 aa10.46□□□□□ -0.73
TNC-210ENST00000535648 POLR1AO95602 1720 aaPredicted RBP10.46□□□□□ -0.74
TNC-210ENST00000535648 CHL1O00533 1208 aa10.46□□□□□ -0.74
TNC-210ENST00000535648 HGSO14964 777 aaPredicted RBP10.46□□□□□ -0.74
TNC-210ENST00000535648 RSPH3Q86UC2 560 aa10.46□□□□□ -0.74
TNC-210ENST00000535648 NIM1KQ8IY84 436 aa10.46□□□□□ -0.74
TNC-210ENST00000535648 CCDC13Q8IYE1 715 aa10.46□□□□□ -0.74
TNC-210ENST00000535648 MIS12Q9H081 205 aa10.46□□□□□ -0.74
TNC-210ENST00000535648 PANK4Q9NVE7 773 aa10.46□□□□□ -0.74
TNC-210ENST00000535648 ZMYM6O95789 1325 aa10.46□□□□□ -0.74
TNC-210ENST00000535648 EFCAB8A8MWE9 144 aa10.46□□□□□ -0.74
TNC-210ENST00000535648 HMGB1P1B2RPK0 211 aaPredicted RBP10.46□□□□□ -0.74
TNC-210ENST00000535648 JAK2O60674 1132 aa10.46□□□□□ -0.74
TNC-210ENST00000535648 BRD1O95696 1058 aa10.46□□□□□ -0.74
TNC-210ENST00000535648 CTSWP56202 376 aa10.46□□□□□ -0.74
TNC-210ENST00000535648 GALNT17Q6IS24 598 aa10.46□□□□□ -0.74
TNC-210ENST00000535648 NSMFQ6X4W1 530 aa10.46□□□□□ -0.74
TNC-210ENST00000535648 OR8K1Q8NGG5 319 aa10.46□□□□□ -0.74
TNC-210ENST00000535648 KRIT1O00522 736 aa10.46□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms