RNA–Protein interactions for RNA: ENST00000535565.6

RBFOX1-206, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 2 BASIC

Gene RBFOX1, Length 1,599 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-206ENST00000535565 AIFM3Q96NN9 605 aa26.53■■□□□ 1.84
RBFOX1-206ENST00000535565 FRMD4AQ9P2Q2 1039 aaPredicted RBP26.53■■□□□ 1.84
RBFOX1-206ENST00000535565 ISY1Q9ULR0 285 aaKnown RBP26.53■■□□□ 1.84
RBFOX1-206ENST00000535565 NDUFB10O96000 172 aa26.52■■□□□ 1.84
RBFOX1-206ENST00000535565 ECE1P42892 770 aa26.52■■□□□ 1.84
RBFOX1-206ENST00000535565 ACER1Q8TDN7 264 aa26.52■■□□□ 1.84
RBFOX1-206ENST00000535565 GPCPD1Q9NPB8 672 aa26.52■■□□□ 1.84
RBFOX1-206ENST00000535565 GUCY1B3Q02153 619 aa26.51■■□□□ 1.83
RBFOX1-206ENST00000535565 FEZ1Q99689 392 aa26.51■■□□□ 1.83
RBFOX1-206ENST00000535565 GLIS2Q9BZE0 524 aaPredicted RBP26.51■■□□□ 1.83
RBFOX1-206ENST00000535565 OTOFQ9HC10 1997 aa26.51■■□□□ 1.83
RBFOX1-206ENST00000535565 PAPPA2Q9BXP8 1791 aa26.51■■□□□ 1.83
RBFOX1-206ENST00000535565 UBE2Q2LH0YL09 131 aa26.5■■□□□ 1.83
RBFOX1-206ENST00000535565 USP2O75604 605 aaPredicted RBP26.5■■□□□ 1.83
RBFOX1-206ENST00000535565 PRKG1Q13976 671 aa26.5■■□□□ 1.83
RBFOX1-206ENST00000535565 PKN1Q16512 942 aa26.5■■□□□ 1.83
RBFOX1-206ENST00000535565 NOL9Q5SY16 702 aaKnown RBP26.5■■□□□ 1.83
RBFOX1-206ENST00000535565 KCTD1Q719H9 257 aa26.5■■□□□ 1.83
RBFOX1-206ENST00000535565 DDX55Q8NHQ9 600 aaKnown RBP eCLIP26.5■■□□□ 1.83
RBFOX1-206ENST00000535565 ZKSCAN4Q969J2 545 aaPredicted RBP26.5■■□□□ 1.83
RBFOX1-206ENST00000535565 ZSCAN16Q9H4T2 348 aaPredicted RBP26.5■■□□□ 1.83
RBFOX1-206ENST00000535565 AS3MTQ9HBK9 375 aa26.5■■□□□ 1.83
RBFOX1-206ENST00000535565 FZD1Q9UP38 647 aa26.5■■□□□ 1.83
RBFOX1-206ENST00000535565 MYH15Q9Y2K3 1946 aa26.5■■□□□ 1.83
RBFOX1-206ENST00000535565 hCG_1642624A0A1W2PR95 340 aa26.5■■□□□ 1.83
RBFOX1-206ENST00000535565 CYTH3O43739 400 aa26.5■■□□□ 1.83
RBFOX1-206ENST00000535565 SCG2P13521 617 aa26.5■■□□□ 1.83
RBFOX1-206ENST00000535565 IREB2P48200 963 aaKnown RBP26.5■■□□□ 1.83
RBFOX1-206ENST00000535565 PFKFB3Q16875 520 aaPredicted RBP26.5■■□□□ 1.83
RBFOX1-206ENST00000535565 KRT40Q6A162 431 aa26.5■■□□□ 1.83
RBFOX1-206ENST00000535565 MCTP1Q6DN14 999 aa26.5■■□□□ 1.83
RBFOX1-206ENST00000535565 DLK2Q6UY11 383 aa26.5■■□□□ 1.83
RBFOX1-206ENST00000535565 CLEC17AQ6ZS10 378 aa26.5■■□□□ 1.83
RBFOX1-206ENST00000535565 RRP36Q96EU6 259 aaKnown RBP26.5■■□□□ 1.83
RBFOX1-206ENST00000535565 VCPKMTQ9H867 229 aa26.5■■□□□ 1.83
RBFOX1-206ENST00000535565 SEC63Q9UGP8 760 aaKnown RBP26.5■■□□□ 1.83
RBFOX1-206ENST00000535565 PHIPQ8WWQ0 1821 aa26.49■■□□□ 1.83
RBFOX1-206ENST00000535565 BMP3P12645 472 aa26.49■■□□□ 1.83
RBFOX1-206ENST00000535565 FERMT3Q86UX7 667 aa26.49■■□□□ 1.83
RBFOX1-206ENST00000535565 PIBF1Q8WXW3 757 aa26.49■■□□□ 1.83
RBFOX1-206ENST00000535565 RIOX1Q9H6W3 641 aa26.49■■□□□ 1.83
RBFOX1-206ENST00000535565 OTUD7BQ6GQQ9 843 aa26.48■■□□□ 1.83
RBFOX1-206ENST00000535565 CCDC84Q86UT8 332 aaPredicted RBP26.48■■□□□ 1.83
RBFOX1-206ENST00000535565 UBA5Q9GZZ9 404 aa26.48■■□□□ 1.83
RBFOX1-206ENST00000535565 BAG4O95429 457 aaKnown RBP26.47■■□□□ 1.83
RBFOX1-206ENST00000535565 PTPRAP18433 802 aa26.47■■□□□ 1.83
RBFOX1-206ENST00000535565 MAP3K9P80192 1104 aa26.47■■□□□ 1.83
RBFOX1-206ENST00000535565 SLC35G1Q2M3R5 365 aa26.47■■□□□ 1.83
RBFOX1-206ENST00000535565 LDHDQ86WU2 507 aa26.47■■□□□ 1.83
RBFOX1-206ENST00000535565 KIAA1683Q9H0B3 1180 aa26.47■■□□□ 1.83
RBFOX1-206ENST00000535565 CPVLQ9H3G5 476 aa26.47■■□□□ 1.83
RBFOX1-206ENST00000535565 GJB4Q9NTQ9 266 aa26.47■■□□□ 1.83
RBFOX1-206ENST00000535565 CSADQ9Y600 493 aa26.47■■□□□ 1.83
RBFOX1-206ENST00000535565 POTEIP0CG38 1075 aa26.46■■□□□ 1.83
RBFOX1-206ENST00000535565 POTEJP0CG39 1038 aa26.46■■□□□ 1.83
RBFOX1-206ENST00000535565 SAFBQ15424 915 aaKnown RBP eCLIP26.46■■□□□ 1.83
RBFOX1-206ENST00000535565 ZYXQ15942 572 aaKnown RBP26.46■■□□□ 1.83
RBFOX1-206ENST00000535565 SPICE1Q8N0Z3 855 aa26.46■■□□□ 1.83
RBFOX1-206ENST00000535565 WDR18Q9BV38 432 aa26.46■■□□□ 1.83
RBFOX1-206ENST00000535565 VAT1LQ9HCJ6 419 aa26.46■■□□□ 1.83
RBFOX1-206ENST00000535565 RESTQ13127 1097 aa26.46■■□□□ 1.83
RBFOX1-206ENST00000535565 TTLL12Q14166 644 aaPredicted RBP26.46■■□□□ 1.83
RBFOX1-206ENST00000535565 MAP1SQ66K74 1059 aaPredicted RBP26.46■■□□□ 1.83
RBFOX1-206ENST00000535565 TTBK2Q6IQ55 1244 aa26.46■■□□□ 1.83
RBFOX1-206ENST00000535565 NUP88Q99567 741 aaPredicted RBP26.46■■□□□ 1.83
RBFOX1-206ENST00000535565 TCHHQ07283 1943 aa26.45■■□□□ 1.82
RBFOX1-206ENST00000535565 USP17L10C9JJH3 530 aa26.45■■□□□ 1.82
RBFOX1-206ENST00000535565 MMP1P03956 469 aa26.45■■□□□ 1.82
RBFOX1-206ENST00000535565 USP14P54578 494 aa26.45■■□□□ 1.82
RBFOX1-206ENST00000535565 IKQ13123 557 aaPredicted RBP26.45■■□□□ 1.82
RBFOX1-206ENST00000535565 GNL2Q13823 731 aaKnown RBP26.45■■□□□ 1.82
RBFOX1-206ENST00000535565 NFKBIBQ15653 356 aa26.45■■□□□ 1.82
RBFOX1-206ENST00000535565 HOMER1Q86YM7 354 aa26.45■■□□□ 1.82
RBFOX1-206ENST00000535565 ADGRF4Q8IZF3 695 aa26.45■■□□□ 1.82
RBFOX1-206ENST00000535565 LPAR1Q92633 364 aa26.45■■□□□ 1.82
RBFOX1-206ENST00000535565 SH3GLB2Q9NR46 395 aa26.45■■□□□ 1.82
RBFOX1-206ENST00000535565 VPS54Q9P1Q0 977 aa26.45■■□□□ 1.82
RBFOX1-206ENST00000535565 GOLGA6L22H0YM25 854 aa26.44■■□□□ 1.82
RBFOX1-206ENST00000535565 SLC16A2P36021 539 aa26.44■■□□□ 1.82
RBFOX1-206ENST00000535565 VGLL4Q14135 290 aa26.44■■□□□ 1.82
RBFOX1-206ENST00000535565 ZNF280CQ8ND82 737 aa26.44■■□□□ 1.82
RBFOX1-206ENST00000535565 ZNF526Q8TF50 670 aaPredicted RBP26.44■■□□□ 1.82
RBFOX1-206ENST00000535565 PIGSQ96S52 555 aa26.44■■□□□ 1.82
RBFOX1-206ENST00000535565 NMRK2Q9NPI5 230 aa26.44■■□□□ 1.82
RBFOX1-206ENST00000535565 TMEM232C9JQI7 657 aa26.43■■□□□ 1.82
RBFOX1-206ENST00000535565 FOXD4L6Q3SYB3 417 aaPredicted RBP26.43■■□□□ 1.82
RBFOX1-206ENST00000535565 FOXD4L3Q6VB84 417 aaPredicted RBP26.43■■□□□ 1.82
RBFOX1-206ENST00000535565 PPP1R3FQ6ZSY5 799 aaPredicted RBP26.43■■□□□ 1.82
RBFOX1-206ENST00000535565 ARMC9Q7Z3E5 817 aa26.43■■□□□ 1.82
RBFOX1-206ENST00000535565 FAM177A1Q8N128 213 aaPredicted RBP26.43■■□□□ 1.82
RBFOX1-206ENST00000535565 JMJD4Q9H9V9 463 aa26.43■■□□□ 1.82
RBFOX1-206ENST00000535565 KCNJ14Q9UNX9 436 aa26.43■■□□□ 1.82
RBFOX1-206ENST00000535565 ZHX2Q9Y6X8 837 aa26.43■■□□□ 1.82
RBFOX1-206ENST00000535565 hCG_1984214I3L0E3 225 aa26.42■■□□□ 1.82
RBFOX1-206ENST00000535565 STAT2P52630 851 aa26.42■■□□□ 1.82
RBFOX1-206ENST00000535565 KIF23Q02241 960 aaPredicted RBP26.42■■□□□ 1.82
RBFOX1-206ENST00000535565 SPP2Q13103 211 aa26.42■■□□□ 1.82
RBFOX1-206ENST00000535565 MAP3K11Q16584 847 aa26.42■■□□□ 1.82
RBFOX1-206ENST00000535565 KIAA1755Q5JYT7 1200 aa26.42■■□□□ 1.82
RBFOX1-206ENST00000535565 FAM83BQ5T0W9 1011 aa26.42■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms