RNA–Protein interactions for RNA: ENST00000535399.1

SFSWAP-204, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 778 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-204ENST00000535399 ZKSCAN3Q9BRR0 538 aa26.78■■□□□ 1.88
SFSWAP-204ENST00000535399 ZSWIM8A7E2V4 1837 aa26.77■■□□□ 1.88
SFSWAP-204ENST00000535399 E7EWF7 191 aa26.77■■□□□ 1.88
SFSWAP-204ENST00000535399 IQCA1Q86XH1 822 aa26.77■■□□□ 1.88
SFSWAP-204ENST00000535399 ABHD8Q96I13 439 aa26.77■■□□□ 1.88
SFSWAP-204ENST00000535399 GMCL1Q96IK5 515 aa26.77■■□□□ 1.88
SFSWAP-204ENST00000535399 PPP1R9AQ9ULJ8 1098 aa26.77■■□□□ 1.88
SFSWAP-204ENST00000535399 ADAMTS5Q9UNA0 930 aa26.77■■□□□ 1.88
SFSWAP-204ENST00000535399 SLC27A2O14975 620 aa26.76■■□□□ 1.87
SFSWAP-204ENST00000535399 CYB5R4Q7L1T6 521 aa26.76■■□□□ 1.87
SFSWAP-204ENST00000535399 DGKHQ86XP1 1220 aa26.76■■□□□ 1.87
SFSWAP-204ENST00000535399 ANKS1AQ92625 1134 aa26.76■■□□□ 1.87
SFSWAP-204ENST00000535399 SRRDQ9UH36 339 aa26.76■■□□□ 1.87
SFSWAP-204ENST00000535399 TNPO2O14787 897 aaKnown RBP26.75■■□□□ 1.87
SFSWAP-204ENST00000535399 BMP3P12645 472 aa26.75■■□□□ 1.87
SFSWAP-204ENST00000535399 MCCP23508 829 aa26.75■■□□□ 1.87
SFSWAP-204ENST00000535399 HOXD10P28358 340 aa26.75■■□□□ 1.87
SFSWAP-204ENST00000535399 TRDNQ13061 729 aa26.75■■□□□ 1.87
SFSWAP-204ENST00000535399 CCDC178Q5BJE1 867 aa26.75■■□□□ 1.87
SFSWAP-204ENST00000535399 CREB3L3Q68CJ9 461 aa26.75■■□□□ 1.87
SFSWAP-204ENST00000535399 SAMD1Q6SPF0 538 aaPredicted RBP26.75■■□□□ 1.87
SFSWAP-204ENST00000535399 RASGRP2Q7LDG7 609 aa26.75■■□□□ 1.87
SFSWAP-204ENST00000535399 MB21D1Q8N884 522 aa26.75■■□□□ 1.87
SFSWAP-204ENST00000535399 ZSCAN10Q96SZ4 725 aaPredicted RBP26.75■■□□□ 1.87
SFSWAP-204ENST00000535399 PORCNQ9H237 461 aa26.75■■□□□ 1.87
SFSWAP-204ENST00000535399 HPS5Q9UPZ3 1129 aa26.75■■□□□ 1.87
SFSWAP-204ENST00000535399 RLFQ13129 1914 aa26.75■■□□□ 1.87
SFSWAP-204ENST00000535399 SLC1A4P43007 532 aa26.74■■□□□ 1.87
SFSWAP-204ENST00000535399 PRMT2P55345 433 aa26.74■■□□□ 1.87
SFSWAP-204ENST00000535399 IFFO2Q5TF58 517 aa26.74■■□□□ 1.87
SFSWAP-204ENST00000535399 SLF1Q9BQI6 1058 aa26.74■■□□□ 1.87
SFSWAP-204ENST00000535399 FEM1BQ9UK73 627 aa26.74■■□□□ 1.87
SFSWAP-204ENST00000535399 PTCH2Q9Y6C5 1203 aa26.74■■□□□ 1.87
SFSWAP-204ENST00000535399 MYH4Q9Y623 1939 aa26.74■■□□□ 1.87
SFSWAP-204ENST00000535399 PRKCZQ05513 592 aa26.73■■□□□ 1.87
SFSWAP-204ENST00000535399 ENAHQ8N8S7 591 aaPredicted RBP26.73■■□□□ 1.87
SFSWAP-204ENST00000535399 NCOA7Q8NI08 942 aa26.73■■□□□ 1.87
SFSWAP-204ENST00000535399 CHMP4CQ96CF2 233 aa26.73■■□□□ 1.87
SFSWAP-204ENST00000535399 GABRQQ9UN88 632 aa26.73■■□□□ 1.87
SFSWAP-204ENST00000535399 HTTP42858 3142 aa26.73■■□□□ 1.87
SFSWAP-204ENST00000535399 TNKSO95271 1327 aa26.72■■□□□ 1.87
SFSWAP-204ENST00000535399 VWA5AO00534 786 aa26.72■■□□□ 1.87
SFSWAP-204ENST00000535399 CCNA1P78396 465 aa26.72■■□□□ 1.87
SFSWAP-204ENST00000535399 REPS2Q8NFH8 660 aa26.72■■□□□ 1.87
SFSWAP-204ENST00000535399 DCAF4Q8WV16 495 aa26.72■■□□□ 1.87
SFSWAP-204ENST00000535399 UBAC1Q9BSL1 405 aa26.72■■□□□ 1.87
SFSWAP-204ENST00000535399 MTMR7Q9Y216 660 aa26.72■■□□□ 1.87
SFSWAP-204ENST00000535399 MAPK4P31152 587 aa26.71■■□□□ 1.87
SFSWAP-204ENST00000535399 TMEM132BQ14DG7 1078 aa26.71■■□□□ 1.87
SFSWAP-204ENST00000535399 RALYLQ86SE5 291 aaKnown RBP26.71■■□□□ 1.87
SFSWAP-204ENST00000535399 MB21D2Q8IYB1 491 aaPredicted RBP26.71■■□□□ 1.87
SFSWAP-204ENST00000535399 PRPF38AQ8NAV1 312 aaKnown RBP26.71■■□□□ 1.87
SFSWAP-204ENST00000535399 COA7Q96BR5 231 aa26.71■■□□□ 1.87
SFSWAP-204ENST00000535399 SPATC1LQ9H0A9 340 aa26.71■■□□□ 1.87
SFSWAP-204ENST00000535399 TMEM232C9JQI7 657 aa26.7■■□□□ 1.86
SFSWAP-204ENST00000535399 SEC23AQ15436 765 aa26.7■■□□□ 1.86
SFSWAP-204ENST00000535399 KCTD1Q719H9 257 aa26.7■■□□□ 1.86
SFSWAP-204ENST00000535399 KIFC2Q96AC6 838 aa26.7■■□□□ 1.86
SFSWAP-204ENST00000535399 MOV10L1Q9BXT6 1211 aaKnown RBP26.7■■□□□ 1.86
SFSWAP-204ENST00000535399 GJD2Q9UKL4 321 aa26.7■■□□□ 1.86
SFSWAP-204ENST00000535399 A0A0G2JMZ2 1700 aa26.69■■□□□ 1.86
SFSWAP-204ENST00000535399 PLA2G6O60733 806 aa26.69■■□□□ 1.86
SFSWAP-204ENST00000535399 PDHBP11177 359 aa26.69■■□□□ 1.86
SFSWAP-204ENST00000535399 FLT3LGP49771 235 aa26.69■■□□□ 1.86
SFSWAP-204ENST00000535399 FAM160B2Q86V87 743 aa26.69■■□□□ 1.86
SFSWAP-204ENST00000535399 ISY1Q9ULR0 285 aaKnown RBP26.69■■□□□ 1.86
SFSWAP-204ENST00000535399 SNHG28P0DPA3 235 aa26.68■■□□□ 1.86
SFSWAP-204ENST00000535399 STAT2P52630 851 aa26.68■■□□□ 1.86
SFSWAP-204ENST00000535399 ANTXR2P58335 489 aa26.68■■□□□ 1.86
SFSWAP-204ENST00000535399 CCDC96Q2M329 555 aa26.68■■□□□ 1.86
SFSWAP-204ENST00000535399 RNF20Q5VTR2 975 aa26.68■■□□□ 1.86
SFSWAP-204ENST00000535399 GPR142Q7Z601 462 aa26.68■■□□□ 1.86
SFSWAP-204ENST00000535399 PLEKHH3Q7Z736 793 aa26.68■■□□□ 1.86
SFSWAP-204ENST00000535399 CCAR1Q8IX12 1150 aaKnown RBP26.68■■□□□ 1.86
SFSWAP-204ENST00000535399 PNMA1Q8ND90 353 aa26.68■■□□□ 1.86
SFSWAP-204ENST00000535399 CHURC1Q8WUH1 139 aa26.68■■□□□ 1.86
SFSWAP-204ENST00000535399 KAT14Q9H8E8 782 aa26.68■■□□□ 1.86
SFSWAP-204ENST00000535399 ZNF214Q9UL59 606 aaPredicted RBP26.68■■□□□ 1.86
SFSWAP-204ENST00000535399 IRF5Q13568 498 aa26.67■■□□□ 1.86
SFSWAP-204ENST00000535399 COL9A3Q14050 684 aaPredicted RBP26.67■■□□□ 1.86
SFSWAP-204ENST00000535399 PLS1Q14651 629 aa26.67■■□□□ 1.86
SFSWAP-204ENST00000535399 SHCBP1Q8NEM2 672 aa26.67■■□□□ 1.86
SFSWAP-204ENST00000535399 RAET1EQ8TD07 263 aa26.67■■□□□ 1.86
SFSWAP-204ENST00000535399 SLC38A10Q9HBR0 1119 aa26.67■■□□□ 1.86
SFSWAP-204ENST00000535399 REC8O95072 547 aa26.66■■□□□ 1.86
SFSWAP-204ENST00000535399 ZNF543Q08ER8 600 aa26.66■■□□□ 1.86
SFSWAP-204ENST00000535399 TSGA10IPQ3SY00 556 aa26.66■■□□□ 1.86
SFSWAP-204ENST00000535399 IFIT1BQ5T764 474 aaKnown RBP26.66■■□□□ 1.86
SFSWAP-204ENST00000535399 TTBK2Q6IQ55 1244 aa26.66■■□□□ 1.86
SFSWAP-204ENST00000535399 CHST3Q7LGC8 479 aa26.66■■□□□ 1.86
SFSWAP-204ENST00000535399 RASEFQ8IZ41 740 aa26.66■■□□□ 1.86
SFSWAP-204ENST00000535399 PARP14Q460N5 1801 aa26.66■■□□□ 1.86
SFSWAP-204ENST00000535399 MGAMO43451 1857 aa26.66■■□□□ 1.86
SFSWAP-204ENST00000535399 FRMPD2Q68DX3 1309 aaPredicted RBP26.65■■□□□ 1.86
SFSWAP-204ENST00000535399 IFIT3O14879 490 aaKnown RBP26.65■■□□□ 1.86
SFSWAP-204ENST00000535399 ERCC3P19447 782 aa26.65■■□□□ 1.86
SFSWAP-204ENST00000535399 STAT3P40763 770 aa26.65■■□□□ 1.86
SFSWAP-204ENST00000535399 IKQ13123 557 aaPredicted RBP26.65■■□□□ 1.86
SFSWAP-204ENST00000535399 MORN1Q5T089 497 aa26.65■■□□□ 1.86
SFSWAP-204ENST00000535399 BTNL9Q6UXG8 535 aa26.65■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms